| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,521,860 | T→A | 12.6% | H559L (CAC→CTC) | ligA ← | DNA ligase, NAD(+)‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,521,860 | 0 | T | A | 12.6% | 922.3 / 103.7 | 309 | H559L (CAC→CTC) | ligA | DNA ligase, NAD(+)‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (140/129); new base A (21/18); total (162/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.53e-01 | |||||||||||
Only 100 of 311 total aligned reads displayed.
GCTGCCCGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATAGAGGAAGCGA > CP009273/2521712‑2522009 | gCTGCCCGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTg > 1:1379985/1‑150 (MQ=255) tGCCCGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTggg < 1:2181864/150‑1 (MQ=255) tGCCCGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTggg < 1:3316505/150‑1 (MQ=255) cccGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGAt > 2:2843895/1‑150 (MQ=255) cccGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGAt < 2:1303384/150‑1 (MQ=255) cccGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGAt > 1:2477887/1‑150 (MQ=255) ccGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATg < 2:1731164/150‑1 (MQ=255) cGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGc > 1:737004/1‑150 (MQ=255) cGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGc < 1:2071491/150‑1 (MQ=255) aaGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCTCTGATGACATTGCGGTTGCTTTCTTCGTCAATGAAGTTGTGAACGAGGGATGAAAc > 1:970496/1‑150 (MQ=255) caccacGGTTTTACCAGCAAATGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGAc > 1:413650/1‑150 (MQ=255) caccacGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGAc > 2:1082528/1‑150 (MQ=255) ggTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGcc > 1:2091980/1‑150 (MQ=255) ggTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGcc < 1:2306879/150‑1 (MQ=255) gTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCa < 2:4373762/150‑1 (MQ=255) gTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCa > 1:1221792/1‑150 (MQ=255) aCCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATc > 1:3749001/1‑150 (MQ=255) aCCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATc > 2:4596517/1‑150 (MQ=255) aCCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATc > 1:910091/1‑150 (MQ=255) ccAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCa < 1:1734925/150‑1 (MQ=255) aGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAgg < 1:4469232/150‑1 (MQ=255) gCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGc > 2:1111876/1‑150 (MQ=255) cAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCa > 2:830722/1‑150 (MQ=255) aaaCGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCAc > 1:2654754/1‑150 (MQ=255) aaaCGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCAc < 2:3686211/150‑1 (MQ=255) cGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCtt > 2:2021916/1‑150 (MQ=255) gggCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCttt < 2:4750/150‑1 (MQ=255) ggCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGTAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCtttt > 2:4558017/1‑150 (MQ=255) tGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCa > 2:4636638/1‑150 (MQ=255) aaTCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGctc > 1:2732572/1‑150 (MQ=255) aaTCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGctc < 1:2362754/150‑1 (MQ=255) aaTCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGctc < 1:2362609/150‑1 (MQ=255) tctTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCa > 2:2435079/1‑150 (MQ=255) tctTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCa > 2:1561932/1‑150 (MQ=255) ctTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCaa < 1:153760/150‑1 (MQ=255) ttCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAAt > 1:2713185/1‑150 (MQ=255) tCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGTACCTTTTGCAGCTCTTCAATc > 2:1655016/1‑150 (MQ=255) tCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATc < 1:462523/150‑1 (MQ=255) tCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATc < 2:2443327/150‑1 (MQ=255) cgcgTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGa < 2:1760531/150‑1 (MQ=255) cgTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAg < 2:2765507/150‑1 (MQ=255) cgTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAg > 2:541167/1‑150 (MQ=255) gTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAgg < 2:3140519/150‑2 (MQ=255) aaCGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttc > 2:913535/1‑150 (MQ=255) aCGCTCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACACTGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttcc < 2:232953/150‑1 (MQ=255) gATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccac < 1:138884/150‑2 (MQ=255) gATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTACAATCGAAGCGgcttccag > 1:1009037/1‑150 (MQ=255) tCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcg < 2:1378053/150‑1 (MQ=255) ggCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcgct > 2:1146144/1‑150 (MQ=255) gcgcAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcgctt < 2:2020361/150‑1 (MQ=255) cAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcgcttcca < 2:3387655/150‑1 (MQ=255) cAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcgcttcca > 2:3620321/1‑150 (MQ=255) cAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACAGTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCGTTTGCAGCTCTTCAATCGAAGCGgattccagcgcttcca > 2:302281/1‑150 (MQ=255) aGGCCAGTGAACTCCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcgcttccag < 1:3460907/150‑1 (MQ=255) aGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGgcttccagcgcttccag < 2:1955400/150‑1 (MQ=255) cAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTg > 2:450250/1‑150 (MQ=255) gTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGcc < 1:3918865/150‑1 (MQ=255) gAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGa < 1:3865692/150‑1 (MQ=255) cacCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAat > 1:2641679/1‑150 (MQ=255) acCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAata > 1:3623984/1‑150 (MQ=255) cGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATgccgc > 1:775545/1‑150 (MQ=255) gCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATgccgcc > 2:3897481/1‑150 (MQ=255) aaCAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGACCGGGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGa > 1:3180035/1‑150 (MQ=255) cAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGAcc > 2:1353981/1‑150 (MQ=255) aGCTCGCTTATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAAAGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGTCct < 1:3346696/150‑1 (MQ=255) aGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACct < 1:3254930/150‑1 (MQ=255) gCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACctg < 2:4357302/150‑1 (MQ=255) gCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGCACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCtgctgc < 2:3217523/150‑1 (MQ=255) cTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCg < 1:808185/150‑1 (MQ=255) cTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCg > 2:891828/1‑150 (MQ=255) tgatgaCATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCgg > 2:3558867/1‑150 (MQ=255) tgatgaCATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCgg > 1:1095599/1‑150 (MQ=255) gatgaCATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGt < 2:4430508/150‑1 (MQ=255) gatgaCATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGt < 1:1422897/150‑1 (MQ=255) tgaCATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTgg > 2:3445840/1‑150 (MQ=255) tgaCATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTgg > 1:1838720/1‑150 (MQ=255) cATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCt < 1:3519112/150‑1 (MQ=255) ttGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCg < 2:2090435/150‑1 (MQ=255) ttGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCg > 2:3961255/1‑150 (MQ=255) gCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGcc < 1:2829640/150‑1 (MQ=255) tGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACtt < 1:2850009/150‑1 (MQ=255) gCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTc < 1:1954532/150‑1 (MQ=255) tttCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCAc < 1:215341/150‑1 (MQ=255) tttCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCAc < 2:2645076/150‑1 (MQ=255) ttcGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGAt < 1:543769/150‑1 (MQ=255) ttcGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGAt > 1:4329418/1‑150 (MQ=255) ttcGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGAt < 1:1664076/150‑1 (MQ=255) cGGCAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGc > 2:141462/1‑150 (MQ=255) gCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCa < 1:1455364/150‑1 (MQ=255) cAAAGAAGTTGTGAACGAGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCaa > 1:4000373/1‑150 (MQ=255) aagaagTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGt > 1:3071493/1‑150 (MQ=255) aagaagTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGt > 2:219394/1‑150 (MQ=255) aagaagTTGTGAACGAGGGATGCAACGACAATGCCACCATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGt < 1:289569/150‑1 (MQ=255) agaagTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTg > 1:4385122/1‑150 (MQ=255) gTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATa < 2:2887183/150‑1 (MQ=255) ttGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATag < 2:1233300/150‑1 (MQ=255) tgtgAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATaga > 1:4537021/1‑150 (MQ=255) gTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATAGAGGAAGCg > 2:3281679/1‑150 (MQ=255) gTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATAGAGGAAGCg < 2:3141181/150‑1 (MQ=255) tGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATAGAGGAAGCGa < 2:4130278/150‑1 (MQ=255) | GCTGCCCGTAAGCACCACGGTTTTACCAGCAAACGGGCTGTCAATCTCTTCCGCGTTGATAACGATCGGCGCAGGCCAGTGAACACCTTCCGCCAACAGCTCGCTGATGACATTGCGGTTGCTTTCTTCGGCAAAGAAGTTGTGAACGTGGGATGCAACGACAATGCCAACATCAGGCACCTTTTGCAGCTCTTCAATCGAAGCGGCTTCCAGCGCTTCCAGCGTGCCGAAATATGCCGCCAGACCTGCTGCGGTGGCCTCGCCGACTTCACGGATGCCAAGTGCATAGAGGAAGCGA > CP009273/2521712‑2522009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |