| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,502,584 | C→A | 8.7% | D197Y (GAT→TAT) | yhfW ← | phosphopentomutase‑related metalloenzyme superfamily protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,502,584 | 0 | C | A | 8.7% | 922.2 / 39.9 | 253 | D197Y (GAT→TAT) | yhfW | phosphopentomutase‑related metalloenzyme superfamily protein |
| Reads supporting (aligned to +/- strand): ref base C (126/105); new base A (9/13); total (135/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 255 total aligned reads displayed.
GGCACGCCTGCTTCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAA > CP009273/3502436‑3502732 | ccTGCTTCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAAt < 1:1861095/149‑1 (MQ=255) ccTGCTTCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAAt < 2:816914/149‑1 (MQ=255) ccTGCTTCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAAt > 1:1834132/1‑149 (MQ=255) gCTTCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGAGGCATCGAGAATGCg > 1:2253789/1‑149 (MQ=255) ttCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGtt > 1:518932/1‑149 (MQ=255) tCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTg < 2:543381/149‑1 (MQ=255) cATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGa < 1:2841864/149‑1 (MQ=255) aTACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGAc < 1:2211305/149‑1 (MQ=255) cAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGt > 1:2546706/1‑149 (MQ=255) aCCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGcc > 1:621601/1‑149 (MQ=255) aCCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGcc > 2:1807688/1‑149 (MQ=255) cTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGccac < 1:3738549/149‑1 (MQ=255) gCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGccacca > 2:1331644/1‑149 (MQ=255) cTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGTCTGTCGGTTAACAGGCCACCAAAt < 1:2338583/149‑1 (MQ=255) tttttCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATg > 1:4022375/1‑149 (MQ=255) tttttCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATg < 2:2475498/149‑1 (MQ=255) ttttCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGt < 1:3872901/149‑1 (MQ=255) ttCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTaa < 1:372204/149‑1 (MQ=255) cATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATg > 2:3063730/1‑149 (MQ=255) aTCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGa > 2:2844952/1‑149 (MQ=255) tCGACGCCATAGCCCATATGCACGACCTTGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGAc < 2:3300412/149‑1 (MQ=255) tCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGAc > 2:1727982/1‑149 (MQ=255) tCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGAc > 2:1727900/1‑149 (MQ=255) tCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGAc > 1:3945233/1‑149 (MQ=255) cGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGAcc < 2:634604/149‑1 (MQ=255) cGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGAcc > 1:4127987/1‑149 (MQ=255) gCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACccgac > 2:867392/1‑149 (MQ=255) ccATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACccgacc > 1:4376324/1‑149 (MQ=255) aTAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACccgaccga > 2:3973022/1‑149 (MQ=255) gCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCt < 2:205830/149‑1 (MQ=255) gCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCt > 2:4381594/1‑149 (MQ=255) atGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCt < 1:448989/149‑1 (MQ=255) atGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCt > 1:2074935/1‑149 (MQ=255) tGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTg > 2:89830/1‑149 (MQ=255) gCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGc < 2:600756/149‑1 (MQ=255) aCGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGTTc > 2:1076090/1‑149 (MQ=255) aCGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTc > 1:2044452/1‑149 (MQ=255) cGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTca < 2:4093249/149‑1 (MQ=255) ccTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTcacgc > 1:3300777/1‑149 (MQ=255) cTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTcacgca > 1:3185493/1‑149 (MQ=255) cTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTcacgca > 1:2721698/1‑149 (MQ=255) tGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTcacgcac < 1:875570/149‑1 (MQ=255) aaaCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGAt < 2:2203369/149‑1 (MQ=255) aaaCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGAt < 2:4183059/149‑1 (MQ=255) aaCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATa < 1:3290713/149‑1 (MQ=255) aaCCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATa > 2:1265616/1‑149 (MQ=255) ccGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACg > 2:1673733/1‑149 (MQ=255) gTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGAc < 2:3950849/149‑1 (MQ=255) gTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCaa < 2:4135237/149‑1 (MQ=255) cATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAtt > 1:1353301/1‑149 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTTGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt > 2:1176337/1‑149 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTTGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt > 2:392694/1‑149 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt > 2:921328/1‑149 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt < 1:2601820/149‑1 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt < 1:1084942/149‑1 (MQ=255) aTAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAAttt < 2:2945627/149‑1 (MQ=255) aGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGa > 2:1042585/1‑149 (MQ=255) aGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGa < 1:3616193/149‑1 (MQ=255) aGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGa > 2:4496213/1‑149 (MQ=255) aGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGa > 2:4262544/1‑149 (MQ=255) gcgcCAGAACGCGGCGCAGTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACACGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGAt > 1:3210486/1‑149 (MQ=255) gcCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTg > 1:3461621/1‑149 (MQ=255) ccAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGc > 1:1910479/1‑149 (MQ=255) aGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGcgt > 1:786728/1‑149 (MQ=255) gAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGcgtc < 2:3774529/149‑1 (MQ=255) cgcgGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCgtcgtc < 2:1295941/149‑1 (MQ=255) cgcgGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCgtcgtc < 2:3686672/149‑1 (MQ=255) cgcgGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCgtcgtc < 2:2304992/149‑1 (MQ=255) gcgcATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCaaaa < 1:1244257/149‑1 (MQ=255) gcATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAaga > 1:4662455/1‑149 (MQ=255) cATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAagag < 2:3277292/149‑1 (MQ=255) gATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATca > 1:1044821/1‑149 (MQ=255) aTACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATcac < 1:689408/149‑1 (MQ=255) ccAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACaga > 1:2683815/1‑149 (MQ=255) tAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAgagaga < 2:2718786/149‑1 (MQ=255) aaaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAt > 2:2153600/1‑149 (MQ=255) aaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAtt > 2:4307518/1‑149 (MQ=255) aaGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAtt > 1:2894904/1‑149 (MQ=255) aaGCGCCCTTCTTTGCTTTCTGCGGCATAGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGAtt < 1:4341876/149‑1 (MQ=255) aGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTg > 1:2130193/1‑149 (MQ=255) aGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTg > 1:4528078/1‑149 (MQ=255) gcCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCg < 2:572049/149‑1 (MQ=255) gcCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCg < 2:571691/149‑1 (MQ=255) cccTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCgg < 1:3151166/149‑1 (MQ=255) ccTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGt < 2:1821808/149‑1 (MQ=255) ccTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGt > 2:3247895/1‑149 (MQ=255) ttttCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGt > 2:2871561/1‑149 (MQ=255) tttGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGt > 2:3563242/1‑149 (MQ=255) ttGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGtt < 1:4612207/149‑1 (MQ=255) tGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTta > 1:4742031/1‑149 (MQ=255) cTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTtata > 2:2669945/1‑149 (MQ=255) cTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTtata < 2:4667429/149‑1 (MQ=255) tGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCt > 2:3497899/1‑149 (MQ=255) gCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGcc > 2:1513945/1‑149 (MQ=255) gCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGcc > 2:2622594/1‑149 (MQ=255) cATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCt < 1:257552/149‑1 (MQ=255) cATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCt < 1:3026954/149‑1 (MQ=255) cATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCt < 2:3337909/149‑1 (MQ=255) cATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCt > 2:91995/1‑149 (MQ=255) cATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCt < 1:416881/149‑1 (MQ=255) | GGCACGCCTGCTTCATACAGTTTTTGTGGCACCTGCACTTTTTCATCGACGCCATAGCCCATATGCACGACCTGGAAACCGTTGTCATAAGCGCCAGAACGCGGCGCATTGATACCAATAAAGCGCCCTTCTTTGCTTTCTGCGGCATCGAGAATGCGTTGACTGTCGGTTAACAGGCCACCAAATGTAATGACCCGACCGACCTGTACCTGCTCACGCACGATACGACCAATTTTGATTGCGTCGTCAAAAGAGATCACAGAGAGATTGGCGGTAATGTTATAGACCTGGCCTAAA > CP009273/3502436‑3502732 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |