| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,552,999 | A→T | 14.9% | A261A (GCA→GCT) | intZ → | CPZ‑55 prophage; putative phage integrase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,552,999 | 0 | A | T | 14.9% | 827.6 / 120.6 | 286 | A261A (GCA→GCT) | intZ | CPZ‑55 prophage; putative phage integrase |
| Reads supporting (aligned to +/- strand): ref base A (103/140); new base T (24/19); total (127/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 297 total aligned reads displayed.
GATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTT > CP009273/2552852‑2553148 | gATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGcaac > 1:3122533/1‑150 (MQ=255) aGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATc > 1:1479836/1‑150 (MQ=255) aGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATc < 1:1595956/150‑1 (MQ=255) aGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATc < 1:4298021/150‑1 (MQ=255) gTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATca < 1:4625915/150‑1 (MQ=255) aaTTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACAtt < 1:338172/150‑1 (MQ=255) aaTTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACAtt < 2:3307547/150‑1 (MQ=255) aaTTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACAtt < 2:206208/150‑1 (MQ=255) aaTTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACAtt < 1:2264381/150‑1 (MQ=255) ccGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGccc < 2:1894463/150‑1 (MQ=255) cGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCg > 2:3787923/1‑150 (MQ=255) ggCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGc > 1:243625/1‑150 (MQ=255) cTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGa > 1:4093623/1‑150 (MQ=255) tACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTc < 1:351788/150‑1 (MQ=255) tACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTc < 1:2015233/150‑1 (MQ=255) aCAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCa < 2:1274481/150‑1 (MQ=255) aaaGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATg > 2:1707639/1‑150 (MQ=255) aaaGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATg > 1:2532881/1‑150 (MQ=255) aaaGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGAAACAATCACATTGCCCGCTGAAGTCATg > 2:3008497/1‑150 (MQ=255) cccTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAgg < 1:2335542/150‑1 (MQ=255) cTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGcc > 2:1879028/1‑150 (MQ=255) tGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCccg < 1:2864071/150‑1 (MQ=255) agagGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCccgcc > 1:20487/1‑150 (MQ=255) gCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGccgcccg > 2:889297/1‑150 (MQ=255) ccGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGccgcccgc > 2:2678222/1‑150 (MQ=255) ccGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGccgcccgc > 2:2468692/1‑150 (MQ=255) gggAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAt < 2:1147444/150‑1 (MQ=255) ggAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAtg > 2:1417374/1‑150 (MQ=255) aGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCTCATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCAtgtg < 1:2945485/150‑1 (MQ=255) gTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTc > 2:2550833/1‑150 (MQ=255) gTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTc > 2:3368708/1‑150 (MQ=255) gTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTc > 2:3589733/1‑150 (MQ=255) ccAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTccc < 2:2721171/150‑1 (MQ=255) ccAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTccc < 1:2305004/150‑1 (MQ=255) cAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCg < 1:1035916/150‑1 (MQ=255) cAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCg > 2:865128/1‑150 (MQ=255) cAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCg > 2:4450466/1‑150 (MQ=255) cAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCg > 2:228850/1‑150 (MQ=255) aTTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTa < 1:530331/150‑1 (MQ=255) aTTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTa < 1:4251106/150‑1 (MQ=255) ttCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTAt > 1:3350354/1‑150 (MQ=255) cAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCa < 2:4002449/150‑1 (MQ=255) aGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCAc > 2:368533/1‑150 (MQ=255) aCGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACgg > 2:4615628/1‑150 (MQ=255) ggCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCa > 1:2387221/1‑150 (MQ=255) gCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAg < 2:3240713/150‑1 (MQ=255) cAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAgg < 2:1936453/150‑1 (MQ=255) aTACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGACTGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCg < 1:2267268/150‑1 (MQ=255) gTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCg < 2:282904/150‑1 (MQ=255) ttGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAg > 1:3668766/1‑150 (MQ=255) ttGCTTATAATAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGAAACAATCACATTGACCGCTGAAGTCATGAAGGCCCGCCTCCCGCATGTGGTCCCGCTATCACGGAAGGCGGTCGAg > 1:961276/1‑150 (MQ=255) ttATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTAt > 2:2421505/1‑150 (MQ=255) ttATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTAt < 1:720883/150‑1 (MQ=255) tataTTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTAtt > 1:3420505/1‑150 (MQ=255) tAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAgg > 1:2087123/1‑150 (MQ=255) aaCGGCATTAAGGACCGCAGACCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGa < 2:2327455/150‑1 (MQ=255) aCGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAc < 1:2791862/150‑1 (MQ=255) aCGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAc < 1:3320376/150‑1 (MQ=255) cGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGAcc > 2:1786080/1‑150 (MQ=255) ggCATTAAGGACCGCAGAACTGCGTTTTTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCa > 1:1083097/1‑150 (MQ=255) ggCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCa > 1:2592324/1‑150 (MQ=255) gCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAg > 1:1537920/1‑150 (MQ=255) aTTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGtt > 2:3998165/1‑150 (MQ=255) ttAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTc < 1:3934835/150‑1 (MQ=255) atggACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTcac > 1:4067364/3‑150 (MQ=255) ggACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCacac < 1:3166933/150‑1 (MQ=255) ggACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCacac < 1:1827828/150‑1 (MQ=255) gACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACg > 1:1163695/1‑150 (MQ=255) gACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACg < 1:378403/150‑1 (MQ=255) cAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCg < 2:2345001/150‑1 (MQ=255) aGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCgg > 1:1230982/1‑150 (MQ=255) aaCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGAt > 1:3999274/1‑150 (MQ=255) aCTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATa < 2:1517387/150‑1 (MQ=255) gCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAg > 1:191990/1‑150 (MQ=255) cGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGt < 1:3589790/150‑1 (MQ=255) tttGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGc > 2:1357055/1‑150 (MQ=255) ttGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCTCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCt < 2:3744159/150‑1 (MQ=255) ttGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCt < 2:1162422/150‑1 (MQ=255) cGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTc > 1:2776099/1‑150 (MQ=255) gTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCt < 1:773708/150‑1 (MQ=255) gTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCt > 1:1259378/1‑150 (MQ=255) tgtgAATGTATAAACCTTGAGGACGCAACACTCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCttt < 2:501587/147‑1 (MQ=255) tGGGAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCttt > 2:4479262/1‑150 (MQ=255) tGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCttt < 2:243625/150‑1 (MQ=255) ggAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTcc < 2:629132/150‑1 (MQ=255) gAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCa > 1:2861932/1‑150 (MQ=255) gAATGGATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCa > 1:4131940/1‑150 (MQ=255) aaTGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAg < 1:2974222/150‑1 (MQ=255) aaTGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAg < 1:3053862/150‑1 (MQ=255) aaTGGATAAACCTGGAGGACGAAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCCGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAg < 2:3481205/150‑1 (MQ=255) gATAAACCTGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCg < 2:3903983/150‑1 (MQ=255) gATAAACCTGGAGGACGCAACAATCACAGTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCg < 1:976899/150‑1 (MQ=255) tAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGAt < 1:4218332/150‑1 (MQ=255) aaaCCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGAtt < 1:4494370/150‑1 (MQ=255) cTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATg < 2:4287840/150‑1 (MQ=255) tGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATgg < 1:1427606/150‑1 (MQ=255) tGGAGGACGCTACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATgg < 1:2678222/150‑1 (MQ=255) ggaggaCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGa < 1:271727/150‑1 (MQ=255) gaCGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATaaa > 2:2006149/1‑150 (MQ=255) caacaaTCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCt < 1:4450466/150‑1 (MQ=255) | GATTAGTGAAATTCCGGCCTTCTACAAAGCCCTTGAGAGGGCCGGGAGCGTCCAGATTCAGACGGCAATACGTTTGCTTATATTAACGGCATTAAGGACCGCAGAACTGCGTTTGTGCCGTTGGGAATGGATAAACCTGGAGGACGCAACAATCACATTGCCCGCTGAAGTCATGAAGGCCCGCCGCCCGCATGTGGTCCCGCTATCACGGCAGGCGGTCGAGCTATTGCAGGACCAGTTCACACGCAGCGGATACAGTGCTTTCGTCTTTCCAGGCCGATTCATGGATAAACCCTT > CP009273/2552852‑2553148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |