| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,690,778 | C→A | 33.9% | D147Y (GAC→TAC) | tadA ← | tRNA‑specific adenosine deaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,690,778 | 0 | C | A | 33.9% | 473.5 / 239.0 | 262 | D147Y (GAC→TAC) | tadA | tRNA‑specific adenosine deaminase |
| Reads supporting (aligned to +/- strand): ref base C (96/77); new base A (47/42); total (143/119) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
GTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGAC > CP009273/2690629‑2690927 | ttctttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCAc > 2:1907510/1‑150 (MQ=255) tctttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACt < 2:3726208/150‑1 (MQ=255) tttcCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAATAGAAACATAATTAATCCTTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGa < 1:365897/150‑1 (MQ=255) tcCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGc < 2:1859683/150‑1 (MQ=255) cccAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCa < 1:2747648/150‑1 (MQ=255) cAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAAc < 1:3398853/150‑1 (MQ=255) cAGTCGTCATCAAACTATTTGACACATTCTCCCTATCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATTCGAAAGAAGTCACTGAGCAAc < 1:1834431/150‑1 (MQ=255) tcatcaAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCcgcg > 2:2845267/1‑150 (MQ=255) atcaAACTATTTGACCCATTCTCCCTCTCTGCTGTTTACCAGGAAAGGGAGTGAAGAGAAACAAAATAAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACAGAGCAACGCCGCGCa > 2:3909230/1‑150 (MQ=255) cTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATc > 1:555651/1‑150 (MQ=255) aTTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCg < 2:1465687/150‑1 (MQ=255) gACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAg > 2:4223246/1‑150 (MQ=255) aCCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGt < 2:2228024/150‑1 (MQ=255) cccATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTa > 2:1364003/1‑150 (MQ=255) cATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTAtt < 2:791646/150‑1 (MQ=255) ctcCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTAttcctt > 2:2557087/1‑150 (MQ=255) tcCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTAttccttc < 2:354508/150‑1 (MQ=255) tcCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTAttccttc > 1:2959805/1‑150 (MQ=255) tcCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTAttccttc < 1:2599980/150‑1 (MQ=255) tctGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAAt < 1:2015583/150‑1 (MQ=255) ctgTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTcc > 2:3427174/1‑150 (MQ=255) tttCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTc > 1:3976966/1‑150 (MQ=255) ccAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGt > 1:2631849/1‑150 (MQ=255) ccAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGt > 2:4401532/1‑150 (MQ=255) ccAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGt < 2:1508608/150‑1 (MQ=255) aGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGa > 2:1006919/1‑150 (MQ=255) gAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGAtt > 1:3187230/1‑150 (MQ=255) aaGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCa < 1:4516029/150‑1 (MQ=255) aaGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCa < 1:1001572/150‑1 (MQ=255) gggAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACCCGGTGAGTCATa > 1:1847377/1‑150 (MQ=255) aGTGAAGAGAAACAAAAATAATCCGTAGAGGATTGCTCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGACAGTATTCCTACCTTAATTTCCACTCGGTGATTCATAccc > 2:2924898/1‑150 (MQ=255) gTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCg < 1:3044013/150‑1 (MQ=255) gTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCg < 1:4168194/150‑1 (MQ=255) agagAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGgatg < 2:3056584/150‑1 (MQ=255) agagAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGgatg < 1:4469759/150‑1 (MQ=255) agaAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGgatgat < 1:1386638/150‑1 (MQ=255) agaAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGgatgat > 1:612980/1‑150 (MQ=255) gaAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGatgatg < 1:1256194/150‑1 (MQ=255) gaAACAAAATTAATCCGTCGAGGAAAGCGCTTTATTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGatgatg > 2:1923915/1‑150 (MQ=255) aaaCAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATgc > 2:2170967/1‑150 (MQ=255) aaaTTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGcac > 2:1538934/1‑150 (MQ=255) aaTTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGcaca > 1:4528574/1‑150 (MQ=255) aaTTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGcaca > 1:1451661/1‑150 (MQ=255) tAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATcc > 2:3794085/1‑150 (MQ=255) aaTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCa > 1:2505158/1‑150 (MQ=255) aaTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCa > 1:803951/1‑150 (MQ=255) aaTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCa > 1:1695062/1‑150 (MQ=255) aTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCAt > 2:1597648/1‑150 (MQ=255) aTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGcaca < 2:23428/145‑1 (MQ=255) aTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGcaca > 1:23428/1‑145 (MQ=255) aTCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCAt < 2:1725791/150‑1 (MQ=255) tCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCAtt < 1:4054965/150‑1 (MQ=255) tCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAg < 2:4530709/150‑1 (MQ=255) cGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGa < 2:3188760/150‑1 (MQ=255) cGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGa < 2:2439990/150‑1 (MQ=255) gAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGAt > 2:4041583/1‑150 (MQ=255) gAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGAt < 2:1872815/150‑1 (MQ=255) gAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGAt > 2:1948567/1‑150 (MQ=255) gAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGAt < 2:2489377/150‑1 (MQ=255) aGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATc < 1:2274381/150‑1 (MQ=255) aGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATc > 2:2270901/1‑150 (MQ=255) aTTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCg < 1:4431562/150‑1 (MQ=255) tGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCa > 2:89966/1‑150 (MQ=255) cgcTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAgc > 1:1145374/1‑150 (MQ=255) tttCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGt < 2:218183/150‑1 (MQ=255) tttCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGt > 1:129016/1‑150 (MQ=255) tttCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGt > 1:3139142/1‑150 (MQ=255) cTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGtttt < 1:3073410/150‑1 (MQ=255) tGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTc < 1:2125983/150‑1 (MQ=255) tGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTc < 1:2010901/150‑1 (MQ=255) gcgcTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTcg > 2:2938339/1‑150 (MQ=255) cgcTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTcgc > 1:742720/1‑150 (MQ=255) aaTTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCAcg > 1:2431596/1‑150 (MQ=255) aaTTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCAcg < 2:3676782/150‑1 (MQ=255) aaTTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCAcg > 2:3111827/1‑150 (MQ=255) aaTTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCAcg < 2:688696/150‑1 (MQ=255) aaTTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCAcg < 1:1050653/150‑1 (MQ=255) tttCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCAcgcg < 2:421956/150‑1 (MQ=255) tCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCa > 2:337764/1‑150 (MQ=255) ccTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAc > 2:391790/1‑150 (MQ=255) ccTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCAc > 2:3450993/1‑150 (MQ=255) tGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCa < 1:1296923/150‑1 (MQ=255) tGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCa < 1:3637139/150‑1 (MQ=255) tGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCa < 2:1422053/150‑1 (MQ=255) tGGCGGCGCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCa < 1:2897592/150‑1 (MQ=255) cggcgCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAg > 1:2860904/1‑150 (MQ=255) cggcgCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAg < 1:1905731/150‑1 (MQ=255) cggcgCATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAg > 1:1502677/1‑150 (MQ=255) cgcATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGAcc > 1:239277/1‑150 (MQ=255) cgcATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGAcc > 2:2699777/1‑150 (MQ=255) gcATGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCa > 1:1089379/1‑150 (MQ=255) cATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCAc > 1:91597/1‑150 (MQ=255) aTGCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCAcg < 2:4227200/150‑1 (MQ=255) gCGAAAGAAGTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCAcgcg < 2:3347213/150‑1 (MQ=255) gaagTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAAt > 1:4345937/1‑150 (MQ=255) gaagTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAAt < 2:3601724/150‑1 (MQ=255) aagTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATg > 2:4143549/1‑150 (MQ=255) agTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGc < 1:3565147/150‑1 (MQ=255) agTAACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGc > 2:2265712/1‑150 (MQ=255) gTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCg > 2:356485/1‑150 (MQ=255) | GTTTCTTTCCCAGTCGTCATCAAACTATTTGACCCATTCTCCCTCTCTGCTGTTTTCCAGGAAAGGGAGTGAAGAGAAACAAAATTAATCCGTCGAGGATTGCGCTTTTTTCTGCGCTTTAATTTCCTGGCGGCGCATGCGAAAGAAGTCACTGAGCAACGCCGCGCACTCATCCGCCAGTATTCCTTCCGTAATTTCCACTCGGTGATTCATACCCGGATGATGCAGCACATCCATTAAAGATCCCGCAGCGCCAGTTTTCGCGTCACGCGCACCAAAGACCACGCGACCAATGCGAC > CP009273/2690629‑2690927 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |