| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,169,283 | T→A | 13.1% | A46A (GCA→GCT) | mfd ← | transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,169,283 | 0 | T | A | 13.1% | 770.4 / 88.8 | 252 | A46A (GCA→GCT) | mfd | transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base T (116/103); new base A (19/14); total (135/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 259 total aligned reads displayed.
TAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCA > CP009273/1169134‑1169431 | tAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGt < 2:3079257/150‑1 (MQ=255)tAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGt < 2:4624178/150‑1 (MQ=255)tAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGt < 2:202333/150‑1 (MQ=255)tAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGt < 1:4453076/150‑1 (MQ=255)tAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTGTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGt < 1:3318796/150‑1 (MQ=255) aaaGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTg > 2:359189/1‑150 (MQ=255) aaGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGc > 1:1069053/1‑150 (MQ=255) ggTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAAt < 2:4177087/150‑1 (MQ=255) gTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATg < 2:1353960/150‑1 (MQ=255) gTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATg < 1:4209483/150‑1 (MQ=255) aaGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTac > 1:3749647/1‑150 (MQ=255) aaGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTac > 1:2169688/1‑150 (MQ=255) aGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTacc > 2:714513/1‑150 (MQ=255) ggCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTacca < 2:1335509/150‑1 (MQ=255) cgcgAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCAACACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTTCATATCTGGTGCAATGAGTaccacc > 1:3533915/1‑150 (MQ=255) cgAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCaccgg > 2:3384761/1‑150 (MQ=255) cgAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATATCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCaccgg < 2:2525157/150‑1 (MQ=255) gaggagATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCaccgga < 2:2361317/150‑1 (MQ=255) gaggagATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCaccgga > 2:2667676/1‑150 (MQ=255) aggagATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCaccggac > 2:4173529/1‑150 (MQ=255) gaTAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGc > 1:1717502/1‑150 (MQ=255) aaTGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTg < 2:3106106/150‑1 (MQ=255) aaTGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTg > 2:2897688/1‑150 (MQ=255) gTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATTGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACg < 2:4060580/150‑1 (MQ=255) gTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACg > 1:1205866/1‑150 (MQ=255) tCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCACCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGt > 2:3003956/1‑150 (MQ=255) gatgaGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCgg > 1:1369033/1‑150 (MQ=255) tgaGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCa < 2:4417493/150‑1 (MQ=255) gaGGCGAAAAACTGTCGTAGGGAAGAGTGTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCaa < 2:152764/150‑1 (MQ=255) gCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAAttt > 1:3770924/1‑150 (MQ=255) gCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAAttt > 1:3770952/1‑150 (MQ=255) gAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTcc > 1:248816/1‑150 (MQ=255) aaaaaCTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCg < 2:1890653/150‑1 (MQ=255) aaaaaCTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCg < 2:1890669/150‑1 (MQ=255) aaaaaCTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCg > 2:3930731/1‑150 (MQ=255) aaaaaCTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCg > 1:2891646/1‑150 (MQ=255) aaaCTGTCGTAGGGAAGAGTGTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCt < 2:4071763/150‑1 (MQ=255) cGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCg < 2:3417370/150‑1 (MQ=255) gTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGt > 1:971594/1‑150 (MQ=255) aGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTg < 2:767845/150‑1 (MQ=255) gggAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGc > 1:3469130/1‑150 (MQ=255) ggAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGca < 1:1001238/150‑1 (MQ=255) aaGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGcaca > 1:1851989/1‑150 (MQ=255) agagTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTTGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAg < 1:2365001/150‑1 (MQ=255) agagTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAg > 2:411163/1‑150 (MQ=255) agagTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAg > 1:2643141/1‑150 (MQ=255) tttCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTg > 2:3646740/1‑150 (MQ=255) ccAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGcc < 2:3638421/150‑1 (MQ=255) tCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGtt < 1:2673969/150‑1 (MQ=255) tCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGtt < 1:4069425/150‑1 (MQ=255) ccGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTa < 2:2739839/150‑1 (MQ=255) cGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTaa > 2:3695787/1‑150 (MQ=255) gCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAAc < 1:3678826/150‑1 (MQ=255) cAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTc > 2:1384871/1‑150 (MQ=255) aGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCg < 1:3662013/150‑1 (MQ=255) aGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCg < 1:3176338/150‑1 (MQ=255) gATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGc > 1:3132670/1‑150 (MQ=255) ttCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGccc < 1:3850938/150‑1 (MQ=255) tcatcaCCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCca < 1:1549168/150‑1 (MQ=255) aCCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGa < 1:3921454/150‑1 (MQ=255) ccATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGAc < 2:4139678/150‑1 (MQ=255) ccATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGAc > 2:2875420/1‑150 (MQ=255) cATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACg > 1:1926449/1‑150 (MQ=255) tGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACgctgc > 2:515989/1‑150 (MQ=255) tGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACgctgc > 1:1814852/1‑150 (MQ=255) gATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACgctgct > 2:4568751/1‑150 (MQ=255) tCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCa < 1:4244483/150‑1 (MQ=255) ggTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCAcc > 1:3398838/1‑150 (MQ=255) gTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCAccc < 2:4028439/150‑1 (MQ=255) aaaCTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGc > 2:1994701/1‑150 (MQ=255) aaCTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCAGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCt > 1:4171710/1‑150 (MQ=255) tGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTg < 1:62757/150‑1 (MQ=255) gCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGAc < 1:2824590/150‑1 (MQ=255) gCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGAc < 2:366427/150‑1 (MQ=255) cTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACg < 2:240887/150‑1 (MQ=255) tGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACgg > 1:965432/1‑150 (MQ=255) gATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACggg > 1:1480712/1‑150 (MQ=255) agttCATCATGCAAACGCAGAGCATTTTGCATAACTGGTGCAATGAGTACCACAGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGc > 2:1141874/3‑150 (MQ=255) aTTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGc < 1:4031535/150‑1 (MQ=255) tttCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCa < 1:858011/150‑1 (MQ=255) ttCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAg < 1:2561913/150‑1 (MQ=255) atcatGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGt > 1:71634/1‑150 (MQ=255) atcatGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGt < 2:2311038/150‑1 (MQ=255) catGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTTCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGtat > 2:223753/1‑150 (MQ=255) catGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGtat > 1:267496/1‑150 (MQ=255) aaCGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGat > 1:572079/1‑150 (MQ=255) gCAGAGAATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATAtt > 1:1393318/1‑150 (MQ=255) agagCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGt > 1:3028273/1‑150 (MQ=255) agCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTc > 2:1667899/1‑150 (MQ=255) gCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATaa > 2:1161847/1‑150 (MQ=255) cATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAAc > 2:3325917/1‑150 (MQ=255) cATATCTGGAGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAAc < 1:126716/150‑1 (MQ=255) atatCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACg < 2:907408/150‑1 (MQ=255) atatCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACg > 2:4373138/1‑150 (MQ=255) atatCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACg < 2:2367759/150‑1 (MQ=255) tatCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACgg > 2:2127269/1‑150 (MQ=255) tCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGtt > 2:1096337/1‑150 (MQ=255) tGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGt > 1:4129033/1‑150 (MQ=255) gTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCa > 1:747814/1‑150 (MQ=255) gTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCa > 1:4522434/1‑150 (MQ=255) | TAAAGGGTGGAAAGGCGCGAGGAGATAATGTCCTGATGAGGCGAAAAACTGTCGTAGGGAAGAGTTTCCCAGTCCGCCAGATTCATCACCATTTGATCGGTAAACTGGCTGATTTCATCATGCAAACGCAGAGCATTTTGCATATCTGGTGCAATGAGTACCACCGGACCGGCGTGACGTTCGGCAATTTCCGCTACCAGCGTTGCACAGGCTGCGCCGGTTAACTCGCCCAGCAGACGCTGCTCACCCGCTTTGACGGGCAGCGTATAACGATATTGTTCAGGCATAACGGTTGTCA > CP009273/1169134‑1169431 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |