| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,582,484 | G→T | 5.3% | V19V (GTC→GTA) | ugpC ← | glycerol‑3‑phosphate transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,582,484 | 0 | G | T | 5.3% | 1021.8 / 19.0 | 264 | V19V (GTC→GTA) | ugpC | glycerol‑3‑phosphate transporter subunit |
| Reads supporting (aligned to +/- strand): ref base G (127/122); new base T (10/5); total (137/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 270 total aligned reads displayed.
TCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCC > CP009273/3582336‑3582632 | tCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATg < 1:3349727/149‑1 (MQ=255) cACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGa > 1:4553394/1‑149 (MQ=255) cACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGa > 1:1254744/1‑149 (MQ=255) gcgcTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCt < 1:46465/149‑1 (MQ=255) gcTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTgg < 2:4754532/149‑1 (MQ=255) tGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCCTCCGCCACATCAAGGGTCAGCGGTTTACTGACCTGGGt > 2:2876375/1‑149 (MQ=255) tGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGt < 1:2673025/149‑1 (MQ=255) gTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCCCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGttt > 1:823546/1‑149 (MQ=255) tCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGtttt < 2:2724013/149‑1 (MQ=255) cGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTa < 1:739386/149‑1 (MQ=255) gTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTAc > 2:1374743/1‑149 (MQ=255) gATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCAt > 1:3181364/1‑149 (MQ=255) gATCCAGATATCGCCTTCGGTCACCCGCTCCAGCGCGGCACCCATGCGCAGCCGCGTCGATTTCCCGCAGCCAGACGGCCCGACCCGCACGATAAGTTCGCCATGCGCCACAGCCAGGGGCCGCGGGGTATTGTCCTGGGttgtgccct > 2:3742096/1‑142 (MQ=255) ccAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATccc > 1:364800/1‑149 (MQ=255) ccAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATccc > 1:4371358/1‑149 (MQ=255) cAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCa < 2:4731201/149‑1 (MQ=255) cAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCa < 2:4496627/149‑1 (MQ=255) aGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAg > 1:216395/1‑149 (MQ=255) aGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAg > 1:2609418/1‑149 (MQ=255) atatCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCt < 1:2503718/149‑1 (MQ=255) tatCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCtt > 2:3422178/1‑149 (MQ=255) tatCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCtt < 1:2588395/149‑1 (MQ=255) tatCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCtt < 1:1303515/149‑1 (MQ=255) atCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCCTGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCttt < 2:2300853/149‑1 (MQ=255) cGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCACAGCTTTTg > 1:3879765/1‑149 (MQ=255) gCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTgg < 2:247132/149‑1 (MQ=255) ccTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGt < 1:1627608/149‑1 (MQ=255) cTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGtt > 1:4713283/1‑149 (MQ=255) cTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGtt < 2:1446817/149‑1 (MQ=255) ttCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTa > 2:3887731/1‑149 (MQ=255) ttCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTa > 2:1739668/1‑149 (MQ=255) tCTGTCAGCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGTCCCGACCATCTCGATAAATTCGCCATCCGCCTCATAATGGGTCATCTGTTTAATGACCTGGGTTTTTCCATCCCAGCTTTTGGTTAc < 2:3139228/149‑1 (MQ=255) tCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGcc < 2:2563821/149‑1 (MQ=255) aCCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTg < 1:3944942/149‑1 (MQ=255) aCCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTg > 1:1467488/1‑149 (MQ=255) cccGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCGTTTGGTTACTGCCTGt > 1:370332/1‑149 (MQ=255) cGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTaa < 1:1139347/149‑1 (MQ=255) gCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAAt < 2:1146062/149‑1 (MQ=255) gCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAAt < 1:50067/149‑1 (MQ=255) cTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAAtt < 1:2485521/149‑1 (MQ=255) cAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCa < 1:1399339/149‑1 (MQ=255) aGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAg > 2:2950981/1‑149 (MQ=255) gCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCatt > 1:2859405/1‑147 (MQ=255) ccGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTcc < 2:2569520/149‑1 (MQ=255) ccGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTcc < 2:4365106/149‑1 (MQ=255) ccGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTcc < 1:211695/149‑1 (MQ=255) ggCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTg > 1:3710880/1‑149 (MQ=255) aaCCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCa < 2:855762/149‑1 (MQ=255) aaCCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCa > 2:4212062/1‑149 (MQ=255) aaCCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCa > 2:1846444/1‑149 (MQ=255) ccATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATc < 2:2411072/149‑1 (MQ=255) cATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCt > 1:3675471/1‑149 (MQ=255) aTGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCtt > 1:1040846/1‑149 (MQ=255) aTGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCtt < 2:165337/149‑1 (MQ=255) tGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTa > 2:1129461/1‑149 (MQ=255) cagcagCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTtc < 2:1317826/149‑1 (MQ=255) gcagcGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATTACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTtctc > 2:2726839/1‑149 (MQ=255) agcGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCAc < 2:110678/149‑1 (MQ=255) cGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTa < 1:1792022/149‑1 (MQ=255) gTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTAt < 2:1077825/149‑1 (MQ=255) tCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATc < 2:1747030/149‑1 (MQ=255) cGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCg < 2:4575054/149‑1 (MQ=255) tCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATATTATTACTCACTATCGACCAg > 1:3260869/1‑149 (MQ=255) gCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCcg > 1:2501065/1‑149 (MQ=255) gCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCcg > 2:2531856/1‑149 (MQ=255) ccAGACGGCCCGACCATCACGATAAAGTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCa < 1:1997686/149‑1 (MQ=255) gCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGc > 1:2049780/1‑149 (MQ=255) ccGACCATCACGATAAATTCGCCATCCGCCACATCACGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCAc < 1:548211/149‑1 (MQ=255) cATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGc < 2:3681947/149‑1 (MQ=255) cATCACGATAAATTCGCCATCCGCAACAACAAGGGTCAGCGGTATAATTACCTGGTTTTTACCATCCCTGCTTTTGGTAACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGAACGAAGGCACTCTGc > 1:1371939/1‑149 (MQ=255) aTCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCa > 2:1558233/1‑149 (MQ=255) aTCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCa > 1:31047/1‑149 (MQ=255) cACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATc < 1:483400/149‑1 (MQ=255) cACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATc < 2:517284/149‑1 (MQ=255) aTAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGACACGCTGCATCACTa > 2:2988594/1‑149 (MQ=255) tAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATTACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTaa < 2:4154073/149‑1 (MQ=255) aTTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAAc > 1:1550428/1‑149 (MQ=255) ttCGCCATCCGCCACCTCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACa < 2:4783181/149‑1 (MQ=255) gCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATc < 2:3927614/149‑1 (MQ=255) ccATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATca > 1:2280082/1‑149 (MQ=255) aTCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATcacc < 1:1079214/149‑1 (MQ=255) tCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATcacca > 2:1057422/1‑149 (MQ=255) ccGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATcaccac < 2:2804192/149‑1 (MQ=255) ccGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATcaccac < 1:4190051/149‑1 (MQ=255) cacaTCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCggc > 2:2730656/1‑148 (MQ=255) cacaTCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGa > 2:338752/1‑149 (MQ=255) acaTCAAGGGTCAGCGGTTTAATTACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAg > 1:3526375/1‑149 (MQ=255) cAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGAt < 1:4059902/149‑1 (MQ=255) aaGGGTCAGCGGTTTAATTACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATa > 1:405305/1‑149 (MQ=255) aGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATaa > 2:684752/1‑149 (MQ=255) aGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATaa > 2:4338550/1‑149 (MQ=255) gggTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAg < 1:4360749/149‑1 (MQ=255) tCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGt < 1:1419493/149‑1 (MQ=255) gCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGGTAAGCGTTaa > 1:2361312/1‑149 (MQ=255) tAATTACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACAt < 2:2773466/149‑1 (MQ=255) tAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGCCCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACAt < 2:330067/149‑1 (MQ=255) tAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACAt > 2:3820766/1‑149 (MQ=255) tAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACAt < 1:1641848/149‑1 (MQ=255) aTGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCg > 2:3540018/1‑149 (MQ=255) gACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGcc > 2:2024540/1‑149 (MQ=255) | TCACGCGCTGGTCGTTGATCCAGATATCGCCTTCTGTCACCCGCTCCAGCCCGGCAACCATGCGCAGCAGCGTCGATTTCCCGCAGCCAGACGGCCCGACCATCACGATAAATTCGCCATCCGCCACATCAAGGGTCAGCGGTTTAATGACCTGGGTTTTACCATCCCAGCTTTTGGTTACTGCCTGTAATTTCAGTCCTGCCATCTTATTTCTCACTATCGACCAGGCCGCGCACGAAGGCACGCTGCATCACTAAAACAATCACCACCGGAGGGATAAGCGTTAACAACATCGCC > CP009273/3582336‑3582632 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |