| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,102,786 | C→T | 16.6% | V94I (GTT→ATT) | wzxB ← | putative polisoprenol‑linked O‑antigen transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,102,786 | 0 | C | T | 16.6% | 643.0 / 98.0 | 235 | V94I (GTT→ATT) | wzxB | putative polisoprenol‑linked O‑antigen transporter |
| Reads supporting (aligned to +/- strand): ref base C (87/109); new base T (18/21); total (105/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 238 total aligned reads displayed.
TTTTTCTTTTCCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCG > CP009273/2102637‑2102931 | tttttCTTTTCCCTGAGACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAAc > 1:1024045/1‑150 (MQ=255) tttcttttcCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTa < 2:3582064/150‑1 (MQ=255) tttattttcCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTa < 1:2970815/150‑1 (MQ=255) ttcttttcCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTAt < 2:2031464/150‑1 (MQ=255) cttttcCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTAttt < 1:547112/150‑1 (MQ=255) ttcCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTg < 2:1659152/150‑1 (MQ=255) ccTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGaaa > 2:919061/1‑150 (MQ=255) aaCAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATc < 2:1518157/150‑1 (MQ=255) aaCAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAAGTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATc < 2:3293158/150‑1 (MQ=255) aCAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCa < 2:2474320/150‑1 (MQ=255) aCAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCa < 2:1248554/150‑1 (MQ=255) gCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCg < 1:3113090/150‑1 (MQ=255) ccATATTGGGTAGATTAAATTCCCGACTATTCCAGTAACACACGACCATATAATTACGCCATGCTTGTTATATTCAGGAACAAGCAAGGTAATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCAcctt < 2:2318370/150‑3 (MQ=255) ccAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGc > 2:2176259/1‑150 (MQ=255) ccAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGc > 1:400218/1‑150 (MQ=255) cAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGcc > 2:1191251/1‑150 (MQ=255) aTAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCaa < 2:3170678/150‑1 (MQ=255) aGGTTAGATTAAATACCCTACAAATGCAGTAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCaaaa < 1:3941819/150‑1 (MQ=255) aGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCaaaa > 1:2415599/1‑150 (MQ=255) tAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATa < 2:365153/150‑1 (MQ=255) ataTTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAg < 1:1269097/148‑1 (MQ=255) aTTAAATTCCCGACTAATGCAGGAAAAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGAc < 1:4381731/150‑1 (MQ=255) ttCCCGAATAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACt < 1:222605/150‑1 (MQ=255) tCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACtt > 1:3814326/1‑150 (MQ=255) cctaCTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTa < 1:3199288/147‑1 (MQ=255) cGACTAATGCAGTAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTAt < 1:1141270/150‑1 (MQ=255) cGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTAt > 1:1525585/1‑150 (MQ=255) aatAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCt < 1:4295682/148‑1 (MQ=255) tAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCttt > 2:1153468/1‑150 (MQ=255) tAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCttt < 2:1572003/150‑1 (MQ=255) gCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTa < 2:4238129/150‑1 (MQ=255) gCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTa < 1:1937173/150‑1 (MQ=255) gCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTa > 1:88793/1‑150 (MQ=255) gCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTa > 2:28443/1‑150 (MQ=255) cAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTAt < 2:2691330/150‑1 (MQ=255) gAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATctg > 2:3974747/1‑150 (MQ=255) cGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCttt < 2:1197344/150‑1 (MQ=255) cGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCttt < 1:487894/150‑1 (MQ=255) cGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCttt < 1:2805739/150‑1 (MQ=255) gACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTg > 2:818121/1‑150 (MQ=255) gACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTg > 2:4071931/1‑150 (MQ=255) tataATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAAt > 1:1415206/1‑150 (MQ=255) aaTTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATAct > 1:1899854/1‑150 (MQ=255) aCGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGa > 2:2299017/1‑150 (MQ=255) aCGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGa < 1:4545231/150‑1 (MQ=255) cGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAg < 2:1332411/150‑1 (MQ=255) aTGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGc > 1:3426719/1‑150 (MQ=255) aTGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGc > 1:1612502/1‑150 (MQ=255) aTGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGc > 2:4530603/1‑150 (MQ=255) tGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCt < 1:1236846/150‑1 (MQ=255) gCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCtg > 1:2572658/1‑150 (MQ=255) tGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTga > 2:899812/1‑150 (MQ=255) gTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTgag < 1:1303365/150‑1 (MQ=255) ttATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTgaga > 2:3365604/1‑150 (MQ=255) ttATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTgaga > 2:4160900/1‑150 (MQ=255) tataTTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGAt > 1:2503034/1‑150 (MQ=255) atatTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGAtt < 1:781339/150‑1 (MQ=255) atatTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGAtt < 2:2924500/150‑1 (MQ=255) tatTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGATATTg < 1:4210648/150‑1 (MQ=255) tatTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTg > 2:3117878/1‑150 (MQ=255) cAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAAc < 1:3568454/150‑1 (MQ=255) aGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAAcc > 2:2225043/1‑150 (MQ=255) aaCAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCata < 1:2081997/150‑1 (MQ=255) aCAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCatat > 2:142035/1‑150 (MQ=255) caagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATAtt < 1:2452490/150‑1 (MQ=255) aagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTc > 1:574836/1‑150 (MQ=255) aagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTc < 2:942279/150‑1 (MQ=255) aagcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTc < 2:4312636/150‑1 (MQ=255) gcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTcaa < 2:4622534/150‑1 (MQ=255) gcaagGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTcaa < 1:4069473/150‑1 (MQ=255) caagGTCATCGACGTAAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTcaac < 2:3888492/150‑1 (MQ=255) ggTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaa > 2:1225047/1‑150 (MQ=255) gTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaac < 1:231187/150‑1 (MQ=255) tCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaaca > 1:1475728/1‑150 (MQ=255) tCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaaca > 1:1811401/1‑150 (MQ=255) tCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCaacaaaca < 1:1841681/150‑1 (MQ=255) cGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTAt > 1:240042/1‑150 (MQ=255) aCGTTAAGAAAATCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCa > 1:2994664/1‑150 (MQ=255) cGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCat < 2:498876/150‑1 (MQ=255) cGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCat < 2:1701206/150‑1 (MQ=255) cGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCat < 2:3572215/150‑1 (MQ=255) gTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCata > 2:3246147/1‑150 (MQ=255) ttAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCatat > 1:338891/1‑150 (MQ=255) tAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCatata < 1:1088755/150‑1 (MQ=255) aaGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCatatat < 2:4369087/150‑1 (MQ=255) aGAAAATCAATGTAAACACGATAAGAACTATAATTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTAACTATACTAAATGATGCTTTGGAAAAAATCTGAGTTGCTGTGAGAATGAAAACATATTCAACAAACATTATCAtatata > 2:2104453/1‑150 (MQ=255) aaaaTCATTGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGTCGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACACACATTATCATATATAGc < 2:1549216/150‑1 (MQ=255) aaTCAATGTAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCAt > 2:4273256/1‑150 (MQ=255) cAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGt < 2:1851507/150‑1 (MQ=255) cAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGt > 2:2292807/1‑150 (MQ=255) aTGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCg < 2:1240347/150‑1 (MQ=255) gTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCt > 1:2832072/1‑150 (MQ=255) tAATGACGATAAGAATTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCtt < 2:1766776/150‑1 (MQ=255) tAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCtt > 1:4131083/1‑150 (MQ=255) taTGACGATAAGAATTATTTTTGAAAATATCACAGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTg < 1:354960/149‑1 (MQ=255) aaTGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTg < 1:1258164/150‑1 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACACACATTATCATATATAGCATAGTCGCTTGGc < 2:2734302/150‑1 (MQ=255) tGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGc < 1:275523/150‑1 (MQ=255) aTAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCaaaaa > 1:3746726/1‑150 (MQ=255) aGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCg < 1:2176276/150‑1 (MQ=255) | TTTTTCTTTTCCCTGAAACAGCCAGATAGGGTAGATTAAATTCCCGACTAATGCAGGAACAAACGACCATATAATTACGGCATGCTTGTTATATTCAGGAACAAGCAAGGTCATCGACGTTAAGAAAATCAATGTAATGACGATAAGAACTATTTTTGAAAATATCACCGCCCAAAAAATAGACGTTACTTTATCTTTACTATCTGCTGCTTTGGCAATACTCTGAGTTGCTGTGAGATTGAAACCATATTCAACAAACATTATCATATATAGCATAGTCGCTTGGCAAAAACCG > CP009273/2102637‑2102931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |