| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 910,671 | T→G | 12.3% | intergenic (‑358/+137) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 910,671 | 0 | T | G | 12.3% | 351.9 / 11.9 | 159 | intergenic (‑358/+137) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base T (104/32); new base G (2/21); total (106/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.84e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 166 total aligned reads displayed.
GGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTT > CP009273/910522‑910820 | ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt < 2:1686888/150‑1 (MQ=32)ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt > 1:4509207/1‑150 (MQ=32)ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt > 1:4509163/1‑150 (MQ=32)ggggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAtt > 1:4049125/1‑150 (MQ=32) gggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTg > 2:489910/1‑150 (MQ=32) ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 1:1042246/1‑150 (MQ=32) ggCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg > 1:2530302/1‑150 (MQ=32) gCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑c > 2:3709587/1‑150 (MQ=32) aGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑ccg < 2:1810237/150‑1 (MQ=32) cccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGg‑ccgcc < 1:2988088/150‑1 (MQ=32) ccACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGccc < 2:3718062/150‑1 (MQ=32) cacaTGGATGTGGGCTGAGGGCGCGTTGTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGcccc < 1:2606419/150‑1 (MQ=17) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑Tg < 2:930734/150‑1 (MQ=32) aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑Tg < 1:302359/150‑1 (MQ=32) tGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑GCGCCCC‑C‑Ag‑c > 1:1194355/1‑150 (MQ=12) aTGTGGGCTGAGGGCGCGTTTTACAGGCATGTTACCTCGCGCCCGACCCGGGAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑Tg‑cgcg < 2:3774509/150‑1 (MQ=17) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑GCGCCCC‑C‑TG‑CGCGGTccat > 1:551507/1‑148 (MQ=12) tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTgc > 2:4287782/1‑150 (MQ=32) gggCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGcc > 1:165797/1‑150 (MQ=32) gggCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑AG‑CGCGCTCCGTGCGcc > 1:2391552/1‑150 (MQ=17) cgcgTTTAACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGt > 2:3857486/1‑150 (MQ=17) gggTTTTACTGGGTTTTTCCCCCGCGCCCCACCGGGTCGCGGTATGGGTTATGTGGGGGCCCCCGCGCTGCGCCTTTTTGGTCCGCCCGCCCCGGGGGGGGCGGGGGGCGGCGGC‑TTTGG‑CCCCCCC‑C‑CGCCGCGCTCCTTGCGCCAGTg < 2:1868872/148‑1 (MQ=2) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGc > 2:3882103/1‑150 (MQ=33) ttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑CCGCCCC‑C‑AG‑CGCGCTCCGTGCGCCCGTGGCAat > 1:3248690/1‑150 (MQ=255) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATg > 1:2942178/1‑150 (MQ=38) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑GG‑CGCGCTCCATGCGCCAGTGGCAATATGt > 1:1238166/1‑150 (MQ=255) cttggtACCTCGCGCCCGACCCTTTAGCTTTTTGTTATATGCCGTGGTCACCGCGCAGGGGCTTTTTTGTTCGAAAGCGCCCGGGGGTCATGGGGGGGGTGGGTTTGGG‑CCGCCCC‑C‑TC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGc < 2:1484244/145‑1 (MQ=2) aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCATGCGCCAGTTGCAATATGTTTCt > 1:3084409/1‑150 (MQ=255) ttttACCTCGCCCCCGCCGGGTTCGCCTTAGGGTATTCGTGGGGGGCCCCGCGCGGGGGTTTTTTTGTTCGCCTGCGCGGGGGGGGGCGGGGGGGGGCGGCGTTGGG‑CCCCCCC‑C‑TC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt < 2:2933542/148‑1 (MQ=255) tGTTCCCTCGCGCCCGCCCGGTTCCCCTTATGGTATACGTCGTGGCCCCCGCGCCGGGGCTTTTTTGTCCGCCTGCCCCGGGGGGTGCGGGGGGCGGCGGCTTTGGG‑CCCCCCC‑C‑TC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt < 2:725611/150‑1 (MQ=255) tGTTCCCTCGCGCCCCACCGGGTCGCGTTCTGGTATTCGTGGGGGCCACCGCGCCGCGGCTTTTTTGTTCGCCCGCGCCGGGGGGGGCGGGGGGGGGCGGCGTTGGG‑CCCCCCC‑C‑CC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt < 2:1880113/150‑1 (MQ=255) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAATTCGAGGGCACCGCGAAGCGGCGATTTTGTTAGCCAGAGCCCCGGGGTGCAGGGGGCGGCGGCGATGTG‑CCGCCCC‑C‑AG‑CGCGCTCCATGCGCCAGTGGCAAAATTTTTCTTAGc > 2:2336548/1‑150 (MQ=11) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGCTTTAGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGG‑CCGCCCC‑C‑TG‑CGCCCTCCTTGCGCCAGTGGCAATATGTTGCTTAGc > 2:2336549/1‑150 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGG‑CCGCCCC‑C‑TG‑CGCGCACCTTGCGCCAGTGGCAAAATGTTTCTTATCTCATGa > 1:4363702/1‑150 (MQ=14) cccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAg > 1:3686728/1‑150 (MQ=255) ccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTGGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAgg > 1:1355743/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 2:266782/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 2:785366/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 2:801451/1‑150 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgc > 1:1107740/1‑150 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGAGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgc > 2:2237142/1‑150 (MQ=255) cccGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg > 2:2627941/1‑150 (MQ=255) gTAGCCTTATGGGATAAGTCGTGGGCCCCGCGCGGCGGCTATTTTGTTCGCCTGAGCCGGGGGTTGCTGGGGGCGGCGGCGTTTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGcaac < 2:3045904/150‑1 (MQ=17) aGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGcaacaa > 2:2940165/1‑150 (MQ=255) ccGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGG‑CCGCCCC‑C‑GG‑CGCGCTCCGTGCGCCAGGGGCAATATGTTGCATAGCTCATGAAAGGCGCGCAACAAga > 1:176018/1‑150 (MQ=17) cGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:1448902/1‑150 (MQ=255) tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCa > 2:2863438/1‑150 (MQ=255) tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCa > 2:981714/1‑150 (MQ=255) aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa > 2:1591333/1‑150 (MQ=255) cgTCGTGGCCACCGCGCTGCGGTTTTTTTGTCCGCCTGCGCGGGGGGGTGCTGGGGGCGG‑GGGGTTTGGCCCCCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAc < 2:1046653/149‑1 (MQ=18) aGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGCTTGG‑CCCCCCC‑C‑AG‑CGCGCGCCTTGCGCCAGTGGCAATAAGTTGGTTAGCTCAGGAAAGGGGCGCAACAAAAAGTTGAATCAAc > 1:388455/1‑150 (MQ=17) cGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCCGTGGCAATAAGTTGCTTAGCTCCTGAAAGGAGCGCAACAAGATGATGAATCAACata > 2:1563597/1‑150 (MQ=255) gtggccACCGCGCTGCGGTTTTTTTGTCCCCTTGCGCGGGGGGGTTTTGGGGGCGGGGGCTTTTGC‑CCCCCCC‑G‑GC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACatat < 2:1798972/145‑1 (MQ=255) gAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGGGGCGGCGAGTGG‑GCGCCCC‑C‑AG‑CGCCCTCCTTGCGCCAGTGGCAATATGTTTGATATGTCAAGTAAGGAGCGCAACAACATGAAGAAAAAACataa > 1:921174/1‑149 (MQ=14) gAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTTG‑CCGCCCC‑C‑AG‑CGCGCTCCGTGCGCCAGTGGCAATATGTTGCTTAGCGCATGTAAGGCGCGCAACAAGATGATGAATAAACatat > 1:920794/1‑150 (MQ=18) gAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCGTGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACaaat > 1:3330088/1‑150 (MQ=255) aGGGCACCGCGCAGCGGCGATGTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGTAAGGAGCGCAACAAGTTGTTGAATCAACAtata > 2:3752588/1‑150 (MQ=255) cACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaacaa > 2:2815857/1‑150 (MQ=255) cACCGCGCAGCGGCGATGTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTTG‑CCGCCCC‑C‑AG‑CGAGCAACTTGCGCCAGTTGCAATATGTTGCTTAGCTCAAGAAACGAGCGCAACAAGATGAATAAACAACATATaacaa > 2:2815823/1‑150 (MQ=18) cgcggcgTTTGTGTGCGCCTGGGCGGGGGGGGGCGGGGGGGGGGGGCGTTTGG‑CCCCCCC‑C‑GC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaa < 2:2584392/149‑1 (MQ=25) gtttttttGTGCGCCTGCGCGGGGGGGTGCGGGGGGGGGCGGC‑TTTGG‑CCCCCCC‑C‑CGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaa < 2:3281692/146‑1 (MQ=25) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 1:2629270/1‑150 (MQ=255) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 2:3181118/1‑150 (MQ=255) gATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAAGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 1:4222046/1‑150 (MQ=255) tttttGTCCCCCAGCCCCGGGGGGTGCTGGGGGGGGGGGCTATGGC‑CCCCCCC‑C‑CC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAgg < 1:1902193/149‑1 (MQ=255) ttttGTTCGCCAGCGCCGGGGGGTGCCGGGGGCGGCGGCGTTTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc < 2:4446638/150‑1 (MQ=255) tGTTCGCCAGAGCCCGGGGGTGCCGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAATGGCCTg > 2:440638/1‑150 (MQ=255) tGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTg > 2:4017367/1‑150 (MQ=255) ttCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑AG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGCTTAGCTAATGAAAGGAGCGCAACAAGATGATGTATAAACATATAACAACATCTTAAAAAAATGCCTGAc > 1:1971902/1‑150 (MQ=25) tCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa > 2:731542/1‑150 (MQ=255) tCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa > 2:132480/1‑150 (MQ=255) tCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTAATGAAAGGAGCGCAACAAGATGATGAATCAACATATAAAAACATCTTAAAAAAAGGCCTGaaa > 2:132829/1‑148 (MQ=255) gcGCCCGCGCCGGGGGGTGCTGGGGGGGGCGGCTATGGG‑CCCCCCC‑C‑TC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa < 2:354786/149‑1 (MQ=255) ccGCCAGCGCCCGGGGGGGCTGGGGGCGGGGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa < 2:3456374/149‑1 (MQ=255) cGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACAt > 2:3449931/1‑150 (MQ=255) gagCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAGAGGCCTGACATTACGc > 2:4563293/1‑150 (MQ=255) cgCCGGGGGGTGCTGGGGGGGGCGGTTTTGGG‑CCCCCCC‑C‑GC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGTGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGcc < 2:1741244/149‑1 (MQ=255) gggggggggggcgggggggggcggGGTTGGC‑CCCCCCC‑C‑CC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCa < 2:4021620/146‑1 (MQ=255) cggggggggGCTGGGGGGGGGGGCGTTGGG‑CCCCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg < 1:4180968/147‑1 (MQ=38) cGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAATGCCTGACATTACGCCAGGc > 1:4087950/1‑150 (MQ=255) cGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGc > 2:33005/1‑150 (MQ=255) ggggggGCTGGGGGGGGGGGCTTTGGG‑CCGCCCC‑G‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc < 2:2183641/150‑1 (MQ=38) gggggTGCTGGGGGGGGGGGATTTTGC‑CCGCCCC‑G‑GG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAACAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc < 2:1135596/150‑1 (MQ=255) ggggTGGGGGGGGGGGCGGCTATGGG‑CCCCCCC‑C‑TC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCt < 2:481998/150‑1 (MQ=255) gggTGCTGGGGGCGGGGGGTTTGGG‑CCGCCCC‑T‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt < 2:2219286/150‑1 (MQ=38) gggggggggggCGG‑GGGGTTTGG‑CCCCCCC‑CGCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTc < 1:613467/144‑1 (MQ=255) ggTGCTGGGGG‑GGGGGGGTTTGG‑CCCCCCC‑C‑CGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCGACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTc < 1:613533/150‑1 (MQ=255) ggggcggggggggggggggTTGC‑CCCCCCCAC‑CG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTc < 1:1797818/145‑1 (MQ=255) tggggggggCGGCGGTGTTGGC‑CCCCCCC‑C‑CC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg < 1:2420291/146‑1 (MQ=255) gtgcggggggggggggGTTTGGCCCCCCCC‑C‑TC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt < 2:210101/146‑1 (MQ=255) cAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg > 1:1593813/1‑150 (MQ=255) ggggggggggGCGTTGGG‑CCGCCCC‑C‑GG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtt < 1:358068/150‑1 (MQ=39) gggggCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtt > 2:3357200/1‑150 (MQ=255) ggcggcgATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGACAGGCCTTCTGCGttaattaa > 2:2394631/1‑150 (MQ=255) cggcgATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc > 1:3588013/1‑150 (MQ=255) ggcgATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCa > 2:358344/1‑150 (MQ=255) ggcgATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCa > 1:669404/1‑150 (MQ=255) aTTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCt > 2:569661/1‑150 (MQ=255) ttGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCANTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCAGACATTACGCCAGGCCTTCAGCGTTAATTAATCACGCtt > 1:4278901/1‑150 (MQ=255) tGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCttt > 2:3963841/1‑150 (MQ=255) | GGGGCAGCCCACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGG‑CCGCCCC‑C‑TG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTT > CP009273/910522‑910820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |