| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,312,862 | T→A | 6.7% | R289R (CGT→CGA) | argG → | argininosuccinate synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,312,862 | 0 | T | A | 6.7% | 913.8 / 43.9 | 282 | R289R (CGT→CGA) | argG | argininosuccinate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (130/133); new base A (4/15); total (134/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.80e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 | |||||||||||
Only 100 of 284 total aligned reads displayed.
GCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTC > CP009273/3312714‑3313011 | gCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTg < 2:1334684/150‑1 (MQ=255) tGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTAt > 2:2714910/1‑150 (MQ=255) gAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTAtt < 2:1474901/150‑1 (MQ=255) aCAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTa > 2:1532548/1‑150 (MQ=255) cAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTATAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTAc > 2:2304865/1‑150 (MQ=255) aaGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACg > 2:540500/1‑150 (MQ=255) tCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTcc < 1:2044307/150‑1 (MQ=255) tCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTcc < 2:3461980/150‑1 (MQ=255) ccGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCg < 2:3154816/150‑1 (MQ=255) cGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCgg < 1:4374623/150‑1 (MQ=255) ggTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCggg > 1:2689565/1‑150 (MQ=255) gTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCgggg > 2:3065791/1‑150 (MQ=255) ggCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGAt < 1:1675797/150‑1 (MQ=255) ggCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGAt < 1:4463805/150‑1 (MQ=255) cgcTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATgg > 2:1575931/1‑150 (MQ=255) tGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCAc > 1:3092678/1‑150 (MQ=255) aCGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCActgc < 1:2580312/150‑1 (MQ=255) cGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCActgct > 1:4241371/1‑150 (MQ=255) ggTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCActgctg < 1:2718447/150‑1 (MQ=255) aCCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACAtt < 1:3364012/150‑1 (MQ=255) aGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTAt < 2:2173209/150‑1 (MQ=255) cgacgaCGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGa < 1:2235201/150‑1 (MQ=255) cgacgaCGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGa > 1:2521145/1‑150 (MQ=255) cgacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACg < 1:3605691/150‑1 (MQ=255) gacgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGc < 1:3296481/150‑1 (MQ=255) acgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGcc < 2:2949444/150‑1 (MQ=255) acgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGcc > 2:3363686/1‑150 (MQ=255) acgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGcc > 1:1532249/1‑150 (MQ=255) acgTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGcc > 2:1038795/1‑150 (MQ=255) tAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGt < 1:846605/150‑1 (MQ=255) aGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGtt < 2:2825071/150‑1 (MQ=255) aGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGtt > 1:701326/1‑150 (MQ=255) gAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTg < 1:3665567/150‑1 (MQ=255) atgatgCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGAcc > 1:325427/1‑150 (MQ=255) gCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAt < 2:210127/150‑1 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt < 1:4512469/150‑1 (MQ=255) cTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTAtt < 2:403889/150‑1 (MQ=255) gAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTcac < 1:3379163/150‑1 (MQ=255) gAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTcac < 2:1150521/150‑1 (MQ=255) aGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACaa > 2:1704702/1‑150 (MQ=255) cTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACg > 1:4323335/1‑150 (MQ=255) aaCCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGaa < 1:796290/150‑1 (MQ=255) cGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGac < 1:4165389/150‑1 (MQ=255) cggcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCAt < 2:1977220/150‑1 (MQ=255) cggcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCAt < 2:3969655/150‑1 (MQ=255) ggcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCAtt > 2:1269596/1‑150 (MQ=255) gcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTg < 1:3907881/150‑1 (MQ=255) gcggTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTg < 2:933643/150‑1 (MQ=255) gtcgtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGc > 1:1558769/1‑150 (MQ=255) gtcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGt > 1:4379432/1‑150 (MQ=255) tcACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTa > 1:2898879/1‑150 (MQ=255) cACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTAt > 2:1752710/1‑150 (MQ=255) cGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCa < 1:1311128/150‑1 (MQ=255) ggCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCAc > 2:4579964/1‑150 (MQ=255) gggCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCa > 1:998607/1‑150 (MQ=255) gggAATGAGCGACCAGATTGAAAACCGTATCATCTAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGTCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACTAAGACACCATTGAGCAGTATCACGCGCa < 2:3245476/150‑1 (MQ=255) gCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATg < 1:3228765/150‑1 (MQ=255) gCATGAGCGACCAGATTGAAAACAGTATCATCGAAGCGAAAAGCCGTTGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGAAGTATCACGCGCATg < 1:2113903/150‑1 (MQ=255) cATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTTTTCACAACGAAGACACCATTGAGCAGTATCACGCGCATgg > 2:2422050/1‑150 (MQ=255) aTGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgt > 1:1836493/1‑150 (MQ=255) aTGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgt > 1:560916/1‑150 (MQ=255) aGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcgt > 2:1370709/1‑150 (MQ=255) aGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGgtcgt > 2:889759/1‑150 (MQ=255) gACCAGATTGAAAACCGTATCATAGAAGCGAAAAGCCGTGGTATTTACTAATCTCCGGGGAAGGCACTGCTGCACATTGCTTATGAACGCCTGTTGACCGGTATTCACAACGAATACACCATTGAGCAGTATCACGAGCATGGTCGTCAg > 2:483792/1‑150 (MQ=255) aCCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGt > 2:192529/1‑150 (MQ=255) aCCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGt > 2:3616472/1‑150 (MQ=255) aCCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGt < 2:3814508/150‑1 (MQ=255) aCCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGt < 1:1092552/150‑1 (MQ=255) ccAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGtt < 1:1081097/150‑1 (MQ=255) cAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTg > 2:3743928/1‑150 (MQ=255) aGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTgg < 2:324742/150‑1 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACCTTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct < 2:4475599/150‑1 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct < 1:2841822/150‑1 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct < 2:2558103/150‑1 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct < 1:3839345/150‑1 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct < 2:1877614/150‑1 (MQ=255) aaaCCGTATCATCGAAGCGAAAAGCCGAGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTct < 2:2687409/150‑1 (MQ=255) aaCCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTctg < 2:4297027/150‑1 (MQ=255) gTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGt > 1:1443420/1‑150 (MQ=255) atcatcGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTAc > 2:3954649/1‑150 (MQ=255) atcatcGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTAc > 2:2211669/1‑150 (MQ=255) catcGCAGCGCATAGGCGTGGGATTTTCGAAGGTGTGGGGATGGCACTGCTGCATATTGCGTTTGATCGCCTGTTGACTGGTATTCATAACGATGACAAGATTGAGCAGTATCACGCGCATGGTCGTCTGTTGGGCCGTCTGGTGTTCCa < 2:1662918/150‑1 (MQ=255) atcGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAg < 2:646836/150‑1 (MQ=255) tcGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAgt < 1:2304865/150‑2 (MQ=255) gAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAgggg < 2:1521448/150‑1 (MQ=255) aaGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGc > 1:1386935/1‑150 (MQ=255) aGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCg < 1:1038795/150‑1 (MQ=255) gCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGt < 2:3849518/150‑1 (MQ=255) gCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGt > 1:3165317/1‑150 (MQ=255) gAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTg < 2:701326/150‑1 (MQ=255) aaaaGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTgg < 1:1769923/150‑1 (MQ=255) aaaaGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTgg < 1:1937858/150‑1 (MQ=255) aaaGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGt < 1:3017742/150‑1 (MQ=255) aGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGttt < 1:2157111/150‑1 (MQ=255) aGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGttt < 1:456767/150‑1 (MQ=255) gCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTg < 2:415863/150‑1 (MQ=255) ccGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGa > 1:2485561/1‑150 (MQ=255) cGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGAc > 2:2005047/1‑150 (MQ=255) gTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACt > 1:4048438/1‑150 (MQ=255) tGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTc > 1:2414611/1‑150 (MQ=255) | GCTTTGAACAAGGTCATCCGGTGGCGCTGAACGGTAAAACCTTTAGCGACGACGTAGAAATGATGCTGGAAGCTAACCGCATCGGCGGTCGTCACGGCCTGGGCATGAGCGACCAGATTGAAAACCGTATCATCGAAGCGAAAAGCCGTGGTATTTACGAAGCTCCGGGGATGGCACTGCTGCACATTGCGTATGAACGCCTGTTGACCGGTATTCACAACGAAGACACCATTGAGCAGTATCACGCGCATGGTCGTCAGTTGGGCCGTCTGCTGTACCAGGGGCGTTGGTTTGACTC > CP009273/3312714‑3313011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |