| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,332,632 | G→T | 10.8% | L265I (CTT→ATT) | mlaF ← | ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,332,632 | 0 | G | T | 10.8% | 965.6 / 55.6 | 279 | L265I (CTT→ATT) | mlaF | ABC transporter maintaining OM lipid asymmetry, ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (123/125); new base T (11/20); total (134/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 280 total aligned reads displayed.
CGCATGTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAG > CP009273/3332485‑3332780 | cgcATGTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGa < 2:767606/149‑1 (MQ=255)cgcATGTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGa < 2:3157531/149‑1 (MQ=255) aTGTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCa > 2:374825/1‑149 (MQ=255) tGTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAg > 2:562256/1‑149 (MQ=255) tGTTTGCGAAATTCCGGTTTGCCGACCAGAGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCGTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTGAACTCCCTGGTAAAATATCAg > 1:197809/1‑149 (MQ=255) gTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGc > 2:2314734/1‑149 (MQ=255) tGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTg < 2:408289/149‑1 (MQ=255) aaaTTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACATCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATaa < 1:191824/149‑1 (MQ=255) tCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGGATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGc < 1:647898/149‑1 (MQ=255) ccGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGAt < 1:3710579/149‑1 (MQ=255) ccGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGGTCTCAGGGTTTTACTCCCTTTAGGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGAt < 2:3338278/149‑1 (MQ=255) cGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATa > 2:3316003/1‑149 (MQ=255) gACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAg > 2:3469110/1‑149 (MQ=255) aCCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGc > 2:1345694/1‑149 (MQ=255) cAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcgg < 2:937671/149‑1 (MQ=255) aGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcgga < 2:334294/149‑1 (MQ=255) cgcATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCCGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcggaac < 1:1346242/149‑1 (MQ=255) gcATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcggaacg > 2:1702894/1‑149 (MQ=255) gcATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcggaacg > 1:1605627/1‑149 (MQ=255) cATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcggaacgg < 1:1047382/149‑1 (MQ=255) ttGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGcggaacggaa > 2:689791/1‑149 (MQ=255) tGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCggaacggaac < 2:4486683/149‑1 (MQ=255) gAATAACATTAACCCGGCCCGCCCGAACGTTCTCCGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACa < 2:1092277/149‑1 (MQ=255) gAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACa < 2:2973168/149‑1 (MQ=255) gAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGACCa > 2:1021560/1‑149 (MQ=255) aaCATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGcc > 2:4290112/1‑149 (MQ=255) ttAACCCCGCCCGCACGATAGTTCTAAGGGTTTTACTCCCTTTATGTCCGAGCGACGCCAGCGAATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTc < 2:137091/149‑1 (MQ=255) aaCCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAg > 2:2345113/1‑149 (MQ=255) aCCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGc < 1:876491/149‑1 (MQ=255) aCCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGc > 2:202112/1‑149 (MQ=255) aCCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGc > 1:4726957/1‑149 (MQ=255) ccGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTa < 2:141081/149‑1 (MQ=255) ccGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTa > 1:830631/1‑149 (MQ=255) ccGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTa < 2:2307077/149‑1 (MQ=255) gcccgcccGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATcc < 2:1179075/149‑1 (MQ=255) cGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAAc < 2:2215578/149‑1 (MQ=255) gTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACt > 2:2632209/1‑149 (MQ=255) ttCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTg > 1:2503407/1‑149 (MQ=255) ttCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTg > 2:4437838/1‑149 (MQ=255) ttCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATAAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTg > 1:1125709/1‑149 (MQ=255) tctcAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGa < 1:4687515/149‑1 (MQ=255) tcAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACg > 1:4582109/1‑149 (MQ=255) aGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTa > 2:1850714/1‑149 (MQ=255) aGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTa < 1:1444361/149‑1 (MQ=255) ggTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTAcg > 2:814639/1‑149 (MQ=255) tttAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTAcgcgc < 2:341210/149‑1 (MQ=255) aTCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATACTCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGAt < 1:3603915/149‑1 (MQ=255) cccTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCa < 1:2628423/149‑1 (MQ=255) cccTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCa < 1:4295716/149‑1 (MQ=255) cccTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCa > 2:2726180/1‑149 (MQ=255) cTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAgg > 1:2267476/1‑149 (MQ=255) tttATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGa < 2:4625095/149‑1 (MQ=255) ttATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGAt < 1:2188199/149‑1 (MQ=255) tATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGAtt < 2:492693/149‑1 (MQ=255) tCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGcc < 2:2562001/149‑1 (MQ=255) ccGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCt < 2:3833571/149‑1 (MQ=255) gAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGc > 1:3279271/1‑149 (MQ=255) gCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCaa < 1:3089530/149‑1 (MQ=255) cGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAAc < 1:3974663/149‑1 (MQ=255) cGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAAc < 1:3312702/149‑1 (MQ=255) cGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGcc < 1:4078707/149‑1 (MQ=255) cGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGcc < 1:320154/149‑1 (MQ=255) ccAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTg < 1:2124803/149‑1 (MQ=255) ccAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTg < 1:3879905/149‑1 (MQ=255) ccAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTg < 1:3879533/149‑1 (MQ=255) cAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTgg < 1:2577770/149‑1 (MQ=255) cAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTgg > 2:2987411/1‑149 (MQ=255) cAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTgg < 1:341132/149‑1 (MQ=255) gcgcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGc > 2:1289272/1‑149 (MQ=255) gcgcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGc > 2:1962854/1‑149 (MQ=255) gcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCAc < 2:1215934/149‑1 (MQ=255) gcATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCAc > 2:4570710/1‑149 (MQ=255) cATTGAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACt < 2:943321/149‑1 (MQ=255) aTTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTg > 2:1564633/1‑149 (MQ=255) tAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCa > 1:955026/1‑149 (MQ=255) tAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCa < 1:1702894/149‑1 (MQ=255) cAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGa < 1:2323304/149‑1 (MQ=255) aGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAg < 2:4013255/149‑1 (MQ=255) aGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAg > 1:2716314/1‑149 (MQ=255) gCATGAGTGGCTTAACTCCCTGGTAAAATATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGc > 1:2471649/1‑149 (MQ=255) aTGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGa < 2:2114278/149‑1 (MQ=255) tGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGAc > 1:1555206/1‑149 (MQ=255) gTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAt > 1:3523091/1‑149 (MQ=255) gCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAtttt < 2:3780015/149‑1 (MQ=255) cTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAttttt > 2:1649429/1‑149 (MQ=255) tAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAttttttt < 1:1487637/149‑1 (MQ=255) tAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAAttttttt > 2:367459/1‑149 (MQ=255) aCTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGt > 1:1188143/1‑149 (MQ=255) tCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTcc > 1:2899123/1‑149 (MQ=255) tCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTcc > 2:3863202/1‑149 (MQ=255) cTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGcc > 1:3325068/1‑149 (MQ=255) cTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGcc < 2:2392878/149‑1 (MQ=255) tGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCa > 1:2018077/1‑149 (MQ=255) ggTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAg < 1:416626/149‑1 (MQ=255) ggTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAg < 2:124477/149‑1 (MQ=255) gTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAgg > 1:864389/1‑149 (MQ=255) gTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAgg > 1:1308889/1‑149 (MQ=255) aaaaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCggcgtggg > 2:1213108/1‑142 (MQ=255) aaaaGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGAt < 1:4463253/149‑1 (MQ=255) gATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAg > 2:815610/1‑149 (MQ=255) | CGCATGTTTGCGAAATTCCGGTTTGCCGACCAGCGCATTGAATAACATTAACCCGGCCCGCCCGAACGTTCTCAGGGTTTTAATCCCTTTATGTCCGAGCGACGCCAGCGCATTTAACAGCATGAGTGGCTTAACTCCCTGGTAAAAGATCAGCGTGATAATCGCCGGCAGGATAGCGGAACGGAACAGGCCCGTCAGCTATCCCGTCCAGAAACTGACGTACGCGCGGATCAGGATTCGCCTGCAACGCCTGGGCACTGCCATGAGCGACAATTTTTTTGTCCGCCAGGATCCAG > CP009273/3332485‑3332780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |