| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,522,018 | G→T | 9.9% | intergenic (+55/‑10) | yrfF → / → yrfG | inner membrane protein/GMP/IMP nucleotidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,522,018 | 0 | G | T | 9.9% | 978.8 / 47.7 | 274 | intergenic (+55/‑10) | yrfF/yrfG | inner membrane protein/GMP/IMP nucleotidase |
| Reads supporting (aligned to +/- strand): ref base G (134/112); new base T (12/16); total (146/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 290 total aligned reads displayed.
GCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGC > CP009273/3521870‑3522166 | gCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGgag > 1:3663947/1‑149 (MQ=255)gCGTCATCGCACTCGCATGATGGAGATTCAGGCCTAATATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGgag < 2:3902729/149‑1 (MQ=255) cGTCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGgaga < 2:3643501/149‑1 (MQ=255) tCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGAtt > 2:4654887/1‑149 (MQ=255) tCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTGTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGAtt > 2:2423089/1‑149 (MQ=255) cATCGCACTCGCATGATGGAGATTCAGGCATATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGAttt < 2:42385/149‑1 (MQ=255) tCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTcc > 1:3836372/1‑149 (MQ=255) gCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCt > 1:4301346/1‑149 (MQ=255) gatgGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATc < 2:803688/149‑1 (MQ=255) ggAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAAc > 1:2141482/1‑149 (MQ=255) gaTTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACAtt < 1:3316657/149‑1 (MQ=255) gaTTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACAtt > 2:3121638/1‑149 (MQ=255) cAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCCTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCt < 1:267664/149‑1 (MQ=255) aGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTg > 2:4705487/1‑149 (MQ=255) cTATTATGACAGCTGCCTGAACCCGCAACTGAACACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAg < 2:3214113/149‑1 (MQ=255) tattatGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAgg < 2:144415/149‑1 (MQ=255) ttatGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGAc < 1:3475386/149‑1 (MQ=255) ttatGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGAc > 2:3407867/1‑149 (MQ=255) tatGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACg > 1:662148/1‑149 (MQ=255) tGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTa > 2:4434061/1‑149 (MQ=255) tGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTa < 2:4184366/149‑1 (MQ=255) tGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTa > 2:3355856/1‑149 (MQ=255) tGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCAGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCACATGCATATCAACATTGCCTGGCAGGACGTa > 2:3777203/1‑149 (MQ=255) aaGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGAt > 1:1941691/1‑149 (MQ=255) aGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCACATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATa > 2:481265/1‑149 (MQ=255) aGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATa < 2:4054910/149‑1 (MQ=255) cTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATAcc < 2:287123/149‑1 (MQ=255) gCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGt > 1:2982613/1‑149 (MQ=255) tGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTct < 1:1441150/149‑1 (MQ=255) cGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGa < 1:4706900/149‑1 (MQ=255) aaCTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGatat < 1:2877181/149‑1 (MQ=255) aaCTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGatat < 2:4341140/149‑1 (MQ=255) cTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATTCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATgg > 2:3975363/1‑149 (MQ=255) aTCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACg > 2:1911585/1‑149 (MQ=255) tCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACgg > 1:1716697/1‑149 (MQ=255) cACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGAGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGc > 2:167676/1‑149 (MQ=255) ccccTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCAc < 2:4593348/149‑1 (MQ=255) cTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGtt < 2:2736651/149‑1 (MQ=255) cTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGtt < 1:1456333/149‑1 (MQ=255) ttCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTg > 1:3177569/1‑149 (MQ=255) gAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACTGCACTTTGCTCg > 1:3002908/1‑149 (MQ=255) gAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTCTCGCGCAAATTGCTTCACTCTGGAGAATTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCg > 2:1816067/1‑149 (MQ=255) aaGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGAc < 1:1388920/149‑1 (MQ=255) aaGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGAc < 2:3652835/149‑1 (MQ=255) aaGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGAc > 1:626888/1‑149 (MQ=255) aGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGAcc < 2:680171/149‑1 (MQ=255) aGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGAcc < 2:653614/149‑1 (MQ=255) aGCCTTATCGAATAACACGGTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGAcc < 2:3044978/149‑1 (MQ=255) cTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCg > 1:2777138/1‑149 (MQ=255) cTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCg > 1:4789104/1‑149 (MQ=255) ttATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGc > 1:2507599/1‑149 (MQ=255) tATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGcc > 2:2250822/1‑149 (MQ=255) tCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCtt < 2:101983/149‑1 (MQ=255) aaTAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGGTGCTCGACCTCGCCTTCGa > 1:2305813/1‑149 (MQ=255) aaTAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCAGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCAGGATATGGACGGCACGTTGCGCGACCTCGCCTTCGa > 1:2209997/1‑149 (MQ=255) aTAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGAt < 2:3287785/149‑1 (MQ=255) aaCACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATaa > 1:840096/1‑149 (MQ=255) acacGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAAc < 1:4137747/149‑1 (MQ=255) tttGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTAttt < 1:1812549/149‑1 (MQ=255) tttGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTAttt > 2:2119009/1‑149 (MQ=255) gcgcGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTg > 2:4221670/1‑149 (MQ=255) cgcgGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTgg < 1:1475899/149‑1 (MQ=255) gcgGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTGCGATAACTATTTCTGGc > 1:68568/1‑149 (MQ=255) ggCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCaa > 2:1126285/1‑149 (MQ=255) ggCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCGCGCCTTCGATAACTATTTCTGGCaa > 2:2499784/1‑149 (MQ=255) gCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCaaa > 1:442015/1‑149 (MQ=255) cAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCaaaa < 1:3981888/149‑1 (MQ=255) cAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCaaaa < 1:1090065/149‑1 (MQ=255) cAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCaaaa < 1:4215166/149‑1 (MQ=255) cAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCaaaa < 1:12857/149‑1 (MQ=255) ggTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGc < 1:770708/149‑1 (MQ=255) ggTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGc > 1:358527/1‑149 (MQ=255) gTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCt > 2:2308869/1‑149 (MQ=255) ttATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTg < 2:1497991/149‑1 (MQ=255) ttATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTg < 1:2071483/149‑1 (MQ=255) ttATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTg > 1:1564861/1‑149 (MQ=255) tATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTgg < 1:3121638/149‑1 (MQ=255) aTGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGt < 2:3487234/149‑1 (MQ=255) tACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCt < 1:4760818/149‑1 (MQ=255) tACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCt < 1:3501722/149‑1 (MQ=255) aCCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCGTATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTg > 2:956908/1‑149 (MQ=255) cccTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGa > 1:3960975/1‑149 (MQ=255) cccTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGa > 1:4136497/1‑149 (MQ=255) cTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGaaa < 1:490706/149‑1 (MQ=255) cTGTCGCGCAAATTGCGTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGaaa < 2:2785287/149‑1 (MQ=255) tGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAAc > 2:1162461/1‑149 (MQ=255) gTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACa > 1:3802310/1‑149 (MQ=255) gcgcAAATTGCTTCACTCTGGATATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATgg > 2:1964591/1‑149 (MQ=255) gcgcAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATgg < 1:3458920/149‑1 (MQ=255) gcgcAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATgg < 1:4493386/149‑1 (MQ=255) aaTTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGgcgc > 1:1075303/1‑149 (MQ=255) aTTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGCTGCCTGAAACATGGGGcgcg > 2:2601550/1‑149 (MQ=255) ttCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGaaaaa > 1:4339594/1‑149 (MQ=255) ttCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGaaaaa > 1:2568880/1‑149 (MQ=255) tctGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACgggg < 2:704324/149‑1 (MQ=255) ctGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGt < 1:741556/149‑1 (MQ=255) ggAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTa > 1:560932/1‑149 (MQ=255) gaTTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGc > 1:4042983/1‑149 (MQ=255) gaTTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGc > 2:1534829/1‑149 (MQ=255) gaTTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGc > 2:2109857/1‑149 (MQ=255) | GCGTCATCGCACTCGCATGATGGAGATTCAGGCCTATTATGAAAGCTGCCTGAACCCGCAACTGATCACCCCTTCAGAAAGCCTTATCGAATAACACGTTTGCGCGGCAGGTTATGCTACCCTGTCGCGCAAATTGCTTCACTCTGGAGATTTCCCTCATGCATATCAACATTGCCTGGCAGGACGTAGATACCGTTCTGCTGGATATGGACGGCACGTTGCTCGACCTCGCCTTCGATAACTATTTCTGGCAAAAGCTGGTGCCTGAAACATGGGGCGCGAAAAACGGGGTTACGC > CP009273/3521870‑3522166 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |