| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,661,610 | A→T | 88.5% | F313L (TTT→TTA) | yhjA ← | putative cytochrome C peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,661,610 | 0 | A | T | 88.5% | 931.7 / 91.4 | 304 | F313L (TTT→TTA) | yhjA | putative cytochrome C peroxidase |
| Reads supporting (aligned to +/- strand): ref base A (18/17); new base T (137/132); total (155/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 308 total aligned reads displayed.
GTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGTTCAACGGCG > CP009273/3661462‑3661758 | ccgccgAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCtaa < 1:861582/149‑1 (MQ=255) cgccgAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAAt < 2:367478/149‑1 (MQ=255) cgAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCa > 1:3469695/1‑149 (MQ=255) ataataCCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAAt > 1:648474/1‑149 (MQ=255) ataataCCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAAt > 1:1439282/1‑149 (MQ=255) ataataCCACCATGACAAGTTGCACAGTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAAt > 1:1056816/1‑149 (MQ=255) accaccATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCAt < 1:4649950/149‑1 (MQ=255) ccaccaTGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATGTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATc > 2:3964745/1‑149 (MQ=255) caccaTGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCa > 2:1683795/1‑149 (MQ=255) caccaTGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCa > 2:1222084/1‑149 (MQ=255) ccaTGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGt > 1:2891628/1‑149 (MQ=255) tGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAat < 2:1159880/149‑1 (MQ=255) tGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGTAat < 1:2861186/149‑1 (MQ=255) aGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATAtttt > 1:12249/1‑149 (MQ=255) gTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTc > 1:1875079/1‑149 (MQ=255) gCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGcc < 1:1483750/149‑1 (MQ=255) acaTTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCAc > 1:3525762/1‑149 (MQ=255) acaTTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCAc > 1:1136782/1‑149 (MQ=255) acaTTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTAAGCAATGGCATCAGTAATATTTTCGCCAc > 2:3511023/1‑149 (MQ=255) tttATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGa > 2:882157/1‑149 (MQ=255) tttATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGa > 2:4693214/1‑149 (MQ=255) tatCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCt < 2:1940651/149‑1 (MQ=255) atCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCtt > 2:4447491/1‑149 (MQ=255) cTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGc < 1:3964687/149‑1 (MQ=255) cTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGc < 1:1576067/149‑1 (MQ=255) cTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGc > 2:765467/1‑149 (MQ=255) cTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGc > 2:4027712/1‑149 (MQ=255) ttAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCTCCACTGAAACCTTGCgg > 2:4604605/1‑149 (MQ=255) ttAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCgg > 2:266203/1‑149 (MQ=255) aaaTAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGAt < 2:1526609/149‑1 (MQ=255) aataatTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATa < 2:2519052/149‑1 (MQ=255) ataatTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAg < 2:1841508/149‑1 (MQ=255) taatTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGACTCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGa > 2:2091742/1‑149 (MQ=255) taatTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGa < 1:3744144/149‑1 (MQ=255) aatTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGAc > 1:91224/1‑149 (MQ=255) aatTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGAc > 1:4167815/1‑149 (MQ=255) atTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACt < 1:3111595/149‑1 (MQ=255) atTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACt > 2:2744943/1‑149 (MQ=255) ttGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACtt > 1:1111307/1‑149 (MQ=255) gATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCg > 1:2360733/1‑149 (MQ=255) tAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAg < 1:249934/149‑1 (MQ=255) tAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAg < 2:3882334/149‑1 (MQ=255) gCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGa > 2:93734/1‑149 (MQ=255) gCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGa > 2:1323632/1‑149 (MQ=255) ccTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGaa < 1:304793/149‑1 (MQ=255) cTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAAc > 1:59825/1‑149 (MQ=255) cTTTTTTCTGGTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAAc < 1:3619631/149‑1 (MQ=255) tttCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCg > 2:1999157/1‑149 (MQ=255) tttCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCg > 1:1957686/1‑149 (MQ=255) ttCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGt > 2:2406/1‑149 (MQ=255) cTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGttt < 1:32554/149‑1 (MQ=255) gTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTa > 2:48969/1‑149 (MQ=255) ttGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTaa > 2:4526670/1‑149 (MQ=255) ttGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTaa < 2:2614939/149‑1 (MQ=255) ggcgcCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTACTGTTTTCTCTACTTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAg < 2:3718128/148‑1 (MQ=255) gcgcCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGc > 2:1616011/1‑149 (MQ=255) gcgcCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGc > 2:1793951/1‑149 (MQ=255) cGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCg < 1:2687515/149‑1 (MQ=255) tCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGa > 2:864858/1‑149 (MQ=255) cAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGAt < 2:2940033/149‑1 (MQ=255) aGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATc > 1:1303500/1‑149 (MQ=255) gcgcATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCt > 2:4370678/1‑149 (MQ=255) cgcATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCtt < 2:685339/149‑1 (MQ=255) cATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCtttt < 2:125735/149‑1 (MQ=255) tttCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTcc < 2:4740643/149‑1 (MQ=255) cATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGc < 1:4480138/149‑1 (MQ=255) aTCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCt < 2:234543/149‑1 (MQ=255) aTCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCt < 2:2946231/149‑1 (MQ=255) tctcCGCGCAACCATTTATCACATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCCGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTGTCCAGCtt < 2:3429272/149‑1 (MQ=255) ctcCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTa < 2:2948224/149‑1 (MQ=255) tcCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAg < 1:2180017/149‑1 (MQ=255) tcCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAg < 1:4384058/149‑1 (MQ=255) ccGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGc > 1:1355557/1‑149 (MQ=255) gcAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCaata < 1:3156040/149‑1 (MQ=255) aTTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCg > 2:2216574/1‑149 (MQ=255) tttATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGt > 2:4121551/1‑149 (MQ=255) aTCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTccc < 1:345612/149‑1 (MQ=255) aaTGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGa > 1:1842135/1‑149 (MQ=255) aaTGGGGAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGa > 2:3016228/1‑149 (MQ=255) aTGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGTAATATTCTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGAt > 1:3847701/1‑149 (MQ=255) ggggAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGAttt < 2:504140/149‑1 (MQ=255) gggAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTc > 1:4727814/1‑149 (MQ=255) gAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGa < 1:2700646/149‑1 (MQ=255) gAATCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGa < 1:259433/149‑1 (MQ=255) aaTCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGAc > 2:4745536/1‑149 (MQ=255) aTCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACg > 1:4605303/1‑149 (MQ=255) aTCCGGCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACg > 1:2112272/1‑149 (MQ=255) gCGTACTTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCAtt < 2:1056816/149‑1 (MQ=255) gCGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCAtt > 1:1721348/1‑149 (MQ=255) cGTAATTAATGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCAttt < 2:3798691/149‑1 (MQ=255) aattaatGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCaa < 1:507306/149‑1 (MQ=255) attaatGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAAt > 1:2679987/1‑149 (MQ=255) attaatGTTTTCTCAAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAAt > 2:1038648/1‑149 (MQ=255) tGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCGCAGGATTTGGACGCCTGTTCGATCGGGt > 2:3297460/1‑149 (MQ=255) tGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGt < 1:1658375/149‑1 (MQ=255) tGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGt < 1:2772377/149‑1 (MQ=255) tGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGt > 2:3550666/1‑149 (MQ=255) tGTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGt < 2:2116599/149‑1 (MQ=255) gTTTTCTCTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGtt < 2:1875079/149‑1 (MQ=255) tctcTAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGTTCAAc < 1:739952/149‑1 (MQ=255) | GTCCGCCGAGAATAATACCACCATGACAAGTTGCACATTTATTATCTTTAAATAATTGATAGCCTTTTTTCTGTTGCGCCGTCAGCGCATTTTCATCTCCGCGCAACCATTTATCAAATGGGGAATCCGGCGTAATTAATGTTTTCTCAAATTCAGCAATGGCATCAGTAATATTTTCGCCACTGAAACCTTGCGGATAGACTTCGAGGAACTGCGTTTTAAGCTGCGGATCTTTTTCCAGCTTAGCAATAATTTCGTCCCAGGATTTCGACGCCATTTCAATCGGGTTCAACGGCG > CP009273/3661462‑3661758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |