| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,491,279 | G→T | 54.5% | R166S (CGT→AGT) | alaC ← | valine‑pyruvate aminotransferase 3 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,491,279 | 0 | G | T | 54.5% | 25.7 / inf | 255 | R166S (CGT→AGT) | alaC | valine‑pyruvate aminotransferase 3 |
| Reads supporting (aligned to +/- strand): ref base G (65/51); new base T (74/65); total (139/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.35e-01 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GGCATAGGCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGCGTCG > CP009273/2491133‑2491425 | tAGGCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGgct < 2:934686/150‑1 (MQ=255) aGGCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGgctc < 2:2571419/150‑1 (MQ=255) aGGCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGgctc < 1:4088704/150‑1 (MQ=255) aGGCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGgctc < 1:858215/150‑1 (MQ=255) ggCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGgctcg < 1:2273701/150‑1 (MQ=255) cAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGgctcgctc < 1:793714/150‑1 (MQ=255) ggTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCa > 1:1422766/1‑150 (MQ=255) cATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGtt > 2:2228503/1‑150 (MQ=255) aTGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTc < 2:4445376/150‑1 (MQ=255) aTGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTc > 2:2466742/1‑150 (MQ=255) tGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCg > 1:1194919/1‑150 (MQ=255) ggACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGt > 2:4103002/1‑150 (MQ=255) ggACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGt > 1:454956/1‑150 (MQ=255) ggACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGt > 2:2901086/1‑150 (MQ=255) gACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGTAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGtt < 1:2983660/150‑1 (MQ=255) gACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGtt < 2:4401424/150‑1 (MQ=255) accaccAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTg < 2:3243334/150‑1 (MQ=255) caccaGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTgaa < 2:1439942/150‑1 (MQ=255) aGCACATCGTAGCGTTTCGACAGCTCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGtaa < 2:378482/150‑1 (MQ=255) cacaTCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATc < 1:4244556/150‑1 (MQ=255) caTCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGa > 1:3971261/1‑150 (MQ=255) cGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTcc > 1:1662054/1‑150 (MQ=255) cGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTcc < 2:1191138/150‑1 (MQ=255) gTTTCGCCAGCGCCACTACTTTTTCTAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGATCGCTCCAGTTCGTTGAAGAAATCGACACCTTcca < 1:1273064/150‑1 (MQ=255) cGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAg > 2:2708573/1‑150 (MQ=255) cGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAg > 1:3245991/1‑150 (MQ=255) gCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGc > 1:1078821/1‑150 (MQ=255) gCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGc > 2:2286808/1‑150 (MQ=255) cAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCgg > 2:101511/1‑150 (MQ=255) cAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCgg < 1:3689119/150‑1 (MQ=255) aGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGc > 1:173430/1‑150 (MQ=255) cgcCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCAc > 1:3799002/1‑150 (MQ=255) gcCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACt > 2:1295653/1‑150 (MQ=255) gcCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACt < 1:1649425/150‑1 (MQ=255) cACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGa > 2:1863258/1‑150 (MQ=255) actactTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAg > 1:1289372/1‑150 (MQ=255) ctactTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGc < 1:1284982/150‑1 (MQ=255) cGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTgcg > 2:2955660/1‑150 (MQ=255) agaaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGccc > 1:3119378/1‑150 (MQ=255) agaaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGccc < 2:2190613/150‑1 (MQ=255) gaaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGcccc > 1:4307847/1‑150 (MQ=255) gaaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGcccc < 1:1263783/150‑1 (MQ=255) gaaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCAGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGcccc > 1:1061824/1‑150 (MQ=255) aaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCg > 2:2587526/1‑150 (MQ=255) aaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCg > 2:3353010/1‑150 (MQ=255) aaCTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCg < 1:2692074/150‑1 (MQ=255) aGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCACTc > 2:427382/1‑150 (MQ=255) gTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCa < 1:3498375/150‑1 (MQ=255) gTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCa < 2:4344293/150‑1 (MQ=255) ccACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACcg < 2:1312284/150‑1 (MQ=255) aCGCAGTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACcgcg < 2:2692571/150‑1 (MQ=255) cATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCa > 1:3071321/1‑150 (MQ=255) cATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCa < 2:2304400/150‑1 (MQ=255) aTTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCAt > 2:2335204/1‑150 (MQ=255) tGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATaa < 1:2847467/150‑1 (MQ=255) cgcgGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAat < 1:2817975/150‑1 (MQ=255) cgcgGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAat < 2:851001/150‑1 (MQ=255) ggTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATg > 2:2037080/1‑150 (MQ=255) ggTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATg < 1:1659116/150‑1 (MQ=255) tGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGAt < 1:1968541/150‑1 (MQ=255) tGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGAt < 1:3652015/150‑1 (MQ=255) ggTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCg > 1:593226/1‑150 (MQ=255) aCGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAAc < 2:1655184/150‑1 (MQ=255) cGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACt > 2:4078013/1‑150 (MQ=255) cGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACt > 2:3649843/1‑150 (MQ=255) cGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACt > 1:2359869/1‑150 (MQ=255) gggAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACtt < 2:3451765/150‑1 (MQ=255) gggAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACtt > 1:3400667/1‑150 (MQ=255) ggAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTg > 1:1325087/1‑150 (MQ=255) gAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTgg > 1:3013655/1‑150 (MQ=255) aaGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGa < 2:173829/150‑1 (MQ=255) aGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGAt < 2:4149016/150‑1 (MQ=255) tccGAGGATCATCATATTCTGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGAtt < 2:4513467/149‑1 (MQ=255) cGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCg < 1:3470764/150‑1 (MQ=255) cGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCg < 1:3248439/150‑1 (MQ=255) gAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCgg > 1:697594/1‑150 (MQ=255) gAGGATCATCATCTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCgg > 2:3250/1‑150 (MQ=255) gAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCgg > 1:2907499/1‑150 (MQ=255) aGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGc > 1:4606666/1‑150 (MQ=255) ggATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCa < 2:2941930/150‑1 (MQ=255) ggATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCa < 2:3735275/150‑1 (MQ=255) atcatcatcTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCAcc > 1:2154693/1‑150 (MQ=255) tcatcatcTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCa < 1:1093156/150‑1 (MQ=255) tcatcatcCTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCa > 2:4600155/1‑150 (MQ=255) catcTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCAc > 1:3550332/1‑150 (MQ=255) atcTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCAcc > 2:802493/1‑150 (MQ=255) atcTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCAcc > 1:4427444/1‑150 (MQ=255) cTTCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCgt < 1:628858/150‑1 (MQ=255) ttCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCgtg > 1:1399193/1‑150 (MQ=255) tCGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCgtgt > 2:559980/1‑150 (MQ=255) cGGTTTCGGATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTc < 2:702374/150‑1 (MQ=255) ggTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCa > 2:18922/1‑150 (MQ=255) ggATAACTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGa > 1:2044870/1‑150 (MQ=255) ggATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGa > 2:1141006/1‑150 (MQ=255) cTTTCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGc < 1:1905320/150‑1 (MQ=255) cTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGc > 2:304648/1‑150 (MQ=255) tttCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAACTATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGCg < 2:903325/150‑1 (MQ=255) ttCACTAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGCGt < 1:240334/150‑1 (MQ=255) tCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGCGTc > 2:3987886/1‑150 (MQ=255) cACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGCGTCg > 1:3763801/1‑150 (MQ=255) | GGCATAGGCCAGGTCATGGACCACCAGCACATCGTAGCGTTTCGCCAGCGCCACTACTTTTTCGAAGAACTCCAGTTCCACGCATTGCGCGGTTGGGTTTGACGGGAAGCCGAGGATCATCATCTTCGGTTTCGGATAACTTTCACGAATGGCTCGCTCCAGTTCGTTGAAGAAATCGACACCTTCCACCAGCGGCACTGAGCGTACCTGCGCCCCGGCAATCACCGCGCCATAAATATGGATCGGGTAACTTGGATTCGGCACCAGCACCGTGTCACCATGATCCAGCGTCG > CP009273/2491133‑2491425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |