| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,873,087 | G→T | 100% | V15V (GTC→GTA) | ygbT ← | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,873,087 | 0 | G | T | 97.4% | 898.1 / 12.8 | 269 | V15V (GTC→GTA) | ygbT | multifunctional endonuclease Cas1, CRISPR adaptation protein; DNA repair enzyme |
| Reads supporting (aligned to +/- strand): ref base G (3/4); new base T (143/118); total (147/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 269 total aligned reads displayed.
AGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGGCG > CP009273/2872940‑2873232 | aGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAc < 1:2317045/150‑1 (MQ=255) gCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcg < 1:2080973/150‑1 (MQ=255) tGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcgcg < 1:1021636/150‑1 (MQ=255) tGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcgcg < 1:122102/150‑1 (MQ=255) tGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcgcg < 1:3495675/150‑1 (MQ=255) tGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATAcgcg < 1:3400456/150‑1 (MQ=255) tGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCt < 2:2386697/150‑1 (MQ=255) gCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCtt < 2:1540978/150‑1 (MQ=255) gAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTg < 1:1527518/150‑1 (MQ=255) naaCCCGTGTACCAGGNTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGANCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGa > 2:2167258/2‑150 (MQ=255) aaCCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAg < 1:2899662/150‑1 (MQ=255) aaCCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAg > 2:615522/1‑150 (MQ=255) cGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGa < 2:2039328/150‑1 (MQ=255) cGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGa < 2:4638189/150‑1 (MQ=255) tgtACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAAt > 2:3790598/1‑150 (MQ=255) aCCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATggg < 2:1827761/150‑1 (MQ=255) cAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGAt > 2:1127197/1‑150 (MQ=255) ggTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTa < 2:871541/150‑1 (MQ=255) ggTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTa < 2:3516442/150‑1 (MQ=255) gTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTaa > 1:1944561/1‑150 (MQ=255) ttCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAg > 2:1438579/1‑150 (MQ=255) ttCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAg > 2:2270251/1‑150 (MQ=255) ccAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAggg < 1:3677016/150‑1 (MQ=255) cAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgggg < 1:843221/150‑1 (MQ=255) cAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgggg < 2:2819960/150‑1 (MQ=255) cAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAgggg > 1:3942181/1‑150 (MQ=255) aGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGa < 1:1767460/150‑1 (MQ=255) gCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGaa > 1:30039/1‑150 (MQ=255) gCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGaa < 2:309605/150‑1 (MQ=255) cATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAg > 1:3211864/1‑150 (MQ=255) gCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGt < 1:949876/150‑1 (MQ=255) cAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTc > 2:1506443/1‑150 (MQ=255) cAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTc > 2:3350304/1‑150 (MQ=255) cAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCAttt < 2:1312805/150‑1 (MQ=255) cAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCAttt > 1:3961291/1‑150 (MQ=255) aCCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTtta < 1:4127681/150‑1 (MQ=255) aCCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTtta < 1:4203677/150‑1 (MQ=255) ccGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttat > 1:553529/1‑150 (MQ=255) gAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTttatta > 2:2728619/1‑150 (MQ=255) aGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTac < 2:2393343/150‑1 (MQ=255) cAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACAcc < 1:4034976/150‑1 (MQ=255) cAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACAcc > 2:1778005/1‑150 (MQ=255) aaCAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCt > 2:2138095/1‑150 (MQ=255) aCAGGAATATGAGTGCGGCTCCCTGTCTTGTCGATAAGTTCAAACGCGCAATCTATTACATCGTTCTTCCCTTTTTGCAGTAATATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTGATTTTATTACACCTc < 2:1947565/150‑1 (MQ=255) aCAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTc < 1:2122143/150‑1 (MQ=255) gAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATc > 1:1396705/1‑150 (MQ=255) aaTATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATca > 1:4467872/1‑150 (MQ=255) aaTATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATca > 2:589627/1‑150 (MQ=255) tGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGt < 2:1993134/150‑1 (MQ=255) tGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGt < 1:548477/150‑1 (MQ=255) ggATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCa > 2:2947476/1‑150 (MQ=255) ggATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCa > 2:4396590/1‑150 (MQ=255) ggATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCa < 2:74599/150‑1 (MQ=255) aTCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCaaa > 1:3133274/1‑150 (MQ=255) cTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCaa > 1:34421/1‑150 (MQ=255) tCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCca < 2:3189144/150‑1 (MQ=255) gATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCcaca > 2:3935338/1‑150 (MQ=255) aTAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACAt > 2:2154855/1‑150 (MQ=255) aaGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATcc > 1:1673236/1‑150 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCAt > 1:2638320/1‑150 (MQ=255) tACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCAt < 2:2552693/150‑1 (MQ=255) aCAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATc < 1:613771/150‑1 (MQ=255) aCAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATc < 1:3770978/150‑1 (MQ=255) cAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAAACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTAATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCg > 2:3690811/1‑150 (MQ=255) aaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAt > 1:1547271/1‑150 (MQ=255) aaCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAt < 2:4053403/150‑1 (MQ=255) aCGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAtt > 1:725901/1‑150 (MQ=255) cgcgCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGAttt < 2:4326752/150‑1 (MQ=255) gcgcCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTa < 2:2816817/150‑1 (MQ=255) cgcCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAg > 2:4210200/1‑150 (MQ=255) gcCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGc > 2:693240/1‑150 (MQ=255) ccATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCt < 1:615484/150‑1 (MQ=255) aTCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTgg > 2:1234432/1‑150 (MQ=255) cTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGcc < 1:1452004/150‑1 (MQ=255) aTTACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCa < 1:4052464/150‑1 (MQ=255) tACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAAt > 1:3563087/1‑150 (MQ=255) tACATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAAt < 2:965230/150‑1 (MQ=255) cATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATAc > 2:2118248/1‑150 (MQ=255) cATCGATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATAc > 2:3348187/1‑150 (MQ=255) gATCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTg < 1:318180/150‑1 (MQ=255) aTCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGc > 1:2591613/1‑150 (MQ=255) aTCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGc < 1:2213860/150‑1 (MQ=255) tCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCt > 1:1765024/1‑150 (MQ=255) tCTGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCt < 1:2423611/150‑1 (MQ=255) tGCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGt > 1:1562526/1‑150 (MQ=255) gCCCATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTa < 2:3897184/150‑1 (MQ=255) ccATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACa > 1:3879102/1‑150 (MQ=255) cATATTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACaa > 1:932051/1‑150 (MQ=255) tatTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGa > 2:3111539/1‑150 (MQ=255) tatTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGa < 1:4520040/150‑1 (MQ=255) atTGCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGAt < 1:1110858/150‑1 (MQ=255) gCAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTa > 2:245644/1‑150 (MQ=255) cAGAAAGATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTAt > 1:2752118/1‑150 (MQ=255) gATCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGc > 2:3633018/1‑150 (MQ=255) aTCATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCt > 1:881415/1‑150 (MQ=255) cATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTgg > 2:4384332/1‑150 (MQ=255) cATGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTgg > 1:2425865/1‑150 (MQ=255) aTGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGgc > 1:826791/1‑150 (MQ=255) aTGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGgc > 1:2609125/1‑150 (MQ=255) tGGATACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGgcg > 1:350017/1‑150 (MQ=255) | AGCTGCATGCGAAACCCGTGTACCAGGTTCCAGCATGATGCAGGCAACCGAGCCAACAGGAATATGAGTGCGGATCCCTGTCTTGTCGATAAGTACAAACGCGCCATCTATTACATCGATCTGCCCATATTGCAGAAAGATCATGGAGACGCGATCTTTGAGTGGAATGGGATTAAGGGGAAGCCAGGTCATTTTATTACACCTCAATCACAGTGGAGCCAAAGATAGCAAGCCACATCCCATCGATTTAGCTGGCCCAATACCTTGCTGTACAAGATCTATTAACGCTGGCG > CP009273/2872940‑2873232 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |