| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,233,271 | G→T | 31.1% | intergenic (+367/‑32) | alx → / → sstT | putative membrane‑bound redox modulator/sodium:serine/threonine symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,233,271 | 0 | G | T | 31.1% | 450.0 / 181.7 | 228 | intergenic (+367/‑32) | alx/sstT | putative membrane‑bound redox modulator/sodium:serine/threonine symporter |
| Reads supporting (aligned to +/- strand): ref base G (95/62); new base T (38/32); total (134/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01 | |||||||||||
Only 100 of 234 total aligned reads displayed.
TCAAAGAAATGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCCGCGG > CP009273/3233124‑3233420 | tCAAAGAAATGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGAt > 1:1898714/1‑150 (MQ=255) cAAAGAAATGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGAtg > 1:863137/1‑150 (MQ=255) aaaGAAATGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGAtgt < 1:3504900/150‑1 (MQ=255) aaGAAATGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGAtgtg > 2:2752014/1‑150 (MQ=255) aaTGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCATGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGac > 1:3291067/1‑150 (MQ=255) gTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGacaac > 1:4317871/1‑150 (MQ=255) cATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAAt > 1:3314514/1‑150 (MQ=255) aTTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATg < 2:3548377/150‑1 (MQ=255) aTTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATg > 2:1691737/1‑150 (MQ=255) aGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAg < 2:2086763/150‑1 (MQ=255) aGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAg > 1:2465747/1‑150 (MQ=255) gTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAgg > 2:1635263/1‑150 (MQ=255) tttCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGa < 2:1837249/150‑1 (MQ=255) cAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCg < 2:1422967/150‑1 (MQ=255) aaaaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACTCACCAGGGATGTGCGACAACACAATGAAAGGATCGa > 2:2070545/1‑150 (MQ=255) aaaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaa < 1:3069648/150‑1 (MQ=255) aaaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGaa < 2:796231/150‑1 (MQ=255) aaaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaa > 2:1226600/1‑150 (MQ=255) aaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaaa > 2:1017083/1‑150 (MQ=255) aaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaaa > 2:4006070/1‑150 (MQ=255) aaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaaa < 1:1229841/150‑1 (MQ=255) aaTATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaaa > 1:1607674/1‑150 (MQ=255) atatGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaaaa > 1:15580/1‑150 (MQ=255) tatGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGaaaaa > 1:2743638/1‑150 (MQ=255) ccTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACt < 1:1665057/150‑1 (MQ=255) ccTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACt < 2:387000/150‑1 (MQ=255) tctctTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTAc < 2:3592712/150‑1 (MQ=255) ctTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCa < 2:3425298/150‑1 (MQ=255) tAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACg > 2:4222002/1‑150 (MQ=255) tAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACg > 1:3151973/1‑150 (MQ=255) tAAAATCCAGCATTTTTAGCTTCCCGAAGCTGTAACTTTACTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACg < 2:381051/150‑1 (MQ=255) aaaaTCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGt > 1:468454/1‑150 (MQ=255) aaaaTCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGt > 2:589586/1‑150 (MQ=255) aaTCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTc < 1:3397626/150‑1 (MQ=255) tCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCAc < 1:1392162/150‑1 (MQ=255) tCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCAc < 1:4006283/150‑1 (MQ=255) ccAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCAcc > 1:4247034/1‑150 (MQ=255) gCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCggg > 2:683736/1‑150 (MQ=255) cATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCgggg > 2:514868/1‑150 (MQ=255) cATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCgggg > 2:2833217/1‑150 (MQ=255) aTTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGc > 1:4002612/1‑150 (MQ=255) tttttCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGGTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCt < 2:1351465/150‑1 (MQ=255) tCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTc > 2:2918689/1‑150 (MQ=255) tCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTc > 2:4252757/1‑150 (MQ=255) gCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCg < 1:2024890/150‑1 (MQ=255) gCTTCCCGAAGCTGTAACTTTCCTTATACTCGAACTTGCACACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCg < 1:569914/150‑1 (MQ=255) cTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCgg < 2:2193524/150‑1 (MQ=255) tCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCg > 2:644608/1‑150 (MQ=255) gAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTg < 2:3032328/150‑1 (MQ=255) gAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGACAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTg < 2:185838/150‑1 (MQ=255) gAAGCTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTg < 2:2441069/150‑1 (MQ=255) cTGTAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTc < 1:174541/150‑1 (MQ=255) tAACTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATg < 1:1073079/150‑1 (MQ=255) aCTTTCCTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCGTGGc > 2:220057/1‑150 (MQ=255) cTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCa < 2:3818984/150‑1 (MQ=255) cTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCa < 2:3819268/150‑1 (MQ=255) tttCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAg > 1:4003913/1‑150 (MQ=255) ccTTATACTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCt < 2:2465747/150‑1 (MQ=255) ataCTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTa > 1:3993013/1‑150 (MQ=255) ataCTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTa > 1:2528290/1‑150 (MQ=255) ataCTCGAACTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTa > 1:4228174/1‑150 (MQ=255) gACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAATACaa > 2:2307083/1‑150 (MQ=255) cTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATc > 2:1484213/1‑150 (MQ=255) ttGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATcc > 2:3758215/1‑150 (MQ=255) tGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCt < 2:3862235/150‑1 (MQ=255) tGCAAACACTGTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCt < 2:2459101/150‑1 (MQ=255) gCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTg < 1:4630852/150‑1 (MQ=255) cAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTgg > 1:3559694/1‑150 (MQ=255) aaaCACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGt > 1:3884815/1‑150 (MQ=255) aaCACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTc < 1:1988467/150‑1 (MQ=255) acacTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCg > 1:947699/1‑150 (MQ=255) acacTTAGTTACATCCAGAAAGATTCGTCGACAGAACGCACCAGGGATGTGCGACAACACAAAGAAAGGAACGAAAAAAGACTACTCAACTGTCACCGCGGCTATTCCGGCGACTGGCTCAAGGCAGCCTGCTAAAAAAAATCCTGGTCg > 2:4400583/1‑150 (MQ=255) acTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGc > 2:3280791/1‑150 (MQ=255) cTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGcc > 1:686967/1‑150 (MQ=255) cTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGcc < 2:2604514/150‑1 (MQ=255) cTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGTGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGcc > 2:2749218/1‑150 (MQ=255) tttGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCt < 2:865734/150‑1 (MQ=255) ttGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCtt < 2:4567732/150‑1 (MQ=255) tGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTg < 1:72568/150‑1 (MQ=255) tGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTg < 1:1574548/150‑1 (MQ=255) ttACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGtt > 2:4152788/1‑150 (MQ=255) ttACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGtt > 2:1097874/1‑150 (MQ=255) aCATCCTGAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCt > 1:3246631/1‑150 (MQ=255) aTCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTgg > 2:2030435/1‑150 (MQ=255) gAAAGATGCGTCGACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGAtt > 1:1946245/1‑150 (MQ=255) aGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGAttctt < 2:1709127/150‑1 (MQ=255) aTGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATtcttct < 2:2817021/150‑1 (MQ=255) tGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTg < 1:1715436/150‑1 (MQ=255) gACAGAACGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATgg > 2:3303362/1‑150 (MQ=255) aCAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGa < 1:2485595/150‑1 (MQ=255) aCAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGa < 1:2357198/150‑1 (MQ=255) aaCGCACCAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGAtctc > 1:1710688/1‑150 (MQ=255) gCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCaaa > 1:2126710/1‑150 (MQ=255) aCCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAAc > 2:194898/1‑150 (MQ=255) aCCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAAc > 2:1735776/1‑150 (MQ=255) ccAGGTATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAAcc > 1:2217077/1‑150 (MQ=255) gggATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCcgc > 2:4036909/1‑150 (MQ=255) ggATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCcgcg > 1:3741735/1‑150 (MQ=255) ggATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCcgcg > 2:945633/1‑150 (MQ=255) gATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCCgcgg > 1:2024144/1‑150 (MQ=255) | TCAAAGAAATGTAACCATTAAGTTTCAAAATATGACCTCTCTTTAAAATCCAGCATTTTTCGCTTCCCGAAGCTGTAACTTTCCTTATACTCGACCTTGCAAACACTTTGTTACATCCTGAAAGATGCGTCGACAGAACGCACCAGGGATGTGCGACAACACAATGAAAGGATCGAAAAATGACTACGCAACGTTCACCGGGGCTATTCCGGCGTCTGGCTCATGGCAGCCTGGTAAAACAAATCCTGGTCGGCCTTGTTCTGGGGATTCTTCTGGCATGGATCTCAAAACCCGCGG > CP009273/3233124‑3233420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |