| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,648,200 | G→T | 12.0% | T400K (ACG→AAG) | rspA ← | bifunctional D‑altronate/D‑mannonate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,648,200 | 0 | G | T | 12.0% | 1011.3 / 70.7 | 283 | T400K (ACG→AAG) | rspA | bifunctional D‑altronate/D‑mannonate dehydratase |
| Reads supporting (aligned to +/- strand): ref base G (138/111); new base T (18/16); total (156/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 286 total aligned reads displayed.
TATCTGAACCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGAAGACTTCG > CP009273/1648052‑1648349 | tATCTGAACCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGt < 1:3382491/150‑1 (MQ=255) tCTGAACCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGc > 2:1643084/1‑150 (MQ=255) tGAACCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCa > 2:387739/1‑150 (MQ=255) tGAACCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCa > 2:537432/1‑150 (MQ=255) aCCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCt < 1:458155/150‑1 (MQ=255) cacaAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTc < 1:736110/150‑1 (MQ=255) cacaAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTc < 1:521708/150‑1 (MQ=255) cacaAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTc > 1:2341814/1‑150 (MQ=255) caAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCa > 2:4287732/1‑150 (MQ=255) aaTTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGa > 2:577909/1‑150 (MQ=255) aaTTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGa > 2:2898240/1‑150 (MQ=255) aTTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGAc < 2:727563/150‑1 (MQ=255) aTTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGAc < 1:1640706/150‑1 (MQ=255) tCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGt > 1:2185813/1‑150 (MQ=255) ccGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTg < 2:1479024/150‑1 (MQ=255) ggCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCg < 2:1350556/150‑1 (MQ=255) aGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTg < 1:3722381/150‑1 (MQ=255) ttttACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATaa < 1:4058941/150‑1 (MQ=255) tttACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAg > 2:4585264/1‑150 (MQ=255) ttACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGc > 1:1791909/1‑150 (MQ=255) ttACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGc > 1:3266862/1‑150 (MQ=255) ttACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGc > 1:1471303/1‑150 (MQ=255) cTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAgg > 1:2255285/1‑150 (MQ=255) cTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAAGCGCCAGGTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAgg > 2:2036283/1‑150 (MQ=255) tCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGt < 2:2557749/150‑1 (MQ=255) aCTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCAt < 2:1393382/150‑1 (MQ=255) ttCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAg < 2:4107500/150‑1 (MQ=255) cccGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGat < 1:2885796/150‑1 (MQ=255) ccGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGata > 1:2454166/1‑150 (MQ=255) cGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGatat < 1:3988225/150‑1 (MQ=255) cGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGatat > 1:4244440/1‑150 (MQ=255) gCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATAtt < 2:1059900/150‑1 (MQ=255) tGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTc < 2:3331078/150‑1 (MQ=255) gACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTcg < 1:301116/150‑1 (MQ=255) ggggTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTcgccg < 2:3208356/150‑1 (MQ=255) ggtgggtATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGGTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCgccgcc < 2:1232217/150‑1 (MQ=255) gtgggtATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCa > 1:1840745/1‑150 (MQ=255) tgggtATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAg > 2:2158/1‑150 (MQ=255) tATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCttt < 2:3946805/150‑1 (MQ=255) tttCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTc < 1:4406503/150‑1 (MQ=255) cACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATc < 2:3163036/150‑1 (MQ=255) cGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGa > 2:3835314/1‑150 (MQ=255) cGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTc < 1:2684779/150‑1 (MQ=255) cGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTc < 2:1463539/150‑1 (MQ=255) cGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTc < 2:4076763/150‑1 (MQ=255) gACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCg < 2:3249600/150‑1 (MQ=255) gACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCg > 1:2495593/1‑150 (MQ=255) aCAATCGCCCGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGa > 2:96977/1‑150 (MQ=255) cAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGAt < 1:3925558/150‑1 (MQ=255) cAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGAt > 1:632867/1‑150 (MQ=255) aaTCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATa > 1:3756311/1‑150 (MQ=255) aaTCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATa < 2:3647432/150‑1 (MQ=255) tCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATAcc > 1:1334235/1‑150 (MQ=255) cGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCa < 1:3322111/150‑1 (MQ=255) gCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCaa > 1:1584888/1‑150 (MQ=255) gCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCaa > 2:3580456/1‑150 (MQ=255) ccAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAg < 2:2665480/150‑1 (MQ=255) ccAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAg > 2:2619815/1‑150 (MQ=255) cAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGa < 1:3872286/150‑1 (MQ=255) gTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGAcc < 2:777100/150‑1 (MQ=255) tGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCg > 1:2025576/1‑150 (MQ=255) gATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCgg > 2:452852/1‑150 (MQ=255) aTTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGt > 1:1541797/1‑150 (MQ=255) aTTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGt > 1:3628155/1‑150 (MQ=255) cGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTg > 1:1909846/1‑150 (MQ=255) cGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTg > 1:2779430/1‑150 (MQ=255) ttCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTccc < 2:1679279/150‑1 (MQ=255) ttCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTccc > 1:1312797/1‑150 (MQ=255) aTTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGAt > 2:2758473/1‑150 (MQ=255) aTTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGAt > 1:4496447/1‑150 (MQ=255) ttAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATg < 2:3308482/150‑1 (MQ=255) atatGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCat > 2:312803/1‑150 (MQ=255) tatGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCata > 2:1025367/1‑150 (MQ=255) atGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCatat > 1:1142895/1‑150 (MQ=255) tGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCAtata < 2:2957749/150‑1 (MQ=255) tGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCAtata > 2:1191525/1‑150 (MQ=255) ttCATTATCTTACTCCTTACCAGTTCCACAGCTTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGt > 2:3516093/1‑150 (MQ=255) ttCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGt < 1:863713/150‑1 (MQ=255) cATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTa < 1:1643084/150‑1 (MQ=255) cATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTa < 1:2643502/150‑1 (MQ=255) cATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTa > 2:2320245/1‑150 (MQ=255) aTTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTAt > 2:3023907/1‑150 (MQ=255) aTTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTAt > 1:3449844/1‑150 (MQ=255) ttATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATc < 1:2431371/150‑1 (MQ=255) ttATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATc < 1:390777/150‑1 (MQ=255) aTCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGa < 1:1041697/150‑1 (MQ=255) tCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGaa < 1:2008557/150‑1 (MQ=255) cTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTcc > 2:224567/1‑150 (MQ=255) cTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTcc < 2:2100184/150‑1 (MQ=255) ccTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAg > 1:385729/1‑150 (MQ=255) tACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTtg < 2:3776523/150‑1 (MQ=255) aCCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTtgt > 2:242186/1‑150 (MQ=255) aGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCg > 2:1584482/1‑150 (MQ=255) ttCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCggg < 2:4576644/150‑1 (MQ=255) tCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGa > 2:3031154/1‑150 (MQ=255) ccACGGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGAGACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGaa < 2:1571149/150‑1 (MQ=255) cacaGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGAAg > 1:2578683/1‑150 (MQ=255) caGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGAAGAc > 2:1938731/1‑150 (MQ=255) cGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGAAGACTTc < 1:452852/150‑1 (MQ=255) gTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGAAGACTTCg > 2:3550905/1‑150 (MQ=255) | TATCTGAACCACAAATTCCGGCAAGTTTCACTTTTACTCGTACTTCACCCGCTGACGGGGTGGGTATTTCACGTTCGACAATCGCCAGTTGATTCGGTTTTTCAATTAATATGCTTTTCATTATCTTACTCCTTACCAGTTCCACAGCGTGCCATCTTCCAGACGTGCGACTGGTAGATAAGCAGGTTCATAGGGATATTTCGCCGCCAGCTTTTCATCGAATTCGATACCAAGACCCGGTTTGTCTCCCGGATGCATATAGCCGTTATCGAAAGTCCAGTTGTGCGGGAAGACTTCG > CP009273/1648052‑1648349 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |