| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,498,214 | T→G | 8.6% | intergenic (+72/+80) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,498,214 | 0 | T | G | 8.6% | 327.2 / 15.0 | 185 | intergenic (+72/+80) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (49/117); new base G (5/14); total (54/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 192 total aligned reads displayed.
ACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAT > CP009273/3498066‑3498362 | aCAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGt < 1:1188853/149‑1 (MQ=255)aCAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGt < 1:2277115/149‑1 (MQ=255) cAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGtt > 1:3858062/1‑149 (MQ=255) cAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGtt > 2:1054712/1‑149 (MQ=255) tGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAc < 1:733086/149‑1 (MQ=255) cACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAc‑cc < 1:2447180/149‑1 (MQ=255) aCGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAc‑cca > 2:770541/1‑148 (MQ=255) tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAc < 2:203832/149‑1 (MQ=255) tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAc < 2:927107/149‑1 (MQ=255) tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAc < 1:2341246/149‑1 (MQ=255) tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAc < 1:2341429/149‑1 (MQ=255) tctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTGCCCCTCAC‑CC‑TAAc > 2:1877747/1‑149 (MQ=255) ctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAcc < 1:2794178/149‑1 (MQ=255) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCGCAC‑CC‑GAAacc > 2:3387706/1‑149 (MQ=255) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAccc < 1:2175042/149‑1 (MQ=255) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAAccc < 1:2454006/149‑1 (MQ=255) tcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACAA‑CC‑AAAccc > 2:3387660/1‑149 (MQ=255) ccGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTCGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCCCAC‑CC‑CAAccca > 2:542067/1‑148 (MQ=255) cGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACAC‑CC‑AAAaccac > 2:3872347/1‑147 (MQ=255) cGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCctc < 2:1253220/149‑1 (MQ=255) cGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCctc < 2:3679012/149‑1 (MQ=255) aaCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTGCCCCACAC‑CC‑AAAcccccac > 2:1519363/1‑145 (MQ=255) aCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑Tcc < 1:2577911/149‑1 (MQ=255) aCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑Tcc < 1:1580393/149‑1 (MQ=255) ctctTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTAAATCCCGTACGTTGCCCACAC‑CC‑CAAaccccaaac > 2:1676289/1‑143 (MQ=38) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑Tcccc < 2:1711660/149‑1 (MQ=255) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAgggg < 2:2070151/149‑1 (MQ=255) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAgggg < 2:760732/149‑1 (MQ=255) gcgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCg < 1:1054712/149‑1 (MQ=255) gcgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCg < 1:4544035/149‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAgg < 1:1072536/149‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCGCCC‑CC‑CAAACCTC‑TACCCCAAGGGGCGAgg > 2:3743455/1‑149 (MQ=38) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAggg < 1:1887305/149‑1 (MQ=255) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAggg < 1:2927012/149‑1 (MQ=255) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGCTGCTGGCGCGTTGAATTTTACATCCCGTACGGTGCCCCCCC‑CC‑AAAACCACAACCCCAAAAGGGCGgggg > 2:2044131/1‑149 (MQ=37) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCTCAC‑CC‑TAACCCTC‑TACCCAAAGGGGCGAgggg > 2:799570/1‑149 (MQ=255) aTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGGCCACAA‑CC‑AAAACCAC‑AACCCAAAGGGGCGAGGGGa > 2:71159/1‑149 (MQ=38) tCGCATCACCTTAACTATTGATAATAAAAGACCTTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGAc < 2:606946/149‑1 (MQ=255) aTCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCCCCC‑CC‑AAACCCAC‑ACCCCCAAAGGGCGAGGGGACCggt > 2:360149/1‑147 (MQ=38) aTCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACAC‑CC‑CAACCCGC‑TACCCCAAGGGGGGAGGGGACCggt > 2:360258/1‑147 (MQ=38) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCGCAC‑CCAAAACCAAA‑ACCCCAAAGgggggggggggcgagg > 1:3831598/1‑143 (MQ=37) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCGCAC‑CC‑GAACCCAC‑ACCCCCAAAGGGCGCGGGGGCCgggc > 2:4667040/1‑146 (MQ=37) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCTCAC‑CC‑AAAACCAC‑TACCCCAACGGGCGAGGGGACCGGTc > 2:4297474/1‑149 (MQ=38) cACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCCCCA‑CC‑AAACCCAA‑ACCCCCAAAGGGCGCGGGGAccctgca > 1:3007622/1‑144 (MQ=37) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTAGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTAc < 2:4156877/149‑1 (MQ=255) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGaa < 1:2114335/149‑1 (MQ=255) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCCC‑CC‑TAACCCTC‑AACCCAAAGGGGCGGCGGGGCCGTTCCGGACGGaa > 2:3816722/1‑149 (MQ=38) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCCCAC‑CC‑CAAACCAC‑AACCCAAAGGGGCGCGGGGGCCCTTAATTACGGaa > 2:3817393/1‑149 (MQ=37) tATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAt < 1:1596034/149‑1 (MQ=255) tATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACAC‑CC‑AAACCCAC‑ACCCCAAACGGGCGAGGGGCCCCGTCACTACCGaaa > 2:1962606/1‑148 (MQ=37) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTa < 2:1509472/149‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTa < 2:1140053/149‑1 (MQ=255) taataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGACTTTTACATCCCGTACGTTCCCCTCAC‑CC‑AAAACCAC‑TACCCAAAGGGGCGTGGGGCCCGTTCAGTACGGAATTTTGCt > 2:4183647/1‑149 (MQ=38) taataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCt < 1:469558/149‑1 (MQ=255) taaAAGACCTTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑GAACCCTC‑TCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 2:991612/149‑1 (MQ=255) taaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTAGCCAAACACC‑AAACCCCA‑AACCCCAA‑GGGCGGGGGGGCCGATGATTAAAGAATTTAGCTTGa > 2:1292228/1‑149 (MQ=19) aaaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGAc < 1:556182/149‑1 (MQ=255) aaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACgg < 2:3529954/149‑1 (MQ=255) aaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACgg < 1:4393203/149‑1 (MQ=255) gACATTCACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TCACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTg < 2:3814562/149‑1 (MQ=255) cATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCt < 2:3880946/149‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTAt < 1:4788842/149‑1 (MQ=255) tatccGTAGGCCGGTTAAGTTGCGCCTGCATCGCATCCGGCGATGCTGTCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCACACAGGGGCGAGGGGACAGTTCAGTCCGGAATTTAGCTTGACTGTGCTATc < 2:2299878/146‑1 (MQ=38) aaCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATcc < 1:3538309/149‑1 (MQ=255) ccGTAGGCCGGATAAGATGCGCCAGCATAGCATCCGGCGATGCTGGAGCGTTGAATTTTACATCCCGTACGTTACCCGCAA‑CC‑AAAACCAA‑AACCCCAAAGGGCGATGGGACCCGTCAGTAACGAAATAATCTTGAACGGGGTATCCac > 2:1384128/1‑148 (MQ=16) cGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACAC‑CC‑AAAACCAC‑TCCCCAAAGGGGCGATGGGACCGTTCAATACGGAATTTAGCGTGACGGTGCAATACAGc > 2:2363103/1‑149 (MQ=38) gTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TCACCCTC‑TCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCa < 2:478550/149‑1 (MQ=255) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCAt < 1:3402185/149‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaa < 1:327577/149‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 2:1187008/149‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 2:1206430/149‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 1:669185/149‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 1:975665/149‑1 (MQ=255) aGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACCTCCCGGACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGc < 2:4046620/149‑1 (MQ=255) gcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 2:1169509/149‑1 (MQ=255) gcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 1:4297056/149‑1 (MQ=255) gcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 1:2719032/149‑1 (MQ=255) gcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCACAGGGGCGTGGGGTCCGGTCAGGACGGTAGTTCTCTTGACGGTGCTAGCCAGGCGTAAATAAGGGCCATAct > 2:3024904/1‑149 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 2:642800/149‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 2:4718895/149‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 1:3762357/149‑1 (MQ=255) catcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCAc < 1:451453/149‑1 (MQ=255) gcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACAC‑CC‑AAAACCTC‑AACCCCAAGGGGCGAGGGGTCCGTGCACTAAGGAATTTATCTTGACGGTGCTATCCAGCAATAAATAATGGCAAAACACACACCCaa > 2:2908221/1‑149 (MQ=255) cGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑AAACCCTC‑TACCCAAAGGGGCGAGGGGCCCGTTCAGTACGGCAATTAGCTTTACGGTGCTATACAGCAATAAAAACGGGGAATAAACACACGCAAAAtaa > 2:3112408/1‑147 (MQ=255) gCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgc < 1:1929089/149‑1 (MQ=255) gCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAc < 1:1241365/149‑1 (MQ=255) gCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAc < 2:881587/149‑1 (MQ=255) gcgTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGtctc < 1:2436302/149‑1 (MQ=255) cgTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACACTC‑TCCCCAAAGGGGCTAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCATCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTctct < 2:251244/149‑1 (MQ=255) gAATTTTACAGCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCAc < 1:2109630/149‑1 (MQ=255) gAATTTGCCATCCCGTACGGTCCCCGCAC‑CC‑TACCCCTC‑TCCCCACAGGGGCGAGGGGACCGTTCAGTCCGGAATTTCGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATCCTCTCACGCAAACTCCGCAGCACCGTCTCTTCAc < 2:1457511/149‑1 (MQ=255) aaTTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCAcc < 2:4446548/149‑1 (MQ=255) tCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGAtt < 2:2655755/149‑1 (MQ=255) ccccTACGGTCCCCTCAC‑CC‑TCACCCTC‑TCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTGAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTc < 1:4604359/149‑1 (MQ=255) cGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCgg < 1:631713/149‑1 (MQ=255) cGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCgg < 1:630804/149‑1 (MQ=255) cGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTa > 2:1771469/1‑149 (MQ=255) cGTTCCCCTCAC‑CC‑TAACCCTC‑AACCCAAATGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCAAACGCAAAATACGCAGCACCGTCTCTTCAACGCTGCGATTCGGGTTa > 2:1771405/1‑149 (MQ=38) gTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTaa < 1:4162006/149‑1 (MQ=255) ttCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAt < 1:755146/149‑1 (MQ=255) | ACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAC‑CC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAT > CP009273/3498066‑3498362 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |