New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 1549116 =281 (1.010)6 (0.020) 6/274 NT 2.2% coding (811/1698 nt) maeA malate dehydrogenase, (decarboxylating, NAD‑requiring) (malic enzyme)
?CP009273 = 1561885 257 (0.930)coding (1196/1320 nt) yddW liprotein, glycosyl hydrolase homolog
Rejected: Frequency below/above cutoff threshold.

Only 100 of 320 total aligned reads displayed.

CGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTATTC  >  CP009273/1548968‑1549263
                                                                                                                                                    |                                                                                                                                                   
tgttacaaagtaagaatgggagtttaactgccccagcgactttgcagatagctgaccgcttgttgagtctgcggtttattcagatagtcctcacggaacaagatggtgccgctaatttcgggcacagcatcgttaagatcgagctgctt                                                                                                                                                     >  2:1741102‑M1/149‑149 (MQ=255)
tgttacaaagtaagaatgggagtttaactgccccagcgactttgcagatagctgaccgcttgttgagtctgcggtttattcagatagtcctcacggaacaagatggtgccgctaatttcgggcacagcatcgttaagatcgagctgctt                                                                                                                                                     >  2:4130918‑M1/149‑149 (MQ=255)
 gcTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATg                                                                                                                                                    <  1:3565648/149‑1 (MQ=255)
    gggTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGACGACGATTTTTTTCTCGCGTAACTGACCACCTGCCGCGCGGCTTGCTGCGCTCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGACTGTcg                                                                                                                                                 >  1:1676132/1‑148 (MQ=255)
    gggTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCa                                                                                                                                                 <  2:362357/149‑1 (MQ=255)
    gggTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCa                                                                                                                                                 <  2:3279831/149‑1 (MQ=255)
    gggTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCa                                                                                                                                                 >  1:763148/1‑149 (MQ=255)
     ggTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCAt                                                                                                                                                <  1:2583529/149‑1 (MQ=255)
      gTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATc                                                                                                                                               >  1:4504871/1‑149 (MQ=255)
          gggAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTa                                                                                                                                           <  2:1609848/149‑1 (MQ=255)
            gagaTGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTaaa                                                                                                                                         <  2:4481117/149‑1 (MQ=255)
             agaTGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTaaaa                                                                                                                                        <  2:4584295/149‑1 (MQ=255)
              gatgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAg                                                                                                                                       <  1:1181496/149‑1 (MQ=255)
               atgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGa                                                                                                                                      <  2:2531578/149‑1 (MQ=255)
                tgatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGaa                                                                                                                                     >  1:3525787/1‑149 (MQ=255)
                 gatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAAc                                                                                                                                    <  2:1145017/149‑1 (MQ=255)
                 gatCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAAc                                                                                                                                    <  2:3109034/149‑1 (MQ=255)
                    cATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACaaa                                                                                                                                 <  2:1903652/149‑1 (MQ=255)
                      tttCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAAtt                                                                                                                               <  1:842364/149‑1 (MQ=255)
                         cGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCa                                                                                                                            <  1:4261233/149‑1 (MQ=255)
                           gCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATc                                                                                                                                               >  2:1455076/1‑128 (MQ=255)
                           gCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCAtt                                                                                                                          >  2:4335300/1‑149 (MQ=255)
                            cAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTg                                                                                                                         <  1:4656442/149‑1 (MQ=255)
                             taTGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGACTGTCATCGTTAAAAGAACAAATTTCATTGc                                                                                                                        <  2:3610544/148‑1 (MQ=255)
                             aaTGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGc                                                                                                                        >  1:3746605/1‑149 (MQ=255)
                                gCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGAt                                                                                                                     <  1:1439830/149‑1 (MQ=255)
                                gCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGAt                                                                                                                     <  2:3332664/149‑1 (MQ=255)
                                 cagcgactttgcagatagctgaccgcttgttgagtctgcggtttattcagatagtcctcacggaacaagatggtgccgctaatttcgggcacagcatcgttaagatcgagctgctTGTCATCGTTAAAAGAACAAATTTCATTGCGATa                                                                                                                    >  1:4196636‑M1/116‑149 (MQ=255)
                                   gCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGc                                                                                                                  <  1:1210561/149‑1 (MQ=255)
                                   gCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGGTAAAAGAACAAATTTCATTGCGATAGc                                                                                                                  >  1:4400877/1‑149 (MQ=255)
                                     aTCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCgg                                                                                                                >  1:980079/1‑149 (MQ=255)
                                      tCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGt                                                                                                               <  2:1659237/149‑1 (MQ=255)
                                           cTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGt                                                                                                          <  1:3925881/149‑1 (MQ=255)
                                           cTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGt                                                                                                          >  1:4424806/1‑149 (MQ=255)
                                            tGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTa                                                                                                         >  2:2313595/1‑149 (MQ=255)
                                             gAACCTGCGCCAAGGAAGACGATTTTGGTCTCGCGTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTaa                                                                                                        <  2:4010786/149‑1 (MQ=255)
                                              aaCCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAAc                                                                                                       <  2:1110772/149‑1 (MQ=255)
                                              aaCCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAAc                                                                                                       >  1:1621185/1‑149 (MQ=255)
                                               aCCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACg                                                                                                      >  2:2182411/1‑149 (MQ=255)
                                                   gcgcCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCAt                                                                                                  <  1:4678466/149‑1 (MQ=255)
                                                   gcgcCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCAt                                                                                                  <  2:4651129/149‑1 (MQ=255)
                                                    cgcCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATc                                                                                                 <  2:2440989/149‑1 (MQ=255)
                                                      ccAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGc                                                                                               >  2:3746920/1‑149 (MQ=255)
                                                       cAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCa                                                                                              >  2:2673887/1‑149 (MQ=255)
                                                         aGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCAtt                                                                                            >  2:3059904/1‑149 (MQ=255)
                                                          ggAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAAGTTCATTGCGATAGCGGTTAAGTAACGGCATCGCAttt                                                                                           >  1:2273353/1‑149 (MQ=255)
                                                            aaGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCAttttt                                                                                         >  1:636597/1‑149 (MQ=255)
                                                            aaGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCAttttt                                                                                         <  1:3406439/149‑1 (MQ=255)
                                                                     tttttCTCGCTGAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCaaa                                                                                <  1:4095585/149‑1 (MQ=255)
                                                                      gtttCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAg                                                                               <  2:1878897/148‑1 (MQ=255)
                                                                         tctcGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCt                                                                            <  2:393320/149‑1 (MQ=255)
                                                                               ttAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAAc                                                                      >  2:2701644/1‑149 (MQ=255)
                                                                               ttAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAAc                                                                      <  2:3977000/149‑1 (MQ=255)
                                                                                tAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACt                                                                     <  1:1320396/149‑1 (MQ=255)
                                                                                  aCTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGc                                                                   <  1:2463323/149‑1 (MQ=255)
                                                                                  aCTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGc                                                                   <  1:2919381/149‑1 (MQ=255)
                                                                                       ccaccTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAg                                                              >  2:1037058/1‑149 (MQ=255)
                                                                                         ctcacggaacaagatggtgccgctaatttcgggcacagcatcgttaagatcgagctgctTGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCa                                                            >  1:697279‑M1/60‑149 (MQ=255)
                                                                                         accTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCa                                                            <  2:1392596/149‑1 (MQ=255)
                                                                                         accTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCa                                                            >  1:3057823/1‑149 (MQ=255)
                                                                                          ccTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCAc                                                           >  1:2522270/1‑149 (MQ=255)
                                                                                             gCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTc                                                        <  2:3157447/149‑1 (MQ=255)
                                                                                                gcgcgGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTgg                                                     <  1:1170398/149‑1 (MQ=255)
                                                                                                  gcgGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGcc                                                   <  2:722438/149‑1 (MQ=255)
                                                                                                     gCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGc                                                <  1:3474980/149‑1 (MQ=255)
                                                                                                          ctgcGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCgttgt                                           <  1:661702/149‑1 (MQ=255)
                                                                                                           tgcGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCgttgtt                                          <  1:3982811/149‑1 (MQ=255)
                                                                                                             cGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTATGGGGGTCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTc                                        <  2:4746637/149‑1 (MQ=255)
                                                                                                               aTCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTcac                                      >  2:2052710/1‑149 (MQ=255)
                                                                                                               aTCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTcac                                      <  1:3449834/149‑1 (MQ=255)
                                                                                                                    tgtgCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCt                                 <  1:4237510/149‑1 (MQ=255)
                                                                                                                    tgtgCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCt                                 <  2:4216177/149‑1 (MQ=255)
                                                                                                                    tgtgCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCt                                 >  2:1309226/1‑149 (MQ=255)
                                                                                                                     gtgCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTg                                >  2:1465414/1‑149 (MQ=255)
                                                                                                                     gtgCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTg                                >  2:1404471/1‑149 (MQ=255)
                                                                                                                      ggCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATGTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTgg                               <  2:3847093/148‑1 (MQ=255)
                                                                                                                          gACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATaa                           <  2:2902575/149‑1 (MQ=255)
                                                                                                                           aCTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATaaa                          <  1:4325987/149‑1 (MQ=255)
                                                                                                                              gcatcgttaagatcgagctgctTGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATtc                       <  2:3507243‑M1/127‑1 (MQ=255)
                                                                                                                              gTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATtc                       >  1:1873568/1‑149 (MQ=255)
                                                                                                                                 aCCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATtcatc                    >  1:957698/1‑149 (MQ=255)
                                                                                                                                 aCCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATtcatc                    <  1:1016065/149‑1 (MQ=255)
                                                                                                                                   cgccgcAGTGCCCTGAATGTCATCTTTAAAAGAAAAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCaa                  <  2:4193275/149‑1 (MQ=255)
                                                                                                                                       gcAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGaa              <  2:4706102/149‑1 (MQ=255)
                                                                                                                                       gcAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGaa              <  1:3226039/149‑1 (MQ=255)
                                                                                                                                       gcAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGaa              <  2:3631272/149‑1 (MQ=255)
                                                                                                                                       gcAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGaa              >  2:1021971/1‑149 (MQ=255)
                                                                                                                                        cAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAAt             <  1:2859217/149‑1 (MQ=255)
                                                                                                                                         aGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCA‑TTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTc           >  2:1102631/1‑149 (MQ=255)
                                                                                                                                          gTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTc           <  2:2622379/149‑1 (MQ=255)
                                                                                                                                          gTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTc           <  2:3534685/149‑1 (MQ=255)
                                                                                                                                           tGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCa          <  1:1459930/149‑1 (MQ=255)
                                                                                                                                            gCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCAt         <  1:1940508/149‑1 (MQ=255)
                                                                                                                                               cTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGt      >  1:4635379/1‑149 (MQ=255)
                                                                                                                                                 gAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTAt    <  1:479622/149‑1 (MQ=255)
                                                                                                                                                 gAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTAt    >  2:2767262/1‑149 (MQ=255)
                                                                                                                                                  aaTGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTAtt   >  2:921164/1‑149 (MQ=255)
                                                                                                                                                  aaTGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTAtt   >  2:3665039/1‑149 (MQ=255)
                                                                                                                                                   aTGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTATtc  <  1:2349909/149‑1 (MQ=255)
                                                                                                                                                   aTGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTATtc  <  2:1713739/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CGCTGGGTCTGGGAGATGATCATTTCGGCAATGCCGCATCCCGCTGAACCTGCGCCAAGGAAGACGATTTTTTTCTCGCTTAACTGACCACCTGCCGCGCGGCTTGCTGCGATCAGTGTGCCGACTGTTACCGCCGCAGTGCCCTGAATGTCATCGTTAAAAGAACAAATTTCATTGCGATAGCGGTTAAGTAACGGCATCGCATTTTTTTGAGCAAAGTCTTCAAACTGCAACAGCACGTCTGGCCAGCGTTGTTTCACAGCCTGGATAAATTCATCAACGAATTCATAGTATTC  >  CP009273/1548968‑1549263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.