| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,124,797 | C→A | 13.1% | R252L (CGT→CTT) | wcaC ← | putative glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,124,797 | 0 | C | A | 13.1% | 933.5 / 78.6 | 274 | R252L (CGT→CTT) | wcaC | putative glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base C (112/125); new base A (19/17); total (131/143) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 275 total aligned reads displayed.
CATCAGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTCA > CP009273/2124649‑2124946 | caGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAg < 1:1567516/150‑1 (MQ=255) gCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGAt > 2:1347734/1‑150 (MQ=255) cTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGACCTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATc > 2:3877320/1‑150 (MQ=255) ttACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCa > 1:1498319/1‑150 (MQ=255) tACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCAt < 1:780799/150‑1 (MQ=255) cGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATgc > 2:1523325/1‑150 (MQ=255) gTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGccac > 1:3696318/1‑150 (MQ=255) tCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGacacc > 2:1115836/1‑150 (MQ=255) cGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGccacca < 1:1436069/150‑1 (MQ=255) cAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGa > 1:3822414/1‑150 (MQ=255) cAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGa < 1:4144672/150‑1 (MQ=255) aGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGAttt < 2:2524872/150‑1 (MQ=255) gCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGAtttt < 2:3708146/150‑1 (MQ=255) gTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCgg > 1:4042242/1‑150 (MQ=255) gATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCt > 2:2991127/1‑150 (MQ=255) cACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTg < 2:4590426/150‑1 (MQ=255) aCGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTgg < 2:2872501/150‑1 (MQ=255) aCGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTgg < 2:4136170/150‑1 (MQ=255) aCGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTgg > 1:896987/1‑150 (MQ=255) cGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTggg < 1:2284314/150‑1 (MQ=255) tGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGttt > 2:2907717/1‑150 (MQ=255) tGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGttt > 2:935171/1‑150 (MQ=255) tGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGttt < 1:3346304/150‑1 (MQ=255) gCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTc < 1:2982132/150‑1 (MQ=255) gCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTc < 1:1475575/150‑1 (MQ=255) ccAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACAAGATGGGGGTTGGGATTCCCGACGTACCGCAGAGCATGCGACACCACCGCGGGTTTGGGCTTGGCCTGGGTGTcg > 2:2646531/1‑150 (MQ=255) cGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCa < 1:506308/150‑1 (MQ=255) ggTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCAc > 2:2737508/1‑150 (MQ=255) ggTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCAc < 1:3987026/150‑1 (MQ=255) gAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCgg > 2:2927593/1‑150 (MQ=255) aaCGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGa > 1:2137297/1‑150 (MQ=255) aaCGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGa > 1:1302969/1‑150 (MQ=255) cGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAgg > 2:4289021/1‑150 (MQ=255) cGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCaa < 2:124019/150‑1 (MQ=255) cGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCaa > 1:1316126/1‑150 (MQ=255) gagaACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAg > 2:1759030/1‑150 (MQ=255) gagaACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAg > 2:1792365/1‑150 (MQ=255) gagaACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAg > 1:990178/1‑150 (MQ=255) gagaACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAg > 2:816682/1‑150 (MQ=255) agaACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGt > 1:2866348/1‑150 (MQ=255) aaCTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTcc > 1:4398306/1‑150 (MQ=255) aaCTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTcc < 2:4397518/150‑1 (MQ=255) tACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGGCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCa > 2:1372686/1‑150 (MQ=255) tACCAAAGGTATGCAGTTCAATTGTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCa < 2:3308652/150‑1 (MQ=255) ccAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGa > 2:3233704/1‑150 (MQ=255) cAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGaa > 1:4230685/1‑150 (MQ=255) aaGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATc < 2:1205014/150‑1 (MQ=255) aaGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGATGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATc > 1:1177120/1‑150 (MQ=255) aGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCg < 2:2197682/150‑1 (MQ=255) ggTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGc > 1:2910024/1‑150 (MQ=255) gTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCt > 1:1642769/1‑150 (MQ=255) aGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGtt > 1:3569363/1‑150 (MQ=255) aGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGtt < 2:1171605/150‑1 (MQ=255) gTTCAATTTTGTCGCCCAGCGCCATCATATCGCGTAACATTAGCAGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTg > 2:2017949/1‑150 (MQ=255) cAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCa < 2:2100976/150‑1 (MQ=255) aaTTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCat < 2:2271689/150‑1 (MQ=255) aaTTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCat > 1:1580856/1‑150 (MQ=255) aaTTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCat > 2:1897296/1‑150 (MQ=255) ttttGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCatat < 2:3152056/150‑1 (MQ=255) ttGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCa < 1:2032764/150‑1 (MQ=255) tGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCaa < 1:269288/150‑1 (MQ=255) tGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCaa < 1:3436635/150‑1 (MQ=255) gTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAAt < 2:1724271/150‑1 (MQ=255) cGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGc > 1:3085162/1‑150 (MQ=255) cccAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCa > 1:3737441/1‑150 (MQ=255) cccAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCa > 2:3258888/1‑150 (MQ=255) cccAGCGCCATCATCTCGCGTAACAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCa > 2:3636783/1‑150 (MQ=255) cAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCatt > 2:142524/1‑150 (MQ=255) gcCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTg < 2:1628663/150‑1 (MQ=255) ccATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGa < 2:1927177/150‑1 (MQ=255) ccATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGa < 2:3336517/150‑1 (MQ=255) ccATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGa < 1:3904439/150‑1 (MQ=255) catcatCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGAt < 1:2658738/150‑1 (MQ=255) tctcGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATcc < 1:1915871/150‑1 (MQ=255) gcgTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCa < 2:1654265/150‑1 (MQ=255) cgTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCaa > 1:2765692/1‑150 (MQ=255) cgTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCaa > 1:4321834/1‑150 (MQ=255) ccAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGcc > 1:4464487/1‑150 (MQ=255) cAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGccc > 1:387300/1‑150 (MQ=255) aGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCt > 2:1023467/1‑150 (MQ=255) aGTTGCTGGTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCTACGCCCt < 2:4642409/150‑1 (MQ=255) tGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCg < 1:3472291/150‑1 (MQ=255) gTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTa < 2:3248789/150‑1 (MQ=255) gTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTa > 2:3566906/1‑150 (MQ=255) gTTAGTTTTGCCGTCGTAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTa < 1:2510604/150‑1 (MQ=255) ttAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTAc > 2:253307/1‑150 (MQ=255) ttAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTAc < 2:1437062/150‑1 (MQ=255) ttttGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGc < 1:2650550/150‑1 (MQ=255) ttGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTa > 2:2152580/1‑150 (MQ=255) tGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTAt < 2:2424444/150‑1 (MQ=255) gCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTAtt < 1:4624137/150‑1 (MQ=255) ccGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTg < 1:1010460/150‑1 (MQ=255) tcgtAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGaaa > 1:36081/1‑150 (MQ=255) tcgtAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGaaa > 1:3278300/1‑150 (MQ=255) tcgtAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGaaa < 1:2534908/150‑1 (MQ=255) cgtAAAGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAg > 2:66409/1‑150 (MQ=255) tAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCg < 1:142471/150‑1 (MQ=255) aaCGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGt < 2:4473019/150‑1 (MQ=255) aCGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTc > 1:1817552/1‑150 (MQ=255) cGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTCa < 2:1756178/150‑1 (MQ=255) | CATCAGCTTACGTTTGTCGGTTTCAAAGCCGTGATTAACCACGTTGCCAGCGGTGAACGGCGAGAACTTACCAAAGGTATGCAGTTCAATTTTGTCGCCCAGCGCCATCATCTCGCGTACCAGTTGCTGGTTAGTTTTGCCGTCGTAACGCAGATCATGCGCCACCACCGCGATTTTCGGCTTGCCCTGGGTTTCGCGCACCGGAGGCAAGTCCGCCAGAATCGCTTCAGTTGCCATATCAATGCCATTATTGATAATCCGGCAACGCCCTGGACCGTACAGGCTATTGAAAGCGTCA > CP009273/2124649‑2124946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |