| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,831,086 | C→A | 88.0% | E127* (GAA→TAA) | hydN ← | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,831,086 | 0 | C | A | 88.0% | 772.6 / 101.8 | 297 | E127* (GAA→TAA) | hydN | formate dehydrogenase‑H, [4Fe‑4S] ferredoxin subunit |
| Reads supporting (aligned to +/- strand): ref base C (24/12); new base A (117/143); total (142/155) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.98e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 297 total aligned reads displayed.
TAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTA > CP009273/2830938‑2831231 | tAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCACAGTTGTTAAAGTTTATTACGATCGCCACAAATCAGCGCATGAGTCGGGCAAGCCGCCAAACAAGCCCGGCCGTCTGCACGATGGTTGAACAGGTCCCATTTATTGGCTTCg > 1:1451410/1‑150 (MQ=255) aGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAgg > 2:3782975/1‑150 (MQ=255) cATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCttt > 2:2586861/1‑150 (MQ=255) cATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGGTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCttt > 2:4131361/1‑150 (MQ=255) tCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGt > 1:2682642/1‑150 (MQ=255) cAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTc > 1:2554119/1‑150 (MQ=255) aGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCTTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCa > 2:3444358/1‑150 (MQ=255) aGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCGTCACGGTGGTTGCACAGGTCGCAGTTAGTGGCTTTGGCGTTgggc > 2:4332410/1‑147 (MQ=255) ccGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGccc < 2:4538555/150‑1 (MQ=255) ccGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGccc < 2:1043908/150‑1 (MQ=255) cGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCg < 1:1910383/150‑1 (MQ=255) aCGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTAc > 2:2340199/1‑150 (MQ=255) aCGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTAc > 2:4430656/1‑150 (MQ=255) cggcggCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACa < 1:2305105/150‑1 (MQ=255) gcggcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACAtt > 2:2451019/1‑150 (MQ=255) gcggcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACAtt < 2:1076742/150‑1 (MQ=255) cggcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCATGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTc < 2:119297/150‑1 (MQ=255) ggcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCa < 2:3697043/150‑1 (MQ=255) gcgTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAg > 1:3677987/1‑150 (MQ=255) gTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGAc > 1:573571/1‑150 (MQ=255) gTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGAc > 2:229895/1‑150 (MQ=255) tttCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCcg < 1:718626/150‑1 (MQ=255) tCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCcgcg < 2:1449587/150‑1 (MQ=255) gcTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCt < 1:1028169/150‑1 (MQ=255) cTCAGTTGTTCAAGTTTATTACGAACGACACAAATCAGCGCATGAGTCGGGCAACCCGCCATACACGCCGGCCCGTCTTCACGATGGTTGCACAGGTCGCAATTATTGGCTTAGGCATTGTCAGCCCGTACATACAGACCCGCGCCGCTg > 1:3066469/1‑150 (MQ=255) tCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGt < 2:2002430/150‑1 (MQ=255) gttgttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGc < 2:654816/150‑1 (MQ=255) ttgttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCg < 1:2806816/150‑1 (MQ=255) ttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGAt < 1:135406/150‑1 (MQ=255) ttCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGAt < 2:2182040/150‑1 (MQ=255) tCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATc > 1:2788627/1‑150 (MQ=255) tCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATc < 1:2986849/150‑1 (MQ=255) tCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATc < 1:3470529/150‑1 (MQ=255) tCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATc < 1:425226/150‑1 (MQ=255) cAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCa < 1:701982/150‑1 (MQ=255) cAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCa < 2:754445/150‑1 (MQ=255) tttATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCgg > 1:4009532/1‑150 (MQ=255) taCGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTa > 2:4594104/1‑150 (MQ=255) cGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTacc > 1:1296476/1‑150 (MQ=255) gATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTacca < 2:429965/150‑1 (MQ=255) aTCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTaccac > 2:1497298/1‑150 (MQ=255) aTCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTaccac > 1:2578946/1‑150 (MQ=255) cacaAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACtt < 1:2322057/150‑1 (MQ=255) cacaAATAAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACtt > 2:4037119/1‑150 (MQ=255) aTCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATc > 1:1799723/1‑150 (MQ=255) aTCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATc > 2:3827866/1‑150 (MQ=255) cAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGc > 1:3726563/1‑150 (MQ=255) cAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGc > 2:1597886/1‑150 (MQ=255) gcgcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCAc < 1:4027924/150‑1 (MQ=255) gcgcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCAc > 1:2996759/1‑150 (MQ=255) gcgcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCAc < 1:1203605/150‑1 (MQ=255) cgcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCAcc > 1:1696603/1‑150 (MQ=255) gcATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACTTTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACAACCACTTCCATCGCACCa < 2:2711660/150‑1 (MQ=255) aTGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATa < 2:1954503/150‑1 (MQ=255) gAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACg < 1:3867000/150‑1 (MQ=255) gAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACg < 1:2258145/150‑1 (MQ=255) cAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGcc > 1:2715758/1‑150 (MQ=255) cAAGCCGCAATACAAGCCTGGGCGTATTCAAGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGATGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGcc < 1:106134/150‑1 (MQ=255) aGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCcac > 1:2219443/1‑150 (MQ=255) cgccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAAc < 2:4227741/150‑1 (MQ=255) gccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACg < 2:1688806/150‑1 (MQ=255) ccATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGc > 1:3925025/1‑150 (MQ=255) aTACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAg > 2:1919042/1‑150 (MQ=255) acacGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGt > 2:1779679/1‑150 (MQ=255) cacGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGtt < 1:2909912/150‑1 (MQ=255) cacGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGtt > 1:2952159/1‑150 (MQ=255) acGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGttt < 2:3015103/150‑1 (MQ=255) cGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGtttt < 1:1166791/150‑1 (MQ=255) cGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCa > 1:1656460/1‑150 (MQ=255) cGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCa < 1:2143008/150‑1 (MQ=255) gCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAAcc > 1:2451691/1‑150 (MQ=255) gTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAAt > 2:3869508/1‑150 (MQ=255) tCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATg < 1:3438181/150‑1 (MQ=255) ttCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCa > 1:3181406/1‑150 (MQ=255) tCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCaa < 2:1861467/150‑1 (MQ=255) tCACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCaa < 2:1229086/150‑1 (MQ=255) cACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAAc < 1:3537133/150‑1 (MQ=255) cACGATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAAc > 2:4175114/1‑150 (MQ=255) gATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGtt > 1:2549709/1‑150 (MQ=255) gATGGTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGtt > 1:4523055/1‑150 (MQ=255) aTGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTc > 2:2968607/1‑150 (MQ=255) tGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCACCGTTcc > 2:3178346/1‑150 (MQ=255) ggTTGCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATGACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCt < 1:4332488/150‑1 (MQ=255) gCACAGGTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCAt > 2:4068121/1‑150 (MQ=255) ggTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACAt < 1:3333143/150‑1 (MQ=255) ggTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACAt < 1:1010046/150‑1 (MQ=255) ggTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACAt < 1:978231/150‑1 (MQ=255) ggTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACAt < 2:3252576/150‑1 (MQ=255) gTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATg > 1:1636410/1‑150 (MQ=255) gTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATg < 1:2065235/150‑1 (MQ=255) gTCGCATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATg > 2:1136176/1‑150 (MQ=255) cATTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACa < 1:3782278/150‑1 (MQ=255) aTTTATTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACaa > 2:1385263/1‑150 (MQ=255) aTTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAAccc < 2:819312/150‑1 (MQ=255) aTTGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAAccc > 1:1547262/1‑150 (MQ=255) ttGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCt > 1:2336673/1‑150 (MQ=255) tGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCtt < 2:2417452/150‑1 (MQ=255) tGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCtt < 2:2840454/150‑1 (MQ=255) tGGCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCtt > 1:3668921/1‑150 (MQ=255) gCTTAGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTa < 2:389748/150‑1 (MQ=255) | TAGAACATCAGCGCCGTACGGCGGCGTTTTTCTGCGCTCAGTTGTTCAAGTTTATTACGATCGACACAAATCAGCGCATGAGTCGGGCAAGCCGCCATACACGCCGGGCCGTCTTCACGATGGTTGCACAGGTCGCATTTATTGGCTTCGGCTTTGTCAGCCCGTACATTCAGACCCGCGCCGCTGTTGCGGATCACCGGACGTACCACCACTTCCATCGCACCATACGGGCAAGCCACAACGCAGGTTTTGCAACCAATGCAACGTTCCTGCATCACATGAACAAACCCTTTA > CP009273/2830938‑2831231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |