| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,611,392 | C→A | 16.3% | A86E (GCG→GAG) | nikE → | nickel transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,611,392 | 0 | C | A | 16.3% | 924.1 / 109.6 | 305 | A86E (GCG→GAG) | nikE | nickel transporter subunit |
| Reads supporting (aligned to +/- strand): ref base C (134/121); new base A (26/24); total (160/145) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 307 total aligned reads displayed.
AGCGGCGAAACCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCAGCGAAATGCTG > CP009273/3611244‑3611540 | gcggcgAAACCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCg < 2:1044036/149‑1 (MQ=255) gAAACCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTccg > 2:4242673/1‑149 (MQ=255) aaCCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTccgcc > 2:2811867/1‑149 (MQ=255) ccGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCAGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGAGGCGAACCGCTCGCGAAACTCAATCGCGCCCAGCGAAAAGCGTTCcgccgc > 1:4288993/1‑149 (MQ=255) tCGCCCTGCTGGGGCGCAGCGGCTGCGGGAATAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGat < 2:161913/149‑1 (MQ=255) tCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGat > 1:4176365/1‑149 (MQ=255) tCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGGTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGat < 1:2862835/149‑1 (MQ=255) cccTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATAtt > 1:2926289/1‑149 (MQ=255) ctgctgGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGCATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCa > 2:2439994/1‑149 (MQ=255) tgctgGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAg > 2:1939516/1‑149 (MQ=255) gctgGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGa < 1:475540/149‑1 (MQ=255) ctgGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGAt < 2:1573328/149‑1 (MQ=255) tgGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATg < 1:1353548/149‑1 (MQ=255) ggggCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATgg < 1:719620/149‑1 (MQ=255) gcgcAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTAt < 1:1983156/149‑1 (MQ=255) gcgcAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTAt < 1:585372/149‑1 (MQ=255) cgcAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTAtt < 2:4361598/149‑1 (MQ=255) cgcAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTAtt < 1:504215/149‑1 (MQ=255) gcAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTAttt < 1:982891/149‑1 (MQ=255) cAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTc < 1:1933678/149‑1 (MQ=255) aGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCa > 2:184420/1‑149 (MQ=255) aGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCa < 2:4713041/149‑1 (MQ=255) ggCTGCGGGAAAAGTACCCTCGCGCGGGTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGa < 1:1598769/149‑1 (MQ=255) tGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTc < 1:668761/149‑1 (MQ=255) tGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTc > 1:1157070/1‑149 (MQ=255) cGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCa < 2:1829204/149‑1 (MQ=255) aaaGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGTTATTTCAGGACTCCATCAgc > 2:3826087/1‑149 (MQ=255) aaaGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAgc > 1:2406992/1‑149 (MQ=255) aGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAgcgc < 1:1728178/149‑1 (MQ=255) aGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAgcgc < 2:1278753/149‑1 (MQ=255) aGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAgcgc > 1:4257577/1‑149 (MQ=255) aGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATGAGCTGGCGTGGCGAACCGCTGGCGAACCTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAgcgc < 2:2611998/149‑1 (MQ=255) gTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGcc < 1:1174650/149‑1 (MQ=255) gTACCCTCGCGCGGGTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGcc < 1:15623/149‑1 (MQ=255) ccTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGa > 1:366486/1‑149 (MQ=255) cTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGaa < 2:541854/149‑1 (MQ=255) tCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAAt > 1:4097392/1‑149 (MQ=255) cgcgcgGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCACTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATc < 1:3158636/149‑1 (MQ=255) ggTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCgcgc > 2:4762660/1‑149 (MQ=255) tGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCaaa > 1:2246443/1‑149 (MQ=255) cTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAAc < 2:398305/149‑1 (MQ=255) ggtggGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCg > 1:3585059/1‑149 (MQ=255) tggGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTg > 2:3001372/1‑149 (MQ=255) tggGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTg > 2:3885106/1‑149 (MQ=255) gggTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTgc > 1:3522679/1‑149 (MQ=255) ggTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCACAACCGTgcg > 2:1809517/1‑149 (MQ=255) ggTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTgcg > 1:4394/1‑149 (MQ=255) gTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTgcgc > 1:2126116/1‑149 (MQ=255) aGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCgaga > 1:4012332/1‑149 (MQ=255) gAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGAt > 1:4554187/1‑149 (MQ=255) tCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCt < 2:3574368/149‑1 (MQ=255) tCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCt < 1:625706/149‑1 (MQ=255) gcGCCCGCGCAGGGGACGATGAGCTGGCGTGGCGCACCGCTGGCGACACTCACTCGCGCCCAGCGTAAAGCGTTCCGCCGCGAAATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCt < 2:4407255/148‑1 (MQ=255) cGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTg < 2:2904888/149‑1 (MQ=255) gCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGc > 2:3959122/1‑149 (MQ=255) gCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGc > 2:3255991/1‑149 (MQ=255) ccGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGt > 1:2536271/1‑149 (MQ=255) ccGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGt < 2:1872188/149‑1 (MQ=255) gcgcAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGa > 2:448567/1‑149 (MQ=255) gcAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAAc < 1:605009/149‑1 (MQ=255) cAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAccc > 2:2348659/1‑149 (MQ=255) gggAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGAt < 1:3905817/149‑1 (MQ=255) gggAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGAt < 1:2447825/149‑1 (MQ=255) gggAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGAt < 1:2785610/149‑1 (MQ=255) atatTAGCTGGCGTGGCGAACCGCTGGCGAAGCTCAATCGCGCCAAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCAATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGCGATCCTGCGGGAACCGATgcgc > 2:2051173/1‑149 (MQ=255) atatTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATgcgc > 1:1066174/1‑149 (MQ=255) atatTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATgcgc < 2:2974097/149‑1 (MQ=255) tatTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGcc > 2:1113003/1‑149 (MQ=255) ttAGCTGGCGTGGCGAACCGCTGGCGAAACTCACTCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAACCCGTGCGCGAGATCCTGCGTGAACCGATGCGCCAc < 2:3257193/149‑1 (MQ=255) ttAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCAc > 2:3093050/1‑149 (MQ=255) ttAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCAc < 2:3356156/149‑1 (MQ=255) aGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCt > 2:670161/1‑149 (MQ=255) aGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCt > 2:2708193/1‑149 (MQ=255) cTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGc < 1:3089157/149‑1 (MQ=255) cTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGc < 2:1668683/149‑1 (MQ=255) tggcgtggcgAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCt > 1:2642753/1‑149 (MQ=255) gtggcgAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCa < 2:458491/149‑1 (MQ=255) tggcgAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTCTCAc > 2:890954/1‑149 (MQ=255) aaCCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGaaa > 1:448162/1‑149 (MQ=255) aaCCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGaca > 1:2047670/1‑147 (MQ=255) cGCTGGCGAAACCCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGaaaaaa > 1:471279/1‑149 (MQ=255) ggCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCg > 1:1827296/1‑149 (MQ=255) gCGAAACTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGa > 1:1526679/1‑149 (MQ=255) gAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGacc > 1:3232608/1‑147 (MQ=255) aaaCTCAATCGCGCCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGaaca > 1:2675327/1‑149 (MQ=255) aCTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGaacaac < 1:382172/149‑1 (MQ=255) tCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTg < 1:4656722/149‑1 (MQ=255) aaTCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGgc < 2:214064/149‑1 (MQ=255) tCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGgcgc < 1:795014/149‑1 (MQ=255) cgcgCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGgcgcg > 2:3505990/1‑149 (MQ=255) gcgcCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGgcgcgc < 2:4309900/149‑1 (MQ=255) gcgcCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGgcgcgc < 2:3704348/149‑1 (MQ=255) gcCCAGCGTAAAGAGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGgcgcgcgc > 1:3769972/1‑149 (MQ=255) cccAGCGTAAAGCGTTCCGCCGCGTTATTCAGATTGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCTCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGcc < 2:4288993/149‑1 (MQ=255) cccAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGcc < 1:12547/149‑1 (MQ=255) cccAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGcc < 1:169829/149‑1 (MQ=255) cccAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGcc < 2:1157070/149‑1 (MQ=255) ccAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCa < 1:3008282/149‑1 (MQ=255) cAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCAg > 1:1366250/1‑149 (MQ=255) gCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCAGCg < 2:3189529/149‑1 (MQ=255) | AGCGGCGAAACCGTCGCCCTGCTGGGGCGCAGCGGCTGCGGGAAAAGTACCCTCGCGCGGTTGCTGGTGGGTTTAGAATCGCCCGCGCAGGGGAATATTAGCTGGCGTGGCGAACCGCTGGCGAAACTCAATCGCGCCCAGCGTAAAGCGTTCCGCCGCGATATTCAGATGGTATTTCAGGACTCCATCAGCGCCGTGAATCCGCGCAAAACCGTGCGCGAGATCCTGCGTGAACCGATGCGCCACCTGCTATCACTGAAAAAATCCGAACAACTGGCGCGCGCCAGCGAAATGCTG > CP009273/3611244‑3611540 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |