| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,597,160 | T→G | 20.0% | E148D (GAA→GAC) | ftsY ← | Signal Recognition Particle (SRP) receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,597,160 | 0 | T | G | 20.0% | 554.4 / 200.2 | 325 | E148D (GAA→GAC) | ftsY | Signal Recognition Particle (SRP) receptor |
| Reads supporting (aligned to +/- strand): ref base T (115/144); new base G (29/36); total (145/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.24e-01 | |||||||||||
Only 100 of 347 total aligned reads displayed.
CGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGCGTTTCTT > CP009273/3597013‑3597308 | cgcgAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATttctt < 1:1229387/149‑1 (MQ=255)cgcgAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATttctt < 1:1183967/149‑1 (MQ=255) gcgAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATttcgtc < 1:777580/149‑1 (MQ=255) cgAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTtcgtct < 1:2639958/149‑1 (MQ=255) aaaaaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTa > 1:4293539/1‑149 (MQ=255) aaaaaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTa > 2:2987358/1‑149 (MQ=255) aaaaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAg > 2:2398014/1‑149 (MQ=255) aaaaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAg < 1:4262894/149‑1 (MQ=255) aaaaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTACAGCTCTTCGTCGGTAATTTAGTCttttt > 1:4023858/1‑147 (MQ=255) aaaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGc < 1:3614619/149‑1 (MQ=255) aaCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATATCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGcc > 2:4641711/1‑149 (MQ=255) aCCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCg > 2:3808861/1‑149 (MQ=255) cttcttTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGct < 1:4230119/149‑1 (MQ=255) cttcttTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACAGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGct < 1:2476938/149‑1 (MQ=255) ttcttTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGctt < 1:3667055/149‑1 (MQ=255) cttTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGcttct < 2:1522012/149‑1 (MQ=255) tttGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGcttcnt < 2:560543/149‑1 (MQ=255) gTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGTAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCttcttcttc < 2:4725491/149‑1 (MQ=255) gTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCttcttcttc < 1:4713945/149‑1 (MQ=255) tCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTcc < 1:1495199/149‑1 (MQ=255) tCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTcc > 2:574643/1‑149 (MQ=255) tCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTcc < 1:2348170/149‑1 (MQ=255) cGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTccg > 1:1546844/1‑149 (MQ=255) gTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTccgcc > 2:2131395/1‑149 (MQ=255) gTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTccgcc < 2:950481/149‑1 (MQ=255) tttttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGACCCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTccgccg > 2:650755/1‑149 (MQ=255) tttttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCCGCGCCGTGTCCAGCTCGTCGGCGGGAATTTCTTCTTTATCCCCGTCTTCTTccgccg > 1:857692/1‑149 (MQ=255) ttttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCcgccgc < 1:3421031/149‑1 (MQ=255) ttttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCcgccgc < 1:2754708/149‑1 (MQ=255) ttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCtt < 2:1375783/149‑1 (MQ=255) ttCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCtt < 2:1308262/149‑1 (MQ=255) tCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTc < 2:1132462/149‑1 (MQ=255) cTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGa < 2:436571/149‑1 (MQ=255) tGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTGTCCAGCTCTTCGTCGGTACTTTGTTCTTTAGCCGCGTCTTCTTCCGCCGCGGCGAc > 1:4056037/1‑149 (MQ=255) cTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACaa < 1:3892158/149‑1 (MQ=255) tCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTACCGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCGTCTTCTTCCGCCGCGTCGACact > 1:3007884/1‑147 (MQ=255) ccTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAAtc < 2:2892355/149‑1 (MQ=255) ccTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAAtc > 2:3205035/1‑149 (MQ=255) gAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATctct > 2:4289732/1‑149 (MQ=255) gCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCGTCTTCTTCCGCCGCTTCGACAATCTCTAc > 2:3694641/1‑149 (MQ=255) aTTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGt > 2:4535386/1‑149 (MQ=255) tttCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGtt > 2:3471000/1‑149 (MQ=255) ttcttcCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGttt < 1:3152435/149‑1 (MQ=255) cttcCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTcc < 2:342362/149‑1 (MQ=255) ccGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCa < 1:3324807/149‑1 (MQ=255) tcttcttctGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCGTCAGCCTGCCa > 1:4577578/1‑149 (MQ=255) ttcttctGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCAct < 1:4655085/149‑1 (MQ=255) tcttctGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCGTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTACGCCGCGTCGCCAATCTCTACGGTTTCCGCTTCAGCCTGCCCctc > 1:528211/1‑149 (MQ=255) ttctGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACtctt > 2:2667137/1‑149 (MQ=255) ctGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACtcttct < 2:1455379/149‑1 (MQ=255) ctGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACtcttct < 1:2560565/149‑1 (MQ=255) ccGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGc < 1:196806/149‑1 (MQ=255) cGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCg > 2:1721965/1‑149 (MQ=255) aggaACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGaaa < 1:2575092/149‑1 (MQ=255) ggaACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAAc < 2:4041065/149‑1 (MQ=255) ggaACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAAc < 1:4137351/149‑1 (MQ=255) ggaACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTATTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACGCTTCTGGCGAAAc > 1:1925080/1‑149 (MQ=255) gaACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAAcc < 1:3501091/149‑1 (MQ=255) aaCCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCg > 1:4749693/1‑149 (MQ=255) ccaccaTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCt < 1:4328267/149‑1 (MQ=255) caccaTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCtt > 2:2085370/1‑149 (MQ=255) caccaTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACACTTCTGGCGAAACCGCtt > 1:128861/1‑149 (MQ=255) caccaTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCGTCGGCGGTAATTTCTTCTTTAGCCGCGTCTTCTTCCGCCGCGTCGACAAAATCAACGGTTTCCGCTTCAGCCAGCCCCAAATCTGGCGAAACCGCtt > 1:2435750/1‑149 (MQ=255) accaTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTGTCCAGCTCTTCGTCGGGAATTTCTTCTTTATCCGCTTCTTCTTACGCCGCTTCGACAAACTCTACGGTTTCCGCGTCAGCCAGCCACACTTCTGGCGCAAccccgtc > 1:4413622/1‑144 (MQ=255) caTCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCgg < 1:2061651/149‑1 (MQ=255) aCCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGtt < 2:4161283/149‑1 (MQ=255) aCCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGtt > 1:3930689/1‑149 (MQ=255) ccGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTg > 2:2509807/1‑149 (MQ=255) gCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGAc < 2:2185723/149‑1 (MQ=255) ctctTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTATCCGCTTCTTCTTACGCCGCGTCGACAATATCTAAGGTTTCCGCTTCAGCCTGCCACACTTCTGGCGAAACCGCTTCGGCGTTGACGt > 1:2701164/1‑149 (MQ=255) tcttctGCCGCTTCGGCAGCCAGCGCCGTTTCCCGCGCGTCGGCGGGCATTTCTTCTTTAGCCGCGTCTTCGGCCGCCCCGTCGACACACTCAACGGTTTCCGCGTCAGCCTGCCCCTCGTCGGGCGAAACCGCGTCGGCGGTGACggc > 1:2139331/1‑147 (MQ=255) cttctGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCt < 2:1051434/149‑1 (MQ=255) cttctGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCt < 2:1927810/149‑1 (MQ=255) ttctGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTGTTTAGCCGCTTCTTCTTACGCCCCATCGACAATATCTACGGTTTCCGCGTCAGCCTGCCACTCTTCTGGCGAAACCGCTTAGGCGGTGACGTCtt > 1:2874974/1‑149 (MQ=255) ctGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTcc < 1:2247729/149‑1 (MQ=255) ccGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGc < 1:295238/149‑1 (MQ=255) cTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACCATCTCTACGGTTTACGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGTCGTCTTCCGGCAAc > 1:4696709/1‑149 (MQ=255) cTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAAc < 1:3243212/149‑1 (MQ=255) ttCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTACGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCATCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACg > 2:2801198/1‑149 (MQ=255) tCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACgg < 1:591566/149‑1 (MQ=255) ggCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCa < 1:180/149‑1 (MQ=255) cGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGtt < 2:3755588/149‑1 (MQ=255) tttCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCg > 1:135474/1‑149 (MQ=255) tCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGAt < 2:3931083/149‑1 (MQ=255) ccAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATa > 1:879896/1‑149 (MQ=255) aGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGc > 2:2603933/1‑149 (MQ=255) aGCTCTTCGTCGGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGc < 1:2320557/149‑1 (MQ=255) gCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGcc < 2:3494046/149‑1 (MQ=255) tctTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCAc < 2:799590/149‑1 (MQ=255) tctTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCAc < 2:859547/149‑1 (MQ=255) ctTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACt < 2:1965922/149‑1 (MQ=255) ttCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTg < 2:1000236/149‑1 (MQ=255) tcgtcgGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTgg < 2:161456/149‑1 (MQ=255) tcgGTAATTTCGTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTc > 1:3397494/1‑149 (MQ=255) gTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCgg > 2:1252046/1‑149 (MQ=255) tAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGc > 1:3169795/1‑149 (MQ=255) aaTTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGTCGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGCg > 2:2325921/1‑149 (MQ=255) tttCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGCGtt > 1:3744700/1‑149 (MQ=255) ttcttcTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGCGttt > 1:674805/1‑149 (MQ=255) ttcttcTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGCGttt > 1:3491114/1‑149 (MQ=255) | CGCGAAAAAACCTTCTTTGGTCGGTTTTTCCTGCTCCTGAGCGATTTCTTCCACCGGCTGCTCTTCTTCTGCCGGAGGAACCACCATCACCGCCTCTTCTGCCGCTTCGGCAGCCAGCGCCGTTTCCAGCTCTTCGTCGGTAATTTCTTCTTTAGCCGCTTCTTCTTCCGCCGCTTCGACAATCTCTACGGTTTCCGCTTCAGCCTGCCACTCTTCTGGCGAAACCGCTTCGGCGTTGACGTCTTCCGGCAACGGCAGCTCTTCACGTTCGATAGCCACTGGCTCCGGCGTTTCTT > CP009273/3597013‑3597308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |