| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,564,984 | C→A | 7.0% | E627* (GAA→TAA) | glgB ← | 1,4‑alpha‑glucan branching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,564,984 | 0 | C | A | 7.0% | 965.4 / 29.7 | 256 | E627* (GAA→TAA) | glgB | 1,4‑alpha‑glucan branching enzyme |
| Reads supporting (aligned to +/- strand): ref base C (133/105); new base A (10/8); total (143/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 261 total aligned reads displayed.
CGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCAC > CP009273/3564836‑3565132 | cGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTc < 1:3460442/149‑1 (MQ=255) gCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCa > 1:4749613/1‑149 (MQ=255) ggCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACgg < 1:1712133/149‑1 (MQ=255) gCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACggg > 2:4027869/1‑149 (MQ=255) gCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACggg < 2:1015471/149‑1 (MQ=255) tGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTc > 2:4782958/1‑149 (MQ=255) tGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTc < 2:182976/149‑1 (MQ=255) tttATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCaaa < 2:164588/149‑1 (MQ=255) aTGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATc > 2:2028568/1‑149 (MQ=255) tGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATcc > 2:33524/1‑149 (MQ=255) tGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATcc < 1:4469529/149‑1 (MQ=255) gAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGtt < 2:3031549/149‑1 (MQ=255) gAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGtt > 1:577625/1‑149 (MQ=255) aaGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGACGTACGGGTCAAAATCCAGTTc < 1:1537974/149‑1 (MQ=255) aGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCa < 1:1232539/149‑1 (MQ=255) aGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCa < 2:1696240/149‑1 (MQ=255) gCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCAt > 1:2240440/1‑149 (MQ=255) aTAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCa > 2:3526535/1‑149 (MQ=255) tAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCAt < 2:2887023/149‑1 (MQ=255) aTCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTg > 2:4631175/1‑149 (MQ=255) tGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCttt > 2:3151935/1‑149 (MQ=255) gACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTa < 1:393902/149‑1 (MQ=255) gACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTa < 2:4421198/149‑1 (MQ=255) gTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTAtggtgg < 2:545611/149‑1 (MQ=255) ccGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCgg > 2:1905230/1‑149 (MQ=255) gCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAg > 1:2119112/1‑149 (MQ=255) gCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCAGTGCTTTATGGTGGCGGTAg > 1:1737634/1‑149 (MQ=255) tAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACCAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGGTCATGCATTGCTTTATGGTGGCGGTAGGTg < 1:2006406/149‑1 (MQ=255) tAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTg > 2:2314949/1‑149 (MQ=255) tAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTg > 1:367291/1‑149 (MQ=255) aaaGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGa > 1:573645/1‑149 (MQ=255) aaGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAg > 2:4285416/1‑149 (MQ=255) aGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAgg < 2:4518538/149‑1 (MQ=255) gTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGt > 2:790461/1‑149 (MQ=255) ttACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGtt < 1:4350347/149‑1 (MQ=255) tACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTTGGTGAGGTTc < 1:1219910/149‑1 (MQ=255) aCTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCa < 1:2420191/149‑1 (MQ=255) cTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAg > 2:2383914/1‑149 (MQ=255) tGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGa > 2:1187251/1‑149 (MQ=255) ggCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGAt < 1:2314949/149‑1 (MQ=255) gCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATc < 1:4246661/149‑1 (MQ=255) gCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATc > 2:606291/1‑149 (MQ=255) cGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCgcgc > 1:4019212/1‑149 (MQ=255) cGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCgcgc < 1:3283370/149‑1 (MQ=255) cGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCgcgc < 1:712060/149‑1 (MQ=255) gatgatTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCa > 2:2230718/1‑149 (MQ=255) cGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGc < 1:4215101/149‑1 (MQ=255) cGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGc < 1:1085465/149‑1 (MQ=255) gTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCt > 1:1754237/1‑149 (MQ=255) gTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCt < 1:4782958/149‑1 (MQ=255) tACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTgg > 2:3003853/1‑149 (MQ=255) tACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTgg > 1:1809464/1‑149 (MQ=255) cccTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGac < 1:2973635/149‑1 (MQ=255) cccTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGac > 1:3802026/1‑149 (MQ=255) tctTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACAcc > 2:368970/1‑149 (MQ=255) ttATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCgtg < 1:361567/149‑1 (MQ=255) tATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCCTTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCgtgg > 1:2578172/1‑149 (MQ=255) tCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCgtggtg > 2:956673/1‑149 (MQ=255) tCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCgtggtg > 2:1667784/1‑149 (MQ=255) gcgACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGcc < 2:4730733/149‑1 (MQ=255) gcgACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGcc < 1:3183026/149‑1 (MQ=255) gACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAg > 1:3134330/1‑149 (MQ=255) aCGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGt < 1:1989279/149‑1 (MQ=255) aCGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGt > 1:2391376/1‑149 (MQ=255) aCGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGt > 1:3016983/1‑149 (MQ=255) cGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGtt < 1:4592852/149‑1 (MQ=255) gCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTa < 1:1399695/149‑1 (MQ=255) cacaAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTAt > 1:4280474/1‑149 (MQ=255) cacaAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTAt < 2:2954685/149‑1 (MQ=255) acaAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATc > 2:2140408/1‑149 (MQ=255) aaaGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATcgc < 2:2269295/149‑1 (MQ=255) aaaGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATcgc > 2:2575226/1‑149 (MQ=255) aaGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCTCGCACCAGACGCTGGACACCGTGGTGCCAGTTATcgcc > 2:1265461/1‑149 (MQ=255) aGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATcgccg > 2:2819952/1‑149 (MQ=255) aTCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCgccgcc < 2:3545879/149‑1 (MQ=255) tCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCt < 1:1198441/149‑1 (MQ=255) tCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCt > 2:4232096/1‑149 (MQ=255) gCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTcc > 2:2336/1‑149 (MQ=255) gCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTcc > 2:2421692/1‑149 (MQ=255) gAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAg > 2:1046800/1‑149 (MQ=255) gCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGAt > 2:2506018/1‑149 (MQ=255) gTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGc > 2:4349704/1‑149 (MQ=255) ttCTTTTACATCCACCAACAGCCATTAAAAGCCGTACGGGTCAAAATCAAGATCATGAATAGCTATATGGTGGCGGTAGGTGAGGTACACATCGCTCACCAGACTCTGGACACCGTGGTGCCAGTTATCTCCGCCTTCCAACAGATGcc > 2:1541107/1‑149 (MQ=255) ttCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGcc > 1:2085912/1‑149 (MQ=255) tCTTTGTCATCCACCACCAGCCATTAAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCa > 2:2831083/1‑149 (MQ=255) cTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAg < 1:284500/149‑1 (MQ=255) ggTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCg < 2:4110947/148‑1 (MQ=255) gTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGa < 2:2020415/149‑1 (MQ=255) gTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGa > 1:636787/1‑149 (MQ=255) tCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCAGTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCt > 1:1561929/1‑149 (MQ=255) ccaccaccaGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTg < 1:595130/149‑1 (MQ=255) ccaccaGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTGATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCg > 2:3743083/1‑149 (MQ=255) caccaGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGt > 1:3471529/1‑149 (MQ=255) ccaGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCa < 1:1898144/149‑1 (MQ=255) aGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCCGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATg < 2:3243984/149‑1 (MQ=255) aGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATg > 2:2991000/1‑149 (MQ=255) ccATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGt < 2:2705462/149‑1 (MQ=255) cATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGtt > 1:2908041/1‑149 (MQ=255) ttCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTcc > 2:3062302/1‑149 (MQ=255) cAAAGCCGGACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCAc < 2:2284243/149‑1 (MQ=255) | CGCCATTTGCCCGGCTGGTTTATGCCGAAGCGATAATCATGACGCGGTACCGGCGTAAAGTTACTGGCAACGATGATTTCGTTACCCTCTTTATCGCGACGCACAAAGATCAGCACCGAGCGTTCTTTGTCATCCACCACCAGCCATTCAAAGCCGTACGGGTCAAAATCCAGTTCATGCATTGCTTTATGGTGGCGGTAGGTGAGGTTCAGATCGCGCACCAGACGCTGGACACCGTGGTGCCAGTTATCGCCGCCTTCCAACAGATGCCAGTCGAGGCTGGCGTCATGGTTCCAC > CP009273/3564836‑3565132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |