| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,532,054 | C→A | 5.9% | D437E (GAC→GAA) | yhgF → | putative transcriptional accessory protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,532,054 | 0 | C | A | 5.9% | 1078.7 / 25.6 | 278 | D437E (GAC→GAA) | yhgF | putative transcriptional accessory protein |
| Reads supporting (aligned to +/- strand): ref base C (137/124); new base A (5/12); total (142/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.08e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 278 total aligned reads displayed.
ACAGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACGCAGTA > CP009273/3531908‑3532201 | cAGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGtt < 1:10332/149‑1 (MQ=255) cAGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGtt < 2:2346274/149‑1 (MQ=255) aGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCGGGATCTCGACGttt > 1:1772742/1‑149 (MQ=255) aGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGttt < 1:4569980/149‑1 (MQ=255) gCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGAAGTTTc < 2:1278580/149‑1 (MQ=255) ttCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGc < 2:1354347/149‑1 (MQ=255) tCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCt < 1:3204935/149‑1 (MQ=255) aaaCTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGgc > 1:4070514/1‑149 (MQ=255) aaCTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGgcg > 2:1506301/1‑149 (MQ=255) gCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGgtgt < 1:1728544/149‑1 (MQ=255) gCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGgtgt > 1:4507281/1‑149 (MQ=255) ttCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTAt < 2:1016593/149‑1 (MQ=255) ttCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTAt < 2:3307655/149‑1 (MQ=255) tCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATc < 1:436010/149‑1 (MQ=255) tctcGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATcgccc > 1:3395390/1‑149 (MQ=255) tctcGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGAAGTTTCGCTGCGTGGCGCGGTGTCTATcgccc < 2:629209/149‑1 (MQ=255) tcGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATcgcccgc > 1:932977/1‑149 (MQ=255) tcGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATcgcccgc > 1:4697567/1‑149 (MQ=255) aGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAg > 2:1106249/1‑149 (MQ=255) aGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGAt > 1:673546/1‑149 (MQ=255) gCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATc > 1:3612493/1‑149 (MQ=255) gTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGc > 1:4095208/1‑149 (MQ=255) ttCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCt < 2:2712766/149‑1 (MQ=255) ttCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCt > 2:3117716/1‑149 (MQ=255) cccGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTgg < 1:1942483/149‑1 (MQ=255) cccGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTgg < 1:4332414/149‑1 (MQ=255) aaaGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTACACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGa > 2:80554/1‑149 (MQ=255) aGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGc < 1:4425962/149‑1 (MQ=255) aGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGc < 1:4218843/149‑1 (MQ=255) gACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTgg < 2:1952169/149‑1 (MQ=255) aCCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGt > 2:1383647/1‑149 (MQ=255) aCCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGt < 2:3907711/149‑1 (MQ=255) ccGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTg > 1:882166/1‑149 (MQ=255) cgcgCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGa < 1:2054763/149‑1 (MQ=255) gcgcAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGaa < 1:1405181/149‑1 (MQ=255) cAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAAt < 1:1646649/149‑1 (MQ=255) cAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAAt < 2:3607672/149‑1 (MQ=255) aGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATc < 2:2981511/149‑1 (MQ=255) gAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCg > 1:2568839/1‑149 (MQ=255) aaGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGAt > 2:4447518/1‑149 (MQ=255) aaGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGAt < 2:3392577/149‑1 (MQ=255) gTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATcc < 1:4371378/149‑1 (MQ=255) gTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGAAGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATcc < 1:4561072/149‑1 (MQ=255) tAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGAAGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCg > 2:2660679/1‑149 (MQ=255) tCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGaaa < 2:4070514/149‑1 (MQ=255) gTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATc > 2:734371/1‑149 (MQ=255) gTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATc < 1:531963/149‑1 (MQ=255) gTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCGTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGAAGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATc < 2:2917224/149‑1 (MQ=255) tCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCt < 2:2451524/149‑1 (MQ=255) cAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTa > 1:3298253/1‑149 (MQ=255) cAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTa < 2:3987264/149‑1 (MQ=255) gCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATc > 2:4635492/1‑149 (MQ=255) gCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATc > 1:2167601/1‑149 (MQ=255) gCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATc < 2:3539105/149‑1 (MQ=255) gAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCgg > 1:1007521/1‑149 (MQ=255) aaGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGc > 2:3483627/1‑149 (MQ=255) aGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCg > 1:1555253/1‑149 (MQ=255) gCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGt < 1:3661900/149‑1 (MQ=255) ggCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAgg > 1:3868781/1‑149 (MQ=255) ggCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAgg > 2:3158001/1‑149 (MQ=255) gcgcGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGt < 1:2366152/149‑1 (MQ=255) gcgTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCa > 2:492603/1‑149 (MQ=255) gTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGt < 1:4192173/149‑1 (MQ=255) tCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTa > 1:3894868/1‑149 (MQ=255) ttttACTCGGCTTCCGAGCTGGATGCACAGGAGTTCCCTGATCTCGACGTTTCTCTGCGTGGCGCGGTGTCTATCTCCCGCAGTTTGCAGGATCCGCTGGCTGAGCTTGTTACTCTCGATCCGAAATCTTTAGGCGTAGGTCAGTATCa < 2:4278853/148‑1 (MQ=255) gTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCa > 2:1647843/1‑149 (MQ=255) gTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCa < 2:177447/149‑1 (MQ=255) gTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCa < 1:767866/149‑1 (MQ=255) tttACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAg > 1:2831993/1‑149 (MQ=255) tACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCa < 2:457073/149‑1 (MQ=255) tACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCa < 1:3397246/149‑1 (MQ=255) tCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGa > 1:3409444/1‑149 (MQ=255) gCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGt > 1:2937663/1‑149 (MQ=255) gCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGt < 2:163563/149‑1 (MQ=255) gCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGAAGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGt < 2:2636722/149‑1 (MQ=255) cTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTc < 1:4646269/149‑1 (MQ=255) ttCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCa < 1:1494564/149‑1 (MQ=255) ccGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGc < 2:3810946/149‑1 (MQ=255) tggctgCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACg > 1:1181567/1‑149 (MQ=255) ggctgCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGc > 1:3467398/1‑149 (MQ=255) tgCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAAc < 1:3973696/149‑1 (MQ=255) cacaGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTg > 2:4166047/1‑149 (MQ=255) cacaGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTg < 2:2297761/149‑1 (MQ=255) caGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGc < 1:837317/149‑1 (MQ=255) aGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGcc < 2:227709/149‑1 (MQ=255) aGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGcc < 1:1355108/149‑1 (MQ=255) cccGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAAc < 2:4697567/149‑1 (MQ=255) cccGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAAc < 1:1106249/149‑1 (MQ=255) cccGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAAc > 1:3451094/1‑149 (MQ=255) cccGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAAc < 2:3103546/149‑1 (MQ=255) cGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTg < 1:3080613/149‑1 (MQ=255) cGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTg > 1:2674854/1‑149 (MQ=255) ggATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTgg > 1:2395708/1‑149 (MQ=255) ggATCTCGAAGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTgg > 2:1689152/1‑149 (MQ=255) gATCTCGACGTTTTGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGa < 1:1859100/149‑1 (MQ=255) gATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGa > 1:2272873/1‑149 (MQ=255) aTCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGAc < 1:2634860/149‑1 (MQ=255) tctcGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACg > 2:2092448/1‑149 (MQ=255) ctcGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACGc > 2:846319/1‑149 (MQ=255) aCGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACGCagta > 1:961354/1‑149 (MQ=255) | ACAGCTTCCCGCGAAACTGAGCGTTTCTATCTCGATGTGCAGAAGCAGTTCCCGAAAGTGACCGCGCAGAAAGTAATCGTCAGCGAAGCAGGCGCGTCGGTTTACTCGGCTTCCGAGCTGGCTGCACAGGAGTTCCCGGATCTCGACGTTTCGCTGCGTGGCGCGGTGTCTATCGCCCGCCGTTTGCAGGATCCGCTGGCGGAGCTGGTGAAAATCGATCCGAAATCTATCGGCGTAGGTCAGTATCAGCATGACGTCAGCCAGACGCAACTGGCCCGCAAACTGGACGCAGTA > CP009273/3531908‑3532201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |