| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,779,767 | A→T | 6.6% | pseudogene (12/2253 nt) | ygaQ → | uncharacterized protein; putative enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,779,767 | 0 | A | T | 6.6% | 858.9 / 37.5 | 259 | pseudogene (12/2253 nt) | ygaQ | uncharacterized protein; putative enzyme |
| Reads supporting (aligned to +/- strand): ref base A (134/108); new base T (8/9); total (142/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.16e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 269 total aligned reads displayed.
ACAGATTTAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGG > CP009273/2779619‑2779916 | aTTTAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAAcc < 1:472742/150‑1 (MQ=255) tttAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCa > 1:1198714/1‑150 (MQ=255) tttAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCa < 2:4137537/150‑1 (MQ=255) ttAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAg > 2:3664102/1‑150 (MQ=255) tAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAgg > 2:731188/1‑150 (MQ=255) aaGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGa > 2:1175662/1‑150 (MQ=255) aaGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGa > 2:2089291/1‑150 (MQ=255) aaGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGa > 1:2168796/1‑150 (MQ=255) cATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGAccc < 1:4292013/150‑1 (MQ=255) ttATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAg > 2:3856436/1‑150 (MQ=255) ccTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAAt > 1:4438195/1‑150 (MQ=255) cTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAAtt < 2:3469351/150‑1 (MQ=255) tttCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTa < 1:964494/150‑1 (MQ=255) ccATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCt < 1:3670243/150‑1 (MQ=255) ccATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCt < 1:1060094/150‑1 (MQ=255) cATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTa > 1:1181192/1‑150 (MQ=255) cATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTa > 1:1180937/1‑150 (MQ=255) ataAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCg > 1:3757352/1‑150 (MQ=255) aaaTATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGAc > 1:1541961/1‑150 (MQ=255) aaTATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACa < 1:1759910/150‑1 (MQ=255) tAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACAt < 1:3451370/150‑1 (MQ=255) tAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACAt > 1:3511483/1‑150 (MQ=255) aaaGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTg > 2:2892609/1‑150 (MQ=255) gTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTa < 1:4478885/150‑1 (MQ=255) tAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTAt < 1:2601408/150‑1 (MQ=255) ggACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCa < 2:2246056/150‑1 (MQ=255) tCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGaa > 2:3213993/1‑150 (MQ=255) cTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAAc < 2:4415156/150‑1 (MQ=255) tGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACa > 1:2209608/1‑150 (MQ=255) gTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACAt > 1:2931011/1‑150 (MQ=255) tttGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATTAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACAtt < 2:1493241/150‑1 (MQ=255) aaTTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGa < 1:4505914/150‑1 (MQ=255) aaTTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCAACATTGTTATCATGGAACATTACTGa < 1:378257/150‑1 (MQ=255) aTTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGAc < 1:57102/150‑1 (MQ=255) tACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACgg > 2:791736/1‑150 (MQ=255) tACTTTCACAACAATTAAACATTTTTATGTTTCAGTATACATAATATTACTATACCATTAGAGGAAGTTTATTATGTTTTCTATAAAAACAGGACCAAGAAATTTACCTATCGAAAACCCCACATTGTTATCATGGAACATTACTGACgg > 1:2605649/1‑150 (MQ=255) cTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACgggg > 2:666022/1‑150 (MQ=255) cTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACgggg > 2:60720/1‑150 (MQ=255) cTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACgggg > 2:2047001/1‑150 (MQ=255) tttCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGa > 1:1122025/1‑150 (MQ=255) tttCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGa > 1:2649351/1‑150 (MQ=255) ttCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGAACCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGAt > 1:1848280/1‑150 (MQ=255) tCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATc > 2:4213475/1‑150 (MQ=255) tCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATc < 2:1609085/150‑1 (MQ=255) tCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATc < 1:2833699/150‑1 (MQ=255) cacaACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCt > 1:3532703/1‑150 (MQ=255) cacaACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCt > 1:526223/1‑150 (MQ=255) aacaaTTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTaaa > 2:1523896/1‑150 (MQ=255) caaTTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCCCATTGTTATCATGGAACATTACTGACGGGGATCTAAAtt < 2:2140341/150‑1 (MQ=255) caaTTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAAtt < 2:1289708/150‑1 (MQ=255) aTTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTcc > 1:1546583/1‑150 (MQ=255) aTTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTcc > 2:4476112/1‑150 (MQ=255) ttAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCa > 1:2402532/1‑150 (MQ=255) ttAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCa < 2:4114732/150‑1 (MQ=255) tAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCaa < 1:3515957/150‑1 (MQ=255) aCATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAAtt < 1:3245687/150‑1 (MQ=255) aTTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTaa > 1:1687586/1‑150 (MQ=255) tttttATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTaaa < 1:958060/150‑1 (MQ=255) tttttATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTaaa < 1:1034381/150‑1 (MQ=255) tATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACa > 1:994705/1‑150 (MQ=255) aTGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACAt < 1:2571690/150‑1 (MQ=255) aTGTTTCCGTATACATCATATTACTCTAACATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCAAATTGTTATCATGGAACATTTCTTACTGGTATCTAAATTCCAAATTAAATACAt < 2:417736/150‑1 (MQ=255) gTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATTAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTa < 2:232751/150‑1 (MQ=255) ttCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGa > 2:288667/1‑150 (MQ=255) tCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGaa < 2:4493503/150‑1 (MQ=255) ccGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAat > 1:1717732/1‑150 (MQ=255) gTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATTAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAatat > 1:1446697/1‑150 (MQ=255) gTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAACACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAatat < 2:2531143/150‑1 (MQ=255) gTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAatat < 1:1622531/150‑1 (MQ=255) ataCATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCt > 2:2729468/1‑150 (MQ=255) taCATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTa < 1:2015676/150‑1 (MQ=255) aCATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTaa > 1:2991952/1‑150 (MQ=255) atcatATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAAc < 2:1198714/150‑1 (MQ=255) tcatATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACt < 1:3982259/150‑1 (MQ=255) catATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTg < 2:2519497/150‑1 (MQ=255) aCTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAAc < 2:4373280/150‑1 (MQ=255) ccATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAatat > 1:4029671/1‑150 (MQ=255) cATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAAtatt > 2:2187215/1‑150 (MQ=255) cATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAAtatt < 2:1936156/150‑1 (MQ=255) tAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATattatt > 2:1299241/1‑150 (MQ=255) tAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATattatt < 1:3585664/150‑1 (MQ=255) tAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATattatt < 2:3757352/150‑1 (MQ=255) tAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATAATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATattatt < 1:2735917/150‑1 (MQ=255) tAGAGGAAATTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTTACGGGGATCTAAATTCCAAATTAAATAAATTATAATATATAAACTGTATAACAAATattatt > 2:317687/1‑150 (MQ=255) agagGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATAttatta < 2:1327299/150‑1 (MQ=255) gagGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTaa > 2:3123061/1‑150 (MQ=255) agGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAAt > 1:3041953/1‑150 (MQ=255) aaCTTTATTATGTTTTCTATTAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCt < 1:3739934/150‑1 (MQ=255) aCTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCtt < 1:3307742/150‑1 (MQ=255) ttattaTGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTtgtg < 2:1138916/150‑1 (MQ=255) ttattaTGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTtgtg < 2:4593772/150‑1 (MQ=255) ttattaTGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTtgtg > 2:4532679/1‑150 (MQ=255) tattatGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTgg < 2:3810945/150‑1 (MQ=255) ttatGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAg > 2:3489578/1‑150 (MQ=255) tatGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGt < 1:3254462/150‑1 (MQ=255) atGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGAAGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGtt < 2:3532701/150‑1 (MQ=255) tGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGttt < 1:4179554/150‑1 (MQ=255) aaaaCCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAgg > 1:1363758/1‑150 (MQ=255) aaaaCCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAgg > 2:2681008/1‑150 (MQ=255) aaaaCCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAgg < 1:2290778/150‑1 (MQ=255) | ACAGATTTAAGCATTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTTTCACAACAATTAAACATTTTTATGTTTCCGTATACATCATATTACTCTACCATTAGAGGAACTTTATTATGTTTTCTATAAAACCAGGACCCAGAAATTTACCTATCGACAACCCCACATTGTTATCATGGAACATTACTGACGGGGATCTAAATTCCAAATTAAATACATTAGAATATCTAAACTGTATAACAAATATTATTAATTCTTGTGGAGTTTACCCTCAAGG > CP009273/2779619‑2779916 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |