| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 1,428,894 | IS2 (–) +5 bp | 100% | intergenic (‑413/+317) | ynaE ← / ← ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 1428894 = | 1 (0.000) | 344 (1.230) | 147/276 | NT | 99.7% | intergenic (‑413/+321) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | = 1463497 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
| * | ? | CP009273 | = 1428898 | 1 (0.000) | 267 (0.960) | 137/276 | NT | 99.6% | intergenic (‑417/+317) | ynaE/ttcC | cold shock protein, Rac prophage/pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related |
| ? | CP009273 | 1462167 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
Only 100 of 667 total aligned reads displayed.
TTGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGA > CP009273/1428746‑1429042 | tGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCt < 2:4105238/149‑1 (MQ=37) tcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTg < 2:3932966‑M1/3‑1 (MQ=255) ttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaa > 1:2650132‑M1/145‑149 (MQ=255) tgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTgaagaagaa < 1:4303427‑M1/11‑1 (MQ=255) gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGaaa > 2:2797736‑M1/138‑149 (MQ=255) tataCAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgc > 2:1772129‑M1/1‑140 (MQ=255) gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGaaaaa > 2:1402247‑M1/136‑149 (MQ=255) taCAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgccc < 2:4315195‑M1/149‑12 (MQ=255) aGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgccccta > 1:31487‑M1/1‑135 (MQ=255) gAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctata < 2:841628‑M1/149‑17 (MQ=255) gAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctata > 2:1873679‑M1/1‑133 (MQ=255) tctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGa < 2:3428817‑M1/25‑1 (MQ=255) tgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGata > 2:495628‑M1/123‑149 (MQ=255) tAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttcca > 1:4032196‑M1/1‑127 (MQ=255) aaCAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccag > 1:567363‑M1/1‑126 (MQ=255) cgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGAtata > 1:2785719‑M1/121‑149 (MQ=255) aCAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccaga > 2:953966‑M1/1‑125 (MQ=255) cAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagac < 1:1172318‑M1/149‑26 (MQ=255) aGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagaca > 1:997695‑M1/1‑123 (MQ=255) ttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGcc > 1:3557320‑M1/118‑149 (MQ=255) tctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCt > 2:471449‑M1/117‑149 (MQ=255) tctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCt > 1:1476273‑M1/117‑149 (MQ=255) ctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCta < 1:4233510‑M1/34‑1 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCtat > 1:764698‑M1/115‑149 (MQ=255) gcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgt < 2:130069‑M1/149‑32 (MQ=255) gcggcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgt > 2:2018319‑M1/1‑118 (MQ=255) ggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATg < 2:1659585‑M1/38‑1 (MQ=255) gcAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATATGAAtggatttgcccctatatttccagacatctgttat > 2:4448516‑M1/1‑115 (MQ=255) cctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCt < 2:1510186‑M1/41‑1 (MQ=255) aaaaTCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcac < 1:2258888‑M1/149‑38 (MQ=255) aagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTg > 1:2374993‑M1/106‑149 (MQ=255) tCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaa < 1:742841‑M1/149‑42 (MQ=255) tCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaa > 1:871079‑M1/1‑108 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGAt > 1:3450721‑M1/104‑149 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGAt > 1:3255722‑M1/104‑149 (MQ=255) gacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGAt > 1:2055214‑M1/104‑149 (MQ=255) gCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAGAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaaccca < 1:1820615‑M1/149‑46 (MQ=255) caatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCgga < 1:1321914‑M1/51‑1 (MQ=255) tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaatg < 1:1002140‑M1/57‑1 (MQ=255) tGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc > 1:3923222‑M1/1‑96 (MQ=255) ctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGgaatga > 1:4605310‑M1/92‑149 (MQ=255) tgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGTTGCGGAGgaatgaa < 2:701449‑M1/59‑1 (MQ=255) ttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGaatgaatg > 1:936606‑M1/89‑149 (MQ=255) aaagCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTTAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct > 1:2469221‑M1/2‑91 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGAt > 1:705944‑M1/85‑149 (MQ=255) gCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgcc > 1:336356‑M1/1‑88 (MQ=255) aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATgg < 1:1598562‑M1/67‑1 (MQ=255) aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATgg < 1:1737228‑M1/67‑1 (MQ=255) atgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGtgatatc < 1:1540248‑M1/68‑4 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGt < 1:2849961‑M1/71‑1 (MQ=255) tGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagata < 1:659386‑M1/149‑69 (MQ=255) gtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATg < 1:1662471‑M1/75‑1 (MQ=255) gCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt < 2:3241403‑M1/149‑71 (MQ=255) gCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatatt > 1:1938193‑M1/1‑79 (MQ=255) tctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGt > 2:3550545‑M1/74‑149 (MQ=255) ctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTa < 1:3840199‑M1/77‑1 (MQ=255) aaCTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcc < 1:1562887‑M1/149‑73 (MQ=255) aaCTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcc < 1:3081642‑M1/149‑73 (MQ=255) aCTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattccc > 2:3494201‑M1/1‑76 (MQ=255) aaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCt < 2:3730601‑M1/80‑1 (MQ=255) aaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTg < 2:2273959‑M1/81‑1 (MQ=255) cAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg < 1:2020441‑M1/149‑78 (MQ=255) cAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtgg < 1:1993964‑M1/149‑78 (MQ=255) gtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGt > 1:2302911‑M1/63‑149 (MQ=255) tattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGtt > 2:3062594‑M1/62‑149 (MQ=255) aTCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcg > 1:4353878‑M1/1‑66 (MQ=255) aTCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcg > 2:456063‑M1/1‑66 (MQ=255) ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGa < 2:4183519‑M1/90‑1 (MQ=255) ttATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgata < 1:4502086‑M1/149‑87 (MQ=255) gCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccc < 2:2123069‑M1/149‑91 (MQ=255) ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGACTGTGATGGGAGTGATGTATCTGAATAGTTGAAATAcc < 1:2939813‑M1/96‑1 (MQ=255) ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAAcc < 1:1266308‑M1/96‑1 (MQ=255) tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCg < 2:1602532‑M1/97‑1 (MQ=255) atcacttatttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGc > 1:2609450‑M1/52‑149 (MQ=255) atttaagtgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCAcg < 2:4756961‑M1/105‑1 (MQ=255) agtgatatgtgttgtctggagattcaggggtcctgtctaCTGAAGTAGAAAAATATCATGCTGATATAGCGTATATGCCTTTGATGCGTAGGTTTGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTa > 1:3672220‑M1/40‑149 (MQ=255) tgatattggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTTATGCGGAGGAATGTATGTGATGGGAGTGATGTATCTGAATAGTTGAATAACCGCAGTCACGTCGTATg < 2:2518204‑M1/112‑1 (MQ=255) tttAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattc < 2:3667503‑M1/149‑114 (MQ=255) ttAAAAGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcg < 2:1113602‑M1/149‑115 (MQ=255) ggttgtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAAc < 1:3202284‑M1/119‑1 (MQ=255) gtctggagattcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGtgc > 1:2401883‑M1/27‑149 (MQ=255) aaGTATACATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttat > 2:1198329‑M1/1‑31 (MQ=255) tataCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataat < 1:108842‑M1/149‑122 (MQ=255) ataCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatg > 2:462270‑M1/1‑27 (MQ=255) taCATAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgc > 2:44048‑M1/1‑26 (MQ=255) aTAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcg < 2:3353168‑M1/149‑127 (MQ=255) ttcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttgg > 2:3710642‑M1/18‑149 (MQ=255) tAGATAACAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcga > 1:3777884‑M1/1‑22 (MQ=255) tcagggggccagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCggttggt > 2:593900‑M1/17‑149 (MQ=255) cAGTTTTTATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctc < 2:2408715‑M1/149‑135 (MQ=255) cagtctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttg < 2:2871228‑M1/142‑1 (MQ=255) ttttATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgca > 2:2442339‑M1/1‑11 (MQ=255) ttATCTGAAtggatttgccactatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcaattcgttataatgctcgaacgcctctgcaag < 2:4011228‑M1/149‑141 (MQ=255) tctaCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTttgatt < 2:72486‑M1/145‑1 (MQ=255) tATCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaagg > 2:3833193‑M1/1‑8 (MQ=255) taCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGAGGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACGttgattga < 2:2631230‑M1/147‑1 (MQ=255) tCTGAAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggtt > 1:4685058‑M1/1‑6 (MQ=255) aCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTgag < 1:2175286‑M1/148‑1 (MQ=255) cTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTgaga < 2:3166028/149‑1 (MQ=255) cTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTgaga < 2:4541191/149‑1 (MQ=255) | TTGTCGTTTCAGGTATACAGGAATGCTAACAGGTGGCGGCAAAAATCAGGCGGTTTATGGCGCAAGCTGAAGTGGCAACTGCAAACTATCTTATGCAGAGACTCTACACGGATTGGGTTTAAAAGTATACATAGATAACAGTTTTTATCTGAAGAAGAAAAATATCAAGGTGATATAGCCTATATGCCTTTGATGCGGAGGAATGAATGTGATGGGAGTGATGTATCTGAATAGTTGAAAAACCGCAGTCACGTCGTATGCAAGAACGTGCTGCGGTTGGTTTGACTTTGATTGAGA > CP009273/1428746‑1429042 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |