| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,542,876 | T→G | 5.4% | N185T (AAC→ACC) | malQ ← | 4‑alpha‑glucanotransferase (amylomaltase) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,542,876 | 0 | T | G | 5.4% | 907.4 / 38.1 | 307 | N185T (AAC→ACC) | malQ | 4‑alpha‑glucanotransferase (amylomaltase) |
| Reads supporting (aligned to +/- strand): ref base T (149/141); new base G (12/5); total (161/146) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.96e-01 | |||||||||||
Only 100 of 310 total aligned reads displayed.
AACTGCCACCAGGCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTATTCAGCAACGC > CP009273/3542729‑3543024 | cTGCCACCAGGCCTGAGCCTCTTCTCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCa < 1:105959/149‑1 (MQ=255) ccaccaGGCCTGAGCCTCTTCGCTAAGATGTAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGc < 1:3596171/149‑1 (MQ=255) ccaccaGGCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGc > 2:1576535/1‑149 (MQ=255) accaGGCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCa > 1:3440670/1‑149 (MQ=255) ccaGGCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCaa > 2:3187525/1‑149 (MQ=255) aGGCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATg > 2:4431994/1‑149 (MQ=255) ggCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGa < 2:2958607/149‑1 (MQ=255) ggCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGa < 1:935455/149‑1 (MQ=255) ggCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGa < 2:4378959/149‑1 (MQ=255) gCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGaa > 2:2125572/1‑149 (MQ=255) ccTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGACCCGGGTTCAGGCCAATGAACGACCCg > 2:143619/1‑149 (MQ=255) ctctTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGc > 1:640109/1‑149 (MQ=255) cTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATTGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGttt < 2:3656671/149‑1 (MQ=255) cTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAACGAACGACCCGCCACGttt < 2:1267659/149‑1 (MQ=255) tAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGtttt > 1:4331958/1‑149 (MQ=255) aaGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTg > 1:1163270/1‑149 (MQ=255) gATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGcc < 2:3988503/149‑1 (MQ=255) aTGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCca > 1:4031165/1‑149 (MQ=255) aTGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCca > 1:3362465/1‑149 (MQ=255) aTGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCca > 1:2682367/1‑149 (MQ=255) gAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAGCGACCCGCCACGTTTTGCCACAt > 2:4706871/1‑149 (MQ=255) gAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACAt > 2:306729/1‑149 (MQ=255) aaaTCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATc < 2:2407596/149‑1 (MQ=255) aTCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATcca < 1:3737842/149‑1 (MQ=255) tCTTCAACGGCGTTAACGTCTATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATccac < 1:1348340/149‑1 (MQ=255) ttCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATccacca > 2:4456342/1‑149 (MQ=255) ttCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATccacca > 2:247061/1‑149 (MQ=255) cAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGc > 2:2843444/1‑149 (MQ=255) aaCGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCa < 1:3306683/149‑1 (MQ=255) aaCGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCa < 2:1042430/149‑1 (MQ=255) aCGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCAt > 2:1150899/1‑149 (MQ=255) cGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATc < 1:692394/149‑1 (MQ=255) gCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGc > 2:1758459/1‑149 (MQ=255) gCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGc < 1:1544853/149‑1 (MQ=255) aaCGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTga > 2:2233632/1‑149 (MQ=255) aaCGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTga < 1:1952386/149‑1 (MQ=255) aaCGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTga > 2:1078043/1‑149 (MQ=255) aaCGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTga > 2:4630892/1‑149 (MQ=255) aCGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTgag > 1:1202180/1‑149 (MQ=255) gTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGAt > 1:771652/1‑149 (MQ=255) gATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGc > 2:1083634/1‑149 (MQ=255) atatAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGcc > 1:1918185/1‑149 (MQ=255) atatAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGcc > 2:1457155/1‑149 (MQ=255) tataAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATcatga < 2:3234163/149‑5 (MQ=255) tataAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCa > 2:3915002/1‑149 (MQ=255) ataAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCaa > 1:3856731/1‑149 (MQ=255) ataAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCaa < 1:2544294/149‑1 (MQ=255) aaaTCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCaaaa < 1:1120097/149‑1 (MQ=255) acaTTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATcccc < 1:2753093/149‑1 (MQ=255) caTTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGACTCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCa > 2:724197/1‑149 (MQ=255) caTTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCa > 1:3059610/1‑149 (MQ=255) aTTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCaa < 2:591559/149‑1 (MQ=255) aTTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCaa < 1:3557115/149‑1 (MQ=255) aTTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCaa < 1:2108269/149‑1 (MQ=255) cAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCa > 1:14447/1‑149 (MQ=255) cAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCa < 2:4331958/149‑1 (MQ=255) cAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCa > 1:2561766/1‑149 (MQ=255) gCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGtttt > 2:2296532/1‑149 (MQ=255) gCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGtttt > 2:2532345/1‑149 (MQ=255) cGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGttttt < 2:1989378/149‑1 (MQ=255) gagaAGAGGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCAAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGtttttt < 1:3674049/149‑1 (MQ=255) gagaAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGtttttt < 2:3837375/149‑1 (MQ=255) agaagaCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGttttttt > 2:3978430/1‑149 (MQ=255) gaagaCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTc < 1:1525522/149‑1 (MQ=255) gaagaCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTc > 1:4684507/1‑149 (MQ=255) agaCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCg > 1:2370121/1‑149 (MQ=255) gaCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGa > 1:2000261/1‑149 (MQ=255) gaCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGa > 1:3897916/1‑149 (MQ=255) aCGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGAt < 1:4147601/149‑1 (MQ=255) cGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATc < 1:1403637/149‑1 (MQ=255) gCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCa < 1:817183/149‑1 (MQ=255) gCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGGTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCa < 2:4182708/149‑1 (MQ=255) cTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAg > 2:1805564/1‑149 (MQ=255) tGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGGTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGc > 2:3828252/1‑149 (MQ=255) gTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCg > 1:4432226/1‑149 (MQ=255) gTATGGGCTGGCGCTCTCCGGATGTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCg < 2:4600759/149‑1 (MQ=255) gggCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGtata < 2:3772289/149‑1 (MQ=255) cTGGCGCTCGCCGGAGTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTGTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAACATCCCCCATACCCCAGTTTTTTTCCGCTCGCAGCGTATAAAg < 2:2581241/149‑1 (MQ=255) gcgcTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCACGACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTg < 2:1348974/149‑1 (MQ=255) gcTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGaa < 2:640109/149‑1 (MQ=255) tctcCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACg > 2:4548831/1‑149 (MQ=255) ctcCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGc < 1:4630892/149‑1 (MQ=255) tcCGGATTTGCCGGATAGAGCGCATGAATCGGGGTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCa > 2:274697/1‑149 (MQ=255) ccGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAg < 1:1988610/149‑1 (MQ=255) aTTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCAc < 1:314604/149‑1 (MQ=255) aTTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCAc < 2:2171628/149‑1 (MQ=255) tttGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCAcc < 1:3551093/149‑1 (MQ=255) tttGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCAcc < 1:1713169/149‑1 (MQ=255) tGCCGGATAGAGCGCATGAATCGGGGTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCAcccc < 2:3436933/149‑1 (MQ=255) ccGGATTGAGCGCATGAATCGGGTTCTGGCCATTGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCcac < 1:2166204/149‑1 (MQ=255) ccGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCcac < 1:2208646/149‑1 (MQ=255) gATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGc < 1:2915089/149‑1 (MQ=255) tAGAGCGCATGAATCGGGGTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCtt > 2:882937/1‑149 (MQ=255) agagCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCttt > 1:2252255/1‑149 (MQ=255) gcgcATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGt < 2:1923950/149‑1 (MQ=255) aTGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTAt > 2:1265812/1‑149 (MQ=255) aaTCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTATTCa < 1:3666746/149‑1 (MQ=255) aaTCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTATTCa > 2:3378202/1‑149 (MQ=255) cGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTATTCAGCa > 1:3238137/1‑149 (MQ=255) ttCAGGACAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTATTCAGCAACGc < 1:1280374/149‑1 (MQ=255) | AACTGCCACCAGGCCTGAGCCTCTTCGCTAAGATGGAAATCTTCAACGGCGTTAACGTCGATATAAATCACATTCAGCCAACGGCGAGAAGACGGGCTGTATGGGCTGGCGCTCTCCGGATTTGCCGGATAGAGCGCATGAATCGGGTTCAGGCCAATGAACGACCCGCCACGTTTTGCCACATCCACCAGCATCGCTTTGAGATCGCCAAAATCCCCAATACCCCAGTTTTTTTCCGATCGCAGCGTATAAAGCTGAACGCAGGCACCCCACAGCTTTTGTTTATTCAGCAACGC > CP009273/3542729‑3543024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |