| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,605,105 | C→T | 15.5% | intergenic (‑168/+59) | uxaB ← / ← yneF | altronate oxidoreductase, NAD‑dependent/putative membrane‑bound diguanylate cyclase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,605,105 | 0 | C | T | 15.5% | 790.3 / 109.3 | 277 | intergenic (‑168/+59) | uxaB/yneF | altronate oxidoreductase, NAD‑dependent/putative membrane‑bound diguanylate cyclase |
| Reads supporting (aligned to +/- strand): ref base C (116/118); new base T (18/25); total (134/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.76e-01 | |||||||||||
Only 100 of 282 total aligned reads displayed.
TAGTCATACAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGCTTCGACCATC > CP009273/1604956‑1605254 | gTCATACAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCt < 1:2753975/150‑1 (MQ=255) gTCATACAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCt < 1:2637624/150‑1 (MQ=255) cATACAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTgg < 2:4068759/150‑1 (MQ=255) tACAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGAt < 2:1849605/150‑1 (MQ=255) aCAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATc < 1:3067585/150‑1 (MQ=255) aaCCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCAt > 2:2410054/1‑150 (MQ=255) cTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATaaa > 1:3402853/1‑150 (MQ=255) tGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAg > 2:928523/1‑150 (MQ=255) gTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGt > 2:4536330/1‑150 (MQ=255) gTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGt < 2:3250130/150‑1 (MQ=255) gTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGt > 1:693100/1‑150 (MQ=255) ttGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTgg < 1:3967627/150‑1 (MQ=255) aTTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGa < 1:3036317/150‑1 (MQ=255) ggTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAaca > 1:1516694/1‑150 (MQ=255) tACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAAcaca < 1:754827/150‑1 (MQ=255) aCGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACAt < 2:3802342/150‑1 (MQ=255) aCGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACAt < 2:1477164/150‑1 (MQ=255) cGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACAtt < 1:3548111/150‑1 (MQ=255) gACAGGTTAGCAAACTTTAATAAGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTg < 2:385109/150‑1 (MQ=255) aCAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGc > 2:2454099/1‑150 (MQ=255) cAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCa > 2:638990/1‑150 (MQ=255) aGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCAt > 2:3437039/1‑150 (MQ=255) ttAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCa < 1:2915940/150‑1 (MQ=255) aGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCaaa > 2:1239382/1‑150 (MQ=255) gCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAAt > 2:3570973/1‑150 (MQ=255) aCTTTTATACGCCGAACCCCTGTTTTGATCAACTCCTTATGATTAATTAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATcgcg < 2:3223056/150‑1 (MQ=255) tAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTa > 1:1821722/1‑150 (MQ=255) aaTACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTaa < 2:2543819/150‑1 (MQ=255) tACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATg > 2:304392/1‑150 (MQ=255) tACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATg > 1:476937/1‑150 (MQ=255) aCGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGa < 1:4139466/150‑1 (MQ=255) gAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATaaa > 2:3338858/1‑150 (MQ=255) gAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATaaa > 1:4272000/1‑150 (MQ=255) ccccTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGAt > 2:1642644/1‑150 (MQ=255) cccTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATg < 2:4183638/150‑1 (MQ=255) tGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCa > 1:3833482/1‑150 (MQ=255) tGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCa > 1:3833542/1‑150 (MQ=255) gTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAg < 1:1870027/150‑1 (MQ=255) ttttGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGGAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGa < 1:544813/150‑1 (MQ=255) ttGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCTCGCGTAATGAATAAAGATTTCAGACa > 2:1959676/1‑150 (MQ=255) tGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACaa > 2:2125320/1‑150 (MQ=255) aTCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACt > 2:631810/1‑150 (MQ=255) cAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACttt > 2:2289600/1‑149 (MQ=255) tCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCa < 1:4466521/150‑1 (MQ=255) tCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCa > 1:514955/1‑150 (MQ=255) tCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCa < 1:1786230/150‑1 (MQ=255) cTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCAcc > 2:3888104/1‑150 (MQ=255) gatTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAAc > 2:1184632/1‑150 (MQ=255) gatTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAAc < 2:1078689/150‑1 (MQ=255) atTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACg < 1:4099596/150‑1 (MQ=255) aTGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATa < 1:4431069/150‑1 (MQ=255) tGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAg > 1:1621395/1‑150 (MQ=255) gAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGt < 1:811432/150‑1 (MQ=255) gAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGt < 2:1359845/150‑1 (MQ=255) cAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCt < 2:4126579/150‑1 (MQ=255) cAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCt > 1:3500997/1‑150 (MQ=255) ttATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTAc > 1:3156791/1‑150 (MQ=255) ttATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTAc > 1:200375/1‑150 (MQ=255) ttATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTAc > 1:2699668/1‑150 (MQ=255) ttATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTAc < 2:771409/150‑1 (MQ=255) tATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACg < 1:26193/150‑1 (MQ=255) tATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACg > 1:2858834/1‑150 (MQ=255) attagaAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACgg > 1:1232791/4‑150 (MQ=255) tGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGt > 2:2793818/1‑150 (MQ=255) gagaAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATACAAAACGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGAAGAGTGCTGGTACGttt > 1:2011996/1‑150 (MQ=255) gaAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTgc < 1:4202540/150‑1 (MQ=255) aGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGccc > 2:2895862/1‑150 (MQ=255) ggCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCAtctt > 2:2387019/1‑150 (MQ=255) ggCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCAtctt < 2:3792157/150‑1 (MQ=255) cgcgGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTTCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCAtctttc < 1:1433391/150‑1 (MQ=255) gcgGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCAtctttct < 1:3023347/150‑1 (MQ=255) cgGATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATTAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCAtctttctt > 1:3685351/1‑150 (MQ=255) cgGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCAtctttctt < 1:1394382/150‑1 (MQ=255) ggATCATGGTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTttcttc < 2:2185824/150‑1 (MQ=255) cATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGc > 1:1118485/1‑150 (MQ=255) aTGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCg > 2:3230525/1‑150 (MQ=255) aTGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCg > 2:1681493/1‑150 (MQ=255) tGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGa > 1:3205478/1‑150 (MQ=255) gTTTAATCGAGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATa > 2:3098971/1‑150 (MQ=255) ttAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACa < 2:3213535/150‑1 (MQ=255) tAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAg < 2:2061055/150‑1 (MQ=255) aaTCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGa > 1:2188177/1‑150 (MQ=255) aTCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGac < 1:3746288/150‑1 (MQ=255) cGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGacac > 1:3277331/1‑150 (MQ=255) cGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGacac < 1:2410054/150‑1 (MQ=255) aGGAAAAACGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGt < 1:4006136/150‑1 (MQ=255) aGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGt > 2:856941/1‑150 (MQ=255) aGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGCACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGt > 2:1324958/1‑150 (MQ=255) ggAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTa > 1:1082508/1‑150 (MQ=255) aaaaaCGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATc > 2:3513794/1‑150 (MQ=255) aaaaCGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCg < 1:4638660/150‑1 (MQ=255) aaaaCGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCg < 1:2255413/150‑1 (MQ=255) aaaCGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCgg > 2:292665/1‑150 (MQ=255) aaCGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGc > 2:529318/1‑150 (MQ=255) aaCGCCTTTTTCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGc > 2:395983/1‑150 (MQ=255) cGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGCtt > 1:4620095/1‑150 (MQ=255) gCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGCTTc < 1:1167693/150‑1 (MQ=255) gCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGCTTc > 1:4479217/1‑150 (MQ=255) ccTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGTCACGTATCGGCTTCg < 2:407794/150‑1 (MQ=255) tCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGCTTCGACCAt > 2:4427049/1‑150 (MQ=255) | TAGTCATACAACCTGTTTGAATTGGTACGACAGGTTAGCAAACTTTAATACGCCGAACCCCTGTTTTGATCAACTCCTGATGATTAATGAGCAGTTTTATGAGAAAAGTGTGGCGCGGATCATGGTTTAATCGAGGAAAAACGCCTTTTCCTGGATCATAAAGTGGTAGAACACATTGCATTCAAATCGCGCGTAATGAATAAAGATGTCAGACAACTTCCTCACCGTAACGCATAGTGCTGGTACGGTTGCGCCCATCTTTCTTCGAGCGATACAGACACGTATCGGCTTCGACCATC > CP009273/1604956‑1605254 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |