Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 3,243,361 C→A 9.3% S107* (TCG→TAG)  yqjE → DUF1469 family inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,243,3610CA 9.3% 1124.8 / 54.6 299S107* (TCG→TAG) yqjEDUF1469 family inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (135/136);  new base A (11/17);  total (146/153)
Fisher's exact test for biased strand distribution p-value = 3.25e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 308 total aligned reads displayed.

GATGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCT  >  CP009273/3243212‑3243509
                                                                                                                                                     |                                                                                                                                                    
gATGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATc                                                                                                                                                      <  1:4470440/150‑1 (MQ=255)
gATGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATc                                                                                                                                                      <  1:1863137/150‑1 (MQ=255)
 aTGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATcg                                                                                                                                                     <  1:1559452/150‑1 (MQ=255)
  tGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCAACGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATcgc                                                                                                                                                    <  1:2104747/150‑1 (MQ=255)
   gCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATagcg                                                                                                                                                   <  1:862565/150‑1 (MQ=255)
    cTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGt                                                                                                                                                  >  2:53459/1‑150 (MQ=255)
     ttttCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTa                                                                                                                                                 >  1:1346356/1‑150 (MQ=255)
        tCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGt                                                                                                                                              <  2:4302458/150‑1 (MQ=255)
         cGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTc                                                                                                                                             >  1:2770742/1‑150 (MQ=255)
          gCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCt                                                                                                                                            >  1:3118321/1‑150 (MQ=255)
          gCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATAGCGTAAGTCt                                                                                                                                            >  1:3296449/1‑150 (MQ=255)
           cTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTa                                                                                                                                           >  1:1178950/1‑150 (MQ=255)
              cATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGt                                                                                                                                        >  1:3503506/1‑150 (MQ=255)
               aTTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGtt                                                                                                                                       <  2:3086367/150‑1 (MQ=255)
                  tGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTtgct                                                                                                                                    <  1:641805/150‑1 (MQ=255)
                        tATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCa                                                                                                                              >  2:2462205/1‑150 (MQ=255)
                          tGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATa                                                                                                                            >  1:2432897/1‑150 (MQ=255)
                             gCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATacac                                                                                                                         >  1:3005745/1‑150 (MQ=255)
                              ccTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACg                                                                                                                        >  2:762373/1‑150 (MQ=255)
                                tGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGcc                                                                                                                      <  2:1553712/150‑1 (MQ=255)
                                tGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGcc                                                                                                                      <  1:636644/150‑1 (MQ=255)
                                      tGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGt                                                                                                                >  2:2592884/1‑150 (MQ=255)
                                      tGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGt                                                                                                                >  2:3071694/1‑150 (MQ=255)
                                       gCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGACTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGtt                                                                                                               <  2:13347/150‑1 (MQ=255)
                                       gCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGtt                                                                                                               <  2:1072920/150‑1 (MQ=255)
                                        cTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTa                                                                                                              <  1:3333787/150‑1 (MQ=255)
                                               tttGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACg                                                                                                       <  2:602074/150‑1 (MQ=255)
                                                 tGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGAt                                                                                                     >  2:3118692/1‑150 (MQ=255)
                                                 tGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGAt                                                                                                     <  1:1437957/150‑1 (MQ=255)
                                                 tGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGAt                                                                                                     <  1:1629162/150‑1 (MQ=255)
                                                  gggCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATc                                                                                                    <  1:4221499/150‑1 (MQ=255)
                                                   ggCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCg                                                                                                   <  2:2167006/150‑1 (MQ=255)
                                                   ggCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCg                                                                                                   <  1:2936520/150‑1 (MQ=255)
                                                   ggCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCg                                                                                                   >  2:1324919/1‑150 (MQ=255)
                                                      ggTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCa                                                                                                >  2:370737/1‑150 (MQ=255)
                                                      ggTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCAGGAGTTAGCAAACGATCGGCa                                                                                                >  2:131345/1‑150 (MQ=255)
                                                       gTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAg                                                                                               <  1:1222079/150‑1 (MQ=255)
                                                        ttGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAgc                                                                                              >  2:813018/1‑150 (MQ=255)
                                                          gACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAgctg                                                                                            <  2:2910563/150‑1 (MQ=255)
                                                            cccGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAgctgct                                                                                          >  2:2046834/1‑150 (MQ=255)
                                                            cccGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAgctgct                                                                                          >  2:1857351/1‑150 (MQ=255)
                                                            cccGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAgctgct                                                                                          >  2:4188483/1‑150 (MQ=255)
                                                             ccGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTc                                                                                         <  2:4259994/150‑1 (MQ=255)
                                                             ccGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTc                                                                                         <  2:4468951/150‑1 (MQ=255)
                                                              cGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCg                                                                                        >  2:284080/1‑150 (MQ=255)
                                                              cGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCg                                                                                        >  1:3465250/1‑150 (MQ=255)
                                                              cGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCg                                                                                        >  1:296234/1‑150 (MQ=255)
                                                               gCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCga                                                                                       <  1:3349317/150‑1 (MQ=255)
                                                                  atatCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCgagga                                                                                    <  2:1212777/150‑1 (MQ=255)
                                                                     tCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCgaggagga                                                                                 <  1:4514230/150‑1 (MQ=255)
                                                                        ccTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTc                                                                              >  1:3626781/1‑150 (MQ=255)
                                                                            aaTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGt                                                                          <  2:3542487/150‑1 (MQ=255)
                                                                            aaTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGt                                                                          >  1:2175589/1‑150 (MQ=255)
                                                                             aTGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTg                                                                         <  2:2256191/150‑1 (MQ=255)
                                                                                   tgatTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGATCAGt                                                                   <  2:4556290/150‑1 (MQ=255)
                                                                                   tgatTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGt                                                                   <  1:3949756/150‑1 (MQ=255)
                                                                                       tGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAg                                                               <  2:3503215/150‑1 (MQ=255)
                                                                                         ccaccaCCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTc                                                             >  1:1820641/1‑150 (MQ=255)
                                                                                          caccacCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCg                                                            <  1:1017797/150‑1 (MQ=255)
                                                                                             caccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAAc                                                         >  1:1723116/1‑150 (MQ=255)
                                                                                             caccGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAAc                                                         <  2:1398144/150‑1 (MQ=255)
                                                                                              accGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACg                                                        >  1:4109611/1‑150 (MQ=255)
                                                                                                cGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTg                                                      >  1:4587725/1‑150 (MQ=255)
                                                                                                  tggtgTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGaa                                                    >  1:143604/1‑150 (MQ=255)
                                                                                                    gtgtTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAacg                                                  >  1:2368150/1‑150 (MQ=255)
                                                                                                    gtgtTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAacg                                                  >  2:3607593/1‑150 (MQ=255)
                                                                                                    gtgtTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAacg                                                  >  1:146735/1‑150 (MQ=255)
                                                                                                      gtTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAacgac                                                >  1:2550594/1‑150 (MQ=255)
                                                                                                        tgctgcTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGt                                              >  1:1127715/1‑150 (MQ=255)
                                                                                                          ctgctACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTaa                                            >  2:3240932/1‑150 (MQ=255)
                                                                                                             ctACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGgc                                         >  2:4399160/1‑150 (MQ=255)
                                                                                                                cTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCa                                      >  2:3780795/1‑150 (MQ=255)
                                                                                                                cTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCa                                      >  1:2673555/1‑150 (MQ=255)
                                                                                                                   gCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACt                                   <  1:3888197/150‑1 (MQ=255)
                                                                                                                   gCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACt                                   <  1:772965/150‑1 (MQ=255)
                                                                                                                     aCTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGc                                 >  2:1794178/1‑150 (MQ=255)
                                                                                                                      cTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCt                                <  2:3995820/150‑1 (MQ=255)
                                                                                                                      cTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCt                                >  2:1223323/1‑150 (MQ=255)
                                                                                                                       tGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCtt                               <  2:4108554/150‑1 (MQ=255)
                                                                                                                       tGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCtt                               <  2:4493490/150‑1 (MQ=255)
                                                                                                                        gATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTa                              <  2:1881464/150‑1 (MQ=255)
                                                                                                                        gATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTa                              >  2:1128706/1‑150 (MQ=255)
                                                                                                                        gATTGGCGGTATCTGGACGCTACGTAAATAGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTa                              <  1:2821316/150‑1 (MQ=255)
                                                                                                                          ttGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGc                            >  1:1947753/1‑150 (MQ=255)
                                                                                                                            ggCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCa                          <  1:1118898/150‑1 (MQ=255)
                                                                                                                            ggCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCa                          <  2:3757298/150‑1 (MQ=255)
                                                                                                                            ggCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCa                          <  1:3443250/150‑1 (MQ=255)
                                                                                                                               ggTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGAt                       >  2:2330375/1‑150 (MQ=255)
                                                                                                                                 tATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATcc                     >  2:2743006/1‑150 (MQ=255)
                                                                                                                                     tGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGGCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGca                 >  1:2029874/1‑150 (MQ=255)
                                                                                                                                        aCGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGcaaca              >  1:1146420/1‑150 (MQ=255)
                                                                                                                                          gCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCaacaac            <  2:2503715/150‑1 (MQ=255)
                                                                                                                                           cTACGTAAAACGCGTACGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGCACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACg           <  1:3513711/150‑1 (MQ=255)
                                                                                                                                            tACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACgg          >  2:3231191/1‑150 (MQ=255)
                                                                                                                                             aCGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGc         >  1:543687/1‑150 (MQ=255)
                                                                                                                                               gTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTg       >  2:1051114/1‑150 (MQ=255)
                                                                                                                                               gTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTg       >  1:4381296/1‑150 (MQ=255)
                                                                                                                                               gTAAATCGCGTAAGTCTACGTTGCTGCGCCATACAAGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTg       >  2:3375187/1‑150 (MQ=255)
                                                                                                                                                tAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTgt      >  2:2531394/1‑149 (MQ=255)
                                                                                                                                                    tCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCt  <  2:2939675/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
GATGCTTTTCGCTGCATTTGGTCTTATGAGCCTGATGGTGCTAATTATTTGGGCGGTTGACCCGCAATATCGCCTGAATGCGATGATTGCCACCACCGTGGTGTTGCTGCTACTGGCACTGATTGGCGGTATCTGGACGCTACGTAAATCGCGTAAGTCTACGTTGCTGCGCCATACACGCCATGAGTTAGCAAACGATCGGCAGCTGCTCGAGGAGGAGTCCCGTGAGCAGTAAAGTCGAACGTGAACGACGTAAGGCGCAACTGCTTAGCCAGATCCAGCAACAACGGCTGGATCT  >  CP009273/3243212‑3243509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: