| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 910,682 | T→G | 8.5% | intergenic (‑369/+126) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 910,682 | 0 | T | G | 8.5% | 260.5 / 2.9 | 155 | intergenic (‑369/+126) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base T (86/26); new base G (4/11); total (105/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
ATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGG > CP009273/910534‑910829 | aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTg < 2:930734/150‑1 (MQ=32) gATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGGCGGCGGCGATTGG‑CCGCCCC‑CTg‑cg < 2:1529062/150‑1 (MQ=17) aTGTGGGCTGAGGGCGCGTTTTACAGGCATGTTACCTCGCGCCCGACCCGGGAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTg‑cgcg < 2:3774509/150‑1 (MQ=17) tgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTc > 2:3460758/1‑150 (MQ=32) gCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑GCGCCCC‑CTG‑CGCGGTccat > 1:551507/1‑148 (MQ=12) tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTgc > 2:4287782/1‑150 (MQ=32) cgcgTTTAACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGt > 2:3857486/1‑150 (MQ=17) gTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGc > 2:3882103/1‑150 (MQ=33) ttttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCa > 2:478020/1‑150 (MQ=34) ttACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGAGTGG‑CCGCCCC‑CAG‑CGCGCTCCGTGCGCCCGTGGCAat > 1:3248690/1‑150 (MQ=255) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCATGCGCCAGTGGCAATATg > 1:2942334/1‑150 (MQ=38) aGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CGG‑CGCGCTCCATGCGCCAGTGGCAATATGt > 1:1238166/1‑150 (MQ=255) cttggtACCTCGCGCCCGACCCTTTAGCTTTTTGTTATATGCCGTGGTCACCGCGCAGGGGCTTTTTTGTTCGAAAGCGCCCGGGGGTCAT‑GGGGGGGGTGGGTTTGGG‑CCGCCCC‑CTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGc < 2:1484244/145‑1 (MQ=2) ttttACCTCGCCCCCGCCGGGTTCGCCTTAGGGTATTCGTGGGGGGCCCCGCGCGGGGGTTTTTTTGTTCGCCTGCGCGGGGGGGGGCG‑GGGGGGGGCGGCGTTGGG‑CCCCCCC‑CTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt < 2:2933542/148‑1 (MQ=255) tGTTCCCTCGCGCCCGCCCGGTTCCCCTTATGGTATACGTCGTGGCCCCCGCGCCGGGGCTTTTTTGTCCGCCTGCCCCGGGGGGTGCG‑GGGGGCGGCGGCTTTGGG‑CCCCCCC‑CTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt < 2:725611/150‑1 (MQ=255) tGTTCCCTCGCGCCCCACCGGGTCGCGTTCTGGTATTCGTGGGGGCCACCGCGCCGCGGCTTTTTTGTTCGCCCGCGCCGGGGGGGGCG‑GGGGGGGGCGGCGTTGGG‑CCCCCCC‑CCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt < 2:1880113/150‑1 (MQ=255) tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGCTTGG‑CCGCCCC‑CTG‑CGCGCTCCGTGCGCCAGTGGCAAAATGTTGCtt > 1:4397550/1‑150 (MQ=255) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAATTCGAGGGCACCGCGAAGCGGCGATTTTGTTAGCCAGAGCCCCGGGGTGCA‑GGGGGCGGCGGCGATGTG‑CCGCCCC‑CAG‑CGCGCTCCATGCGCCAGTGGCAAAATTTTTCTTAGc > 2:2336548/1‑150 (MQ=11) tACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGCTTTAGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGAGTGG‑CCGCCCC‑CTG‑CGCCCTCCTTGCGCCAGTGGCAATATGTTGCTTAGc > 2:2336549/1‑150 (MQ=255) cccGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAg > 1:3686728/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 2:785366/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 2:801451/1‑150 (MQ=255) cGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGa > 2:266782/1‑150 (MQ=255) gACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAg > 2:1331127/1‑150 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgc > 1:1107740/1‑150 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CAG‑CGCGCTCCTTGCGCCAGTGGCAATAAGTTGCTTAGCTCATGAAAGGAgc > 1:1468680/1‑150 (MQ=255) cccGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcg > 2:2627941/1‑150 (MQ=255) cgggTCGCCTTATGGTATATGTGGTGGGCACCGCGCTGGGGCTTTTTTGTTCGCCCGAGCCGGGGGGTGCT‑GGGGGCGGGGGCGTTTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc < 2:1825794/148‑1 (MQ=17) gTAGCCTTATGGGATAAGTCGTGGGCCCCGCGCGGCGGCTATTTTGTTCGCCTGAGCCGGGGGTTGCT‑GGGGGCGGCGGCGTTTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGcaac < 2:3045904/150‑1 (MQ=17) tAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGcaaca > 2:2563588/1‑150 (MQ=255) tAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CAG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAGCGcaaca > 2:1591084/1‑150 (MQ=255) gTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg > 2:1326464/1‑150 (MQ=255) aaGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑CCGCCCC‑CAG‑CGCGCTCCTTGCGCCACTGGCAAAATGTTTCTTAGCTCATGAAAGGAGCGCAACAAaatgat > 1:486146/1‑150 (MQ=18) aaGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAAAATTTTTGTTATCTAATTAAAGGAGCGCAACAAgattat > 1:3139603/1‑150 (MQ=14) tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCa > 2:2863438/1‑150 (MQ=255) tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCa > 2:3305596/1‑150 (MQ=255) tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCa > 2:981714/1‑150 (MQ=255) aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa > 2:1591333/1‑150 (MQ=255) cgTCGTGGCCACCGCGCTGCGGTTTTTTTGTCCGCCTGCGCGGGGGGGTGCT‑GGGGGCGG‑GGGGTTTGGCCCCCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAc < 2:1046653/149‑1 (MQ=18) aGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGCTTGG‑CCCCCCC‑CAG‑CGCGCGCCTTGCGCCAGTGGCAATAAGTTGGTTAGCTCAGGAAAGGGGCGCAACAAAAAGTTGAATCAAc > 1:388455/1‑150 (MQ=17) aGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAAc > 1:1137193/1‑150 (MQ=255) gtggccACCGCGCTGCGGTTTTTTTGTCCCCTTGCGCGGGGGGGTTTT‑GGGGGCGGGGGCTTTTGC‑CCCCCCC‑GGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACatat < 2:1798972/145‑1 (MQ=255) gAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTTG‑CCGCCCC‑CAG‑CGCGCTCCGTGCGCCAGTGGCAATATGTTGCTTAGCGCATGTAAGGCGCGCAACAAGATGATGAATAAACatat > 1:920794/1‑150 (MQ=18) aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACAtata > 2:3752593/1‑150 (MQ=255) cACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaacaa > 2:2815857/1‑150 (MQ=255) cggcgATTTTGTTCGCCAGAGCCCGGGGGTGCC‑GGGGGCGGCGGCGCTTGG‑CCGCCCC‑CTG‑CGCGCGCCTTGCGCCAGTGGCAATATTTTTCTTATAGAATGAAAGGAGCGCAACAAGATGATGTAAGAACATATAAAAAACTCTTaaaa > 1:4327915/1‑150 (MQ=17) gtttttttGTGCGCCTGCGCGGGGGGGTGCG‑GGGGGGGGCGGC‑TTTGG‑CCCCCCC‑CCGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaa < 2:3281692/146‑1 (MQ=25) ggttttttGTGGGCCCGCGCCGGGGGGGGGG‑GGGGGGGGCGGCGGTGGC‑CCCCCCC‑CGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaa < 2:3656204/146‑1 (MQ=25) gATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 1:2629270/1‑150 (MQ=255) gATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAg > 1:4221977/1‑150 (MQ=255) tttttGTCCCCCAGCCCCGGGGGGTGCT‑GGGGGGGGGGGCTATGGC‑CCCCCCC‑CCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAgg < 1:1902193/149‑1 (MQ=255) tttttGGTCGCCAGCGCGGGGGGGTGCT‑GGGGGCGGCGCCTTTTGC‑CCCCCCC‑CCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAgg < 2:431989/149‑1 (MQ=255) ttttGTTCGCCAGCGCCGGGGGGTGCC‑GGGGGCGGCGGCGTTTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc < 2:4446638/150‑1 (MQ=255) ttttGTACGCCAGCGCCCGGGGGTGCT‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc < 2:764201/150‑1 (MQ=255) tGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTg > 2:4017367/1‑150 (MQ=255) ttCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CAG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGCTTAGCTAATGAAAGGAGCGCAACAAGATGATGTATAAACATATAACAACATCTTAAAAAAATGCCTGAc > 1:1971902/1‑150 (MQ=25) tCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa > 2:132480/1‑150 (MQ=255) cGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACAt > 2:3449931/1‑150 (MQ=255) cGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACAt > 2:3449978/1‑150 (MQ=255) ccAGCGCCGGGGGGTGCT‑GGGGGCGGCGGCTTTTGG‑CCGCCCC‑CTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTa < 2:2990801/150‑1 (MQ=255) agagCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CGG‑CGCGCTCCTTGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGAAGATGAATCAACAAAAAACAACAACTTAAAAAAAGGCCGGACATTACg > 1:998774/1‑150 (MQ=25) gagCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAGAGGCCTGACATTACGc > 2:4563293/1‑150 (MQ=255) cgCCGGGGGGTGCT‑GGGGGGGGCGGTTTTGGG‑CCCCCCC‑CGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGTGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGcc < 2:1741244/149‑1 (MQ=255) gggggggggggcg‑ggggggggcggGGTTGGC‑CCCCCCC‑CCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCa < 2:4021620/146‑1 (MQ=255) cggggggggGCT‑GGGGGGGGGGGCGTTGGG‑CCCCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg < 1:4180968/147‑1 (MQ=38) cccGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CAG‑CGCGCGCCTTGCGCCCGTGGCAATAAGTTGCTTAGCACAGGAAAGGAGCGCAACAAGATGATGAAACAACAAATAACAACATCTTAAAAAAAGGCCGGACCTTACGCCAg > 1:2111683/1‑150 (MQ=25) cGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAATGCCTGACATTACGCCAGGc > 1:4087950/1‑150 (MQ=255) cGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGc > 2:33005/1‑150 (MQ=255) ggggggGCT‑GGGGGGGGGGGCTTTGGG‑CCGCCCC‑GTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc < 2:2183641/150‑1 (MQ=38) gggggTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAGAGGAGCGCAACAAGATGATGAATCAACATATAACAAAATCTTAAATAAAGGCCTGACATTACGGCAGGcc > 1:1286111/1‑150 (MQ=255) gggggTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc > 2:3114987/1‑150 (MQ=255) gggTGCT‑GGGGGCGGGGGGTTTGGG‑CCGCCCC‑TTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt < 2:2219286/150‑1 (MQ=38) ggTGCT‑GGGGG‑GGGGGGGTTTGG‑CCCCCCC‑CCGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCGACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTc < 1:613533/150‑1 (MQ=255) ggggcggggggggggggggTTGC‑CCCCCCCACCG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTc < 1:1797818/145‑1 (MQ=255) tggggggggCGGCGGTGTTGGC‑CCCCCCC‑CCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg < 1:2420291/146‑1 (MQ=255) gtgcggggggggggggGTTTGGCCCCCCCC‑CTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt < 2:210101/146‑1 (MQ=255) ggcgggggggggCGGCGAGGGC‑CCCCCCC‑CCC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg < 1:2420412/146‑1 (MQ=255) cA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg > 1:1593813/1‑150 (MQ=255) ggggggggggGCGTTGGG‑CCGCCCC‑CGG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGtt < 1:358068/150‑1 (MQ=39) gggCGGCGGCCTTGGG‑CCCCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAAGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaa < 2:2800658/150‑1 (MQ=39) gcggcggcgATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaatt > 1:2688638/1‑150 (MQ=255) ggcggcgATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaattaa > 1:3039016/1‑150 (MQ=255) ggcggcgATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGACAGGCCTTCTGCGttaattaa > 2:2394631/1‑150 (MQ=255) cggcgATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATc > 1:3588013/1‑150 (MQ=255) ggcgATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCa > 1:669404/1‑150 (MQ=255) ggcgATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCa > 2:358344/1‑150 (MQ=255) aTTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCt > 2:569661/1‑150 (MQ=255) ttGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCANTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCAGACATTACGCCAGGCCTTCAGCGTTAATTAATCACGCtt > 1:4278901/1‑150 (MQ=255) tGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCttt > 2:3963841/1‑150 (MQ=255) ggg‑CCCCCCC‑CTC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATAACGCttt < 1:3066542/149‑1 (MQ=255) gcccccccc‑ccc‑cGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCtttt < 1:3340935/145‑1 (MQ=255) gcccccccc‑ccc‑cGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCtttt < 1:3340912/145‑1 (MQ=255) g‑ccgccCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTc > 2:48437/1‑150 (MQ=255) cgccCC‑ATG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCca < 2:3084409/150‑1 (MQ=255) cccccc‑cGC‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCca < 1:2251246/148‑1 (MQ=255) gccCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCcag > 1:592464/1‑150 (MQ=255) gccCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCcag > 1:594621/1‑150 (MQ=255) cccc‑cTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCcagc > 1:1729952/1‑150 (MQ=255) ccc‑cTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCcagca > 1:3884083/1‑150 (MQ=255) c‑cTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAgg > 2:1917399/1‑150 (MQ=255) | ATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCA‑GGGGGCGGCGGCGATTGG‑CCGCCCC‑CTG‑CGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTTTCCAGCAGG > CP009273/910534‑910829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |