| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,636,214 | T→A | 43.4% | intergenic (‑11/+274) | rodZ ← / ← rlmN | MreB assembly cytoskeletal protein/dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,636,214 | 0 | T | A | 43.4% | 115.7 / inf | 235 | intergenic (‑11/+274) | rodZ/rlmN | MreB assembly cytoskeletal protein/dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (56/77); new base A (58/44); total (114/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.61e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.45e-01 | |||||||||||
Only 100 of 238 total aligned reads displayed.
TGTCGCGTACCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTGTTG > CP009273/2636065‑2636360 | tGTCGCGTACCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGt < 1:2811979/150‑1 (MQ=255)tGTCGCGTACCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGt < 1:4021454/150‑1 (MQ=255) cgcgTACCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACg > 2:4078341/1‑150 (MQ=255) aCCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTaa > 2:4171094/1‑150 (MQ=255) aCCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTaa < 2:476662/150‑1 (MQ=255) cGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAAt > 2:1641008/1‑150 (MQ=255) gTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATg > 2:4605483/1‑150 (MQ=255) gTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATg < 1:3403416/150‑1 (MQ=255) gTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATg < 1:3402992/150‑1 (MQ=255) tGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATga < 2:2511656/150‑1 (MQ=255) ggAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATgag > 2:2448179/1‑150 (MQ=255) ggAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATgag > 1:4581673/1‑150 (MQ=255) ggAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATgag > 1:2545639/1‑150 (MQ=255) aaaCCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGaa > 1:529580/1‑150 (MQ=255) ccTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTg > 2:1999711/1‑150 (MQ=255) cTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTga < 2:2900267/150‑1 (MQ=255) ttCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTgag < 2:1388175/150‑1 (MQ=255) tCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTgaga > 1:3714274/1‑150 (MQ=255) cAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGAt < 1:3546407/150‑1 (MQ=255) aGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATg > 2:1509004/1‑150 (MQ=255) aGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTGCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATg > 2:1080323/1‑150 (MQ=255) aaaGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCgg > 2:2203984/1‑150 (MQ=255) aaGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGt > 1:224888/1‑150 (MQ=255) cTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACca > 2:639541/1‑150 (MQ=255) tCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACcat < 2:1176622/150‑1 (MQ=255) aaCGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGc > 1:2449353/1‑150 (MQ=255) aaCGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGc > 1:1044306/1‑150 (MQ=255) aCGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCt > 1:167435/1‑150 (MQ=255) ggCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCa > 1:351430/1‑150 (MQ=255) gctgACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCcac > 2:3855771/1‑150 (MQ=255) gctgACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCcac < 1:3554784/150‑1 (MQ=255) gACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACAcc < 1:1136181/150‑1 (MQ=255) gACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACAcc > 2:936542/1‑150 (MQ=255) aaGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGa > 1:1932409/1‑150 (MQ=255) aaGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGa < 1:381154/150‑1 (MQ=255) cTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACAt < 2:1860573/150‑1 (MQ=255) tgttCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCgtt < 2:2742255/150‑1 (MQ=255) tgttCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCgtt < 2:3030895/150‑1 (MQ=255) tCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCgttaag < 1:326531/150‑1 (MQ=255) tCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGACTTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCgttaag > 2:3794680/1‑150 (MQ=255) gcgAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCgttaagtt < 1:774622/150‑1 (MQ=255) gCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAAcc < 2:152468/150‑1 (MQ=255) gCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAAcc < 2:4124318/150‑1 (MQ=255) aTTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGt > 2:859927/1‑150 (MQ=255) ttACGCAGGCGAGCGCCGGTAGTAAGTGCTTCANTTTGGTCGTNCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGtt < 1:2931442/150‑1 (MQ=255) cGCAGGCGAGCGGCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATc < 1:3194124/150‑1 (MQ=255) gCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACa < 1:4183890/150‑1 (MQ=255) cGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAg < 1:1730800/150‑1 (MQ=255) cGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAg > 1:1213034/1‑150 (MQ=255) cGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAg > 2:3303499/1‑150 (MQ=255) cGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAg < 2:1553247/150‑1 (MQ=255) gAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGt < 1:3435210/150‑1 (MQ=255) gAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGt > 1:2315649/1‑150 (MQ=255) gAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGt > 2:593443/1‑150 (MQ=255) gAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGt > 2:593357/1‑150 (MQ=255) gAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGt > 2:1532881/1‑150 (MQ=255) gcCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATaa > 1:3368720/1‑150 (MQ=255) ccGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAg < 1:150121/150‑1 (MQ=255) gtagtaAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGAcc < 2:2578650/150‑1 (MQ=255) tagtaAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCg < 2:3286002/150‑1 (MQ=255) tagtaAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCg < 1:3834275/150‑1 (MQ=255) tagtaAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCg < 2:1923219/150‑1 (MQ=255) agtaAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGt < 1:4277617/150‑1 (MQ=255) agtaAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGt > 1:1936619/1‑150 (MQ=255) taAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCt > 2:94831/1‑150 (MQ=255) aaGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCtg < 1:4082019/150‑1 (MQ=255) aaGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCtg > 1:844745/1‑150 (MQ=255) tGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCtgtgt < 2:3613599/150‑1 (MQ=255) gCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTCTAAGACCGTCtgtgtg > 1:4307897/1‑150 (MQ=255) gCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCtgtgtg < 2:3718468/150‑1 (MQ=255) gCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCtgtgtg < 1:4157699/150‑1 (MQ=255) gCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGAGGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCtgtgtg < 2:1092596/150‑1 (MQ=255) ttCATTTTGGTCGTGCGTGGCTTCAGTATTCGTTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCt > 2:3823431/1‑150 (MQ=255) cATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCg < 1:1315291/150‑1 (MQ=255) cATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCg < 1:50489/150‑1 (MQ=255) cATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCg > 1:1860142/1‑150 (MQ=255) aTTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGt > 2:3574629/1‑150 (MQ=255) gTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACaaa < 2:3261211/150‑1 (MQ=255) gtgcgtgGCTTCAGTATTCAGTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGcc < 1:4044442/150‑1 (MQ=255) gtgGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAATCATCCGTTAAGTTAACCGTTATCATCCAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCcaca < 1:905057/150‑1 (MQ=255) gtgGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCcaca > 2:2739040/1‑150 (MQ=255) tgGCTTCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCcacct > 2:4297548/1‑148 (MQ=255) gCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTc < 2:3212085/150‑1 (MQ=255) cTTCAGTATTCATTCGCTGCAGGTACGATTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCa < 1:3410990/150‑1 (MQ=255) tCAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACt < 1:1795522/150‑1 (MQ=255) cAGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTa > 2:4100910/1‑150 (MQ=255) aGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTaa > 2:3343415/1‑150 (MQ=255) aGTATTCATTCGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTaa > 2:1385991/1‑150 (MQ=255) cattcGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTaa < 2:4509465/150‑1 (MQ=255) cattcGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTaa > 1:2506620/1‑150 (MQ=255) attcGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAAc < 1:3028801/150‑1 (MQ=255) ttcGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACt > 1:1570223/1‑150 (MQ=255) ttcGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACt < 1:66427/150‑1 (MQ=255) ttcGCTGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACt < 1:1021454/150‑1 (MQ=255) cTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACt < 1:2867193/150‑1 (MQ=255) tGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTg > 2:3163584/1‑150 (MQ=255) tGCAGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTg < 1:1550253/150‑1 (MQ=255) cAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTGtt < 1:2978869/150‑1 (MQ=255) cAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTGtt < 2:718462/150‑1 (MQ=255) aGGAACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTGTTg < 2:2125012/150‑1 (MQ=255) | TGTCGCGTACCGTGGAAACCTTCAGGCAAAGTCGCTCGGCAACGGCCTGCTGACTAAGTCCTAGTTGTTCGCGAGCATTACGCAGGCGAGCGCCGGTAGTAAGTGCTTCATTTTGGTCGTGCGTGGCTTCAGTATTCATTCGCTGCAGGTACGTTTAAATGAGAATTGAGATGCCGGTGAACCATCATGCTCACCCACACCGCGAAACATCCGTTAAGTTAACCGTTATCATACAGTATAAGACCGTCTGTGTGCTCGTGACAAAGCCCACATTCACTAAGGCTAACTTACTGTTG > CP009273/2636065‑2636360 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |