| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,443,918 | T→G | 19.2% | Y51S (TAT→TCT) | yfcP ← | putative fimbrial‑like adhesin protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,443,918 | 0 | T | G | 19.2% | 445.2 / 147.9 | 224 | Y51S (TAT→TCT) | yfcP | putative fimbrial‑like adhesin protein |
| Reads supporting (aligned to +/- strand): ref base T (95/86); new base G (10/33); total (105/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.97e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 229 total aligned reads displayed.
TGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGATTTATTC > CP009273/2443769‑2444067 | gTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGata < 1:1272129/150‑1 (MQ=255) cttctACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATAtt < 2:3544584/150‑1 (MQ=255) cttctACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATAtt > 1:1152101/1‑150 (MQ=255) cttctACCCACGTTAGCGTGACTTTTAAGTTGTATCCCGCCGGACCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACTTGAGGACTGGCTTGCAACTTTAAAATCATGACTACTGACCGTTGGAAAGCGCACCTCTGCCAGATAtt < 2:10187/150‑1 (MQ=255) gCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATccaccacca < 2:2239306/150‑1 (MQ=255) tGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAgcg > 1:991830/1‑150 (MQ=255) tttACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAg > 1:3170851/1‑150 (MQ=255) ttACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAgg < 1:2360719/150‑1 (MQ=255) ttACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAgg < 1:312185/150‑1 (MQ=255) tACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGa < 1:568923/150‑1 (MQ=255) tACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGa < 1:900676/150‑1 (MQ=255) cGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGAtt < 2:3096502/150‑1 (MQ=255) gTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGAttt < 2:3792465/150‑1 (MQ=255) tATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACtt > 1:1291898/1‑150 (MQ=255) tATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACtt > 1:1291808/1‑150 (MQ=255) tATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACtt < 2:362082/150‑1 (MQ=255) aTCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTta > 1:1391555/1‑150 (MQ=255) tCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTtaa > 1:1484021/1‑150 (MQ=255) cccGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaat < 2:1987800/150‑1 (MQ=255) cccGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaat < 2:926855/150‑1 (MQ=255) cccGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaat > 2:372094/1‑150 (MQ=255) cccGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaat > 2:4030693/1‑150 (MQ=255) cgccgGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaataa > 2:3475627/1‑150 (MQ=255) cgccgGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaataa > 1:3423421/1‑150 (MQ=255) cgccgGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTtaataa > 2:4073282/1‑150 (MQ=255) gccgGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATaaa > 1:1574097/1‑150 (MQ=255) gCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTAc < 1:3377086/150‑1 (MQ=255) cccTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTAcc > 2:316706/1‑150 (MQ=255) cccTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTAcc > 1:2450548/1‑150 (MQ=255) cccTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTAcc > 1:135587/1‑150 (MQ=255) ccTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCg > 2:1763186/1‑150 (MQ=255) cTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCgg < 1:110631/150‑1 (MQ=255) ttGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGgag < 2:2621561/150‑1 (MQ=255) gCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGaa < 1:1388802/150‑1 (MQ=255) tCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGc < 1:1524519/150‑1 (MQ=255) tCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGat < 2:3069224/150‑1 (MQ=255) cAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGatt < 1:3950816/150‑1 (MQ=255) aGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGatta < 1:1776622/150‑1 (MQ=255) gCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGattat > 1:1076897/1‑150 (MQ=255) cTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGattatt > 2:3235379/1‑150 (MQ=255) ttAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGAttatta < 1:4363492/150‑1 (MQ=255) ttAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGAttatta < 1:3461668/150‑1 (MQ=255) cTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCcg < 2:1279411/150‑1 (MQ=255) tACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCcgc > 1:2169213/1‑150 (MQ=255) aCGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCcgcg > 1:203522/1‑150 (MQ=255) cGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGa > 1:2846414/1‑150 (MQ=255) gggTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGaa > 1:3938427/1‑150 (MQ=255) gTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATa < 2:2930646/150‑1 (MQ=255) acacGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAAc > 1:4526786/1‑150 (MQ=255) cacGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACg < 1:4601921/150‑1 (MQ=255) cacGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACg < 2:2336059/150‑1 (MQ=255) cacGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACg < 1:1696317/150‑1 (MQ=255) gAGCGGACTGGCCTGCAACGTTCAAATCCTTACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGACTAACGTGc > 1:3875019/1‑150 (MQ=255) cGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTAc < 2:1707646/150‑1 (MQ=255) ggACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACt < 2:21934/150‑1 (MQ=255) aCTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCa < 2:1774280/150‑1 (MQ=255) aCTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCa < 2:3602239/150‑1 (MQ=255) cTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCAt > 1:213165/1‑150 (MQ=255) tGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCAtt > 1:2652183/1‑150 (MQ=255) tGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCAtt > 1:334411/1‑150 (MQ=255) tGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCAtt < 1:646823/150‑1 (MQ=255) ggCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCATCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTg < 2:1211781/150‑1 (MQ=255) ggCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTg < 1:3227812/150‑1 (MQ=255) gCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGc > 2:3068554/1‑150 (MQ=255) ccTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGcc < 1:4399220/150‑1 (MQ=255) cTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCa > 1:359831/1‑150 (MQ=255) cTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCa > 2:2673776/1‑150 (MQ=255) aaCGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAatat > 2:2246742/1‑150 (MQ=255) aaCGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACAGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAatat > 2:816600/1‑150 (MQ=255) aCGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATc < 2:4409281/150‑1 (MQ=255) gTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAg > 2:3623612/1‑150 (MQ=255) tCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGcc > 2:1249733/1‑150 (MQ=255) tCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGcc > 1:2349443/1‑150 (MQ=255) cAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGccc < 2:1862467/150‑1 (MQ=255) tCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCt > 1:315496/1‑150 (MQ=255) tGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAAc < 2:4100057/150‑1 (MQ=255) gacgacTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACa > 2:2935638/1‑150 (MQ=255) gacgacTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACa > 1:610698/1‑150 (MQ=255) gacgacTGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACa > 1:1586465/1‑150 (MQ=255) cTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACg < 2:2041052/150‑1 (MQ=255) cTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACg < 1:4481546/150‑1 (MQ=255) cTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGCATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACg > 2:2705830/1‑150 (MQ=255) tGACCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGt > 2:4192247/1‑150 (MQ=255) aCCGTGGGAAAGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTaa < 1:4079719/150‑1 (MQ=255) gggAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAaccacc > 2:4266245/1‑150 (MQ=255) ggAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCg < 1:284372/150‑1 (MQ=255) gAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCgg < 1:242482/150‑1 (MQ=255) gAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCgg > 2:693283/1‑150 (MQ=255) aaaGCGCACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGa < 1:2568646/150‑1 (MQ=255) aGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACt < 2:3686308/150‑1 (MQ=255) aGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACt > 1:4533700/1‑150 (MQ=255) gcgcACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTg < 2:1818867/150‑1 (MQ=255) gcACCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGaa < 2:600652/150‑1 (MQ=255) aCCTCTGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATc > 1:4015656/1‑150 (MQ=255) ctGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTg > 2:1516350/1‑150 (MQ=255) tGCCAGAGATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGa > 1:488827/1‑150 (MQ=255) agagATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGATTTa > 2:3185492/1‑150 (MQ=255) aGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGATTTa > 2:1005061/1‑150 (MQ=255) atatTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGATTTAtt < 1:1042574/150‑1 (MQ=255) tatTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGATTTATTc > 1:3890421/1‑150 (MQ=255) | TGTCTTCTACCCCCGTGAGCGTGACTTTTACGTTGTATCCCGCCGGCCCTTTGCAATCTTTCAGCTTAAAGACTACGGGTACACGAGCGGACTGGCCTGCAACGTTCAAATCCTGACGACTGACCGTGGGAAAGCGCACCTCTGCCAGATATTGGCCATCCACCACCAGCGCACAGGATTTACTTAATAAATTACCGGAGAAATGCAGATTATTATCTGCCGCGAATAACGTGCTACTCATTGCCAATATCAGCCCCGCTAACAGGACGTAACCACCGGACTGAATCATTGATTTATTC > CP009273/2443769‑2444067 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |