| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,786,682 | C→A | 5.3% | C121F (TGT→TTT) | yibB ← | YibB family protein, function unknown |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,786,682 | 0 | C | A | 5.3% | 912.4 / 2.2 | 293 | C121F (TGT→TTT) | yibB | YibB family protein, function unknown |
| Reads supporting (aligned to +/- strand): ref base C (153/111); new base A (7/22); total (160/133) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.51e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 299 total aligned reads displayed.
CTTACTTTCATCAAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATCGATAACGATAACCGT > CP009273/3786534‑3786830 | cTTACTTTCATCAAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTAc < 2:3694580/149‑1 (MQ=255) ttACTTTCATCAAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACa > 2:1961103/1‑149 (MQ=255) ttACTTTCATCAAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACa < 2:1316077/149‑1 (MQ=255) ttCATCAAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTAACTAAGCCCATGTTTTTAGCGTTATTTACAAAATAGGCCGTAATGTTACaaaaca > 1:425347/1‑144 (MQ=255) catcaAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCaaa > 1:4164588/1‑149 (MQ=255) aaaTGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGTTTACATACCAAAACAt > 2:3505948/1‑149 (MQ=255) aaaTGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACAt < 2:4363608/149‑1 (MQ=255) aTGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACAAAAACATAc > 1:1050804/1‑149 (MQ=255) tGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGAAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAATCCCATGTTGATAGCTTTATTTACAAAAAAGGCCTTAAGGTTAAATACCAAAACATAct > 2:1916041/1‑149 (MQ=255) gggAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATActc < 1:2850452/149‑1 (MQ=255) gggAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATActc < 2:66752/149‑1 (MQ=255) gAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAAAAGGCCATAAGGTTACATACCAAAACATAATCTg > 1:899685/1‑149 (MQ=255) aTCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTg > 2:2332915/1‑149 (MQ=255) tCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACCAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGa > 1:3719332/1‑149 (MQ=255) cccAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGAc > 1:1186922/1‑149 (MQ=255) cccAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGAc > 1:3575319/1‑149 (MQ=255) aaTTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGt < 2:1166612/149‑1 (MQ=255) ttttCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTAc < 1:4383320/149‑1 (MQ=255) ttttCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTAc < 2:4545594/149‑1 (MQ=255) ttttCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAAAAGGCCTTAATGTTACATACCAAAACAAACTCTGGTGACCAGTAc > 1:2040789/1‑149 (MQ=255) ttCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTActc > 1:712165/1‑149 (MQ=255) ttCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTActc > 1:712083/1‑149 (MQ=255) ttCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTActc < 1:3855132/149‑1 (MQ=255) tCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTActct < 2:405394/149‑1 (MQ=255) tCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTActct < 2:2863114/149‑1 (MQ=255) tCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTActct < 2:1271706/149‑1 (MQ=255) tCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCAATAATCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACAAATACATACTCTGGTGACCAGTActct > 2:4722745/1‑149 (MQ=255) aaTCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTgg > 1:1296804/1‑149 (MQ=255) aaTCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTgg < 2:1198039/149‑1 (MQ=255) ccTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGtt > 2:3851887/1‑149 (MQ=255) cTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGttt < 1:4629178/149‑1 (MQ=255) cTCGAGGTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGttt < 1:1486241/149‑1 (MQ=255) tCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGtttt < 2:4481645/149‑1 (MQ=255) cGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGttttt < 2:1937948/149‑1 (MQ=255) gAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATTCCAAAACATACTCTGGTGAACAGTACTCTGGGtttttt > 1:1531945/1‑149 (MQ=255) tACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAAtt > 2:1351536/1‑149 (MQ=255) aTTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTc > 1:4576502/1‑149 (MQ=255) tGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAg > 2:1785350/1‑149 (MQ=255) cTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCt > 1:1931643/1‑149 (MQ=255) aTGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTAAATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTTTCGAGGCTCaa > 1:1031905/1‑149 (MQ=255) aTGGCAATAGCCAAAATCTATCCACACAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCaa > 1:972022/1‑149 (MQ=255) aaTAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTa < 2:3003614/149‑1 (MQ=255) tAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTAtt < 2:4129963/149‑1 (MQ=255) gaGCCAAAATCTATCCACTCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTAtt < 2:3288142/148‑1 (MQ=255) aaaaTCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTaa > 1:3005799/1‑149 (MQ=255) aaTCTATCCACGCAACAAGAGGCGTTTTGAAAAAGCCCATGTTGATAGCTTTTTTTACAAAATATGGCTTAAGGTTACATAACAAAAAAAAATCTGGTGTCCAGTACTCTGGGTTTTTTTATTTTCGTGGGTCAAGTGTATTTTTTAAc > 1:428684/1‑149 (MQ=255) tCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCa > 2:4784302/1‑149 (MQ=255) cACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATc > 2:605090/1‑149 (MQ=255) cACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATc > 2:711876/1‑149 (MQ=255) aCGCAACAAGAGGCGTTTTCACAAAGCCCATGTTGATAGCTTTATTTAAAAAATAGGCCTTAATGTTACAAACCAAAACATACTCAGGTGACCCGTAAGCGGGGGTTTTTTATTTTGGGGGCGCAAGTCTATTTGTAAACGACTCAGCt > 1:2437571/1‑149 (MQ=255) gCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTTTCGAGGCTCAAGTCTATTTGTAAACGACTCATCttt > 2:2470050/1‑149 (MQ=255) aacaaGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCttttt > 2:216535/1‑149 (MQ=255) caaGAGGCGTTTTCAATAAGCCCATGTTGATAGCTTTATTTACAAAATACGCCTTAAGGTTACAAAACAAAACATAAAATTGTTACCAGTAATCTGGGTATTTTAATTGTCGCGGCTCAAGTCGAATAGTAAACTACTCAAAGTTTTGa > 2:2220452/1‑149 (MQ=255) agGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACACTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAAttt > 1:394132/1‑149 (MQ=255) ggCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAAtttt > 2:4611446/1‑149 (MQ=255) cGTTTTCACTACCCCCTTGTTGTTAGCTTTATTTACAAATTTGGCCTTATGGTTACATACCAAAACATCCTCGGGGGACCCGTCCTCTGGGTTTTTTATTGGGCGTGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAAtttttt < 1:3496318/149‑1 (MQ=255) gTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGCCTATTTGTAAACGACGCATCTTTTTGAATTTTTTc > 1:3650501/1‑149 (MQ=255) tttCACTAAGCCCATGTTTATAGATTTATTTACAAAATAGGCATTAAGGTTACATACCAAAACATACTCGGGTGACCAGTACTCTGGTTTTTTTAATTGTCGTGGCTCAAGTCTATTTGTACACGACTCATCTTTTTGAATTTTTTCGa < 2:1293085/149‑1 (MQ=255) ttCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGAt > 2:1366474/1‑149 (MQ=255) tCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATa > 1:317002/1‑149 (MQ=255) cACTAAGCCCATGTTTATAGCTTTATTTACAAAATAGGCCTTAAGGTTCCATACCAAAACATACTCTGGTTACCATTACTCTGGTTTTTTTAATTGTCGAGGATCAAGTATATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATAc < 2:1598643/149‑1 (MQ=255) cTAAGCCCATGTTGATAGCTTTTTTTAAAAAATAGGCCTTAAGTTTACATACCAAAAAATACTCTGGTGACCATTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGa < 2:2966751/149‑1 (MQ=255) cTAACCCCATTTTGATAGCTTTATTTACAAAATAGGCATAAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGTTTTTTTAATTGTCGAGGCAAAAGTCTATTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGa < 2:802045/149‑1 (MQ=255) tAAGCCCATGTTGATAGCTTTATTAAAAAAATAGGCCTTATGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGTTTTTTTAATTGTCGAGGCACACGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGAc < 2:3978873/149‑1 (MQ=255) tAAGCCATTGTTTATTGATTTATTTAAAAAATAGGCATTAAGTTTAAATACAAAAAAATAATCTGTTGACAAGTACTCTGTTTTTTTTATTTGTCTAGGATAAATTATATTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGAc < 1:666521/149‑1 (MQ=255) aGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACtt > 1:1408649/1‑149 (MQ=255) gCCCTTGTTTATATATTTATTAACAAATTTGGACTTTAGTTTAAAAACCAAACAATACTCTGGTGACCAGTACTGTGGTTTTTTTATTTGTCGTGGCACATGTTTTTTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTc < 1:1712208/149‑1 (MQ=255) gCCCATGTTTATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACAAAAAAATACTCTGGTGACCAGTACTCTGGTTTTTTTATTTGTCGAGGCACAAGTCTATTTGAAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTc < 1:1557183/149‑1 (MQ=255) cccATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCt > 1:2772240/1‑149 (MQ=255) aTGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGat > 1:3222726/1‑149 (MQ=255) tGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGata > 1:2224421/1‑149 (MQ=255) ttGATAGATTTATTAAAAAAATAGGCATTATGGTTACATACCAAAACATACTCGGGTGACCAGTACTCTGGTTTTTTTAATTGTCGAGGCTCAAGTATATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGatata < 1:2332034/149‑1 (MQ=255) tGATATCTTTATTAAAAAAATAGCCCTTATGGTTAAATACCAAAACATACTCTGGTGACACTTCCTGTGGTTTTTTTATTTGTCGCGGCTCAATTCTATTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGatatat < 1:547583/149‑1 (MQ=255) tGATAGCGTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGCGGCTCAAGTCTATTTGTAAACGACTCATCGTTTTGAATTTTTTCGATACGACTTCTGatatat > 2:3444346/1‑149 (MQ=255) taTAGATTTATAAACAAAATAGGCATTAAGTTAACATACCAAAACATACTCTGGTGACCAGTACTGGGTGTTTTTTAATTGCCGCGGCACAAGTCTATTTTAACACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATc < 2:3637119/148‑1 (MQ=255) gtttatttaAAAAATAGGCCTTATGGTTACATACCAAAACATACTCGGGTGACCAGTACTGTGGGTTTTTTATTTGTGGAGGCTAAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAAt < 2:1838163/148‑1 (MQ=255) cTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAAt > 2:187691/1‑149 (MQ=255) cTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATATGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAAt > 2:2386301/1‑149 (MQ=255) tattaaCAAAATTGGACTTATGGTTAAATACCAAAAAATACTGGGGGGACATTTACTCGGGGTTTTTTATTTGTGGCGGCTAACTTTTTTTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTc < 1:1792037/149‑1 (MQ=255) tttaCAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCtt > 2:2548343/1‑149 (MQ=255) tttaCAAAATAGGCATTAAGGTTACATCCCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCtt < 2:3911988/149‑1 (MQ=255) taCAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCtttt > 2:3610551/1‑149 (MQ=255) taCAAAATAGGCATTATGGTTAAATACAAAAAAATACTCTGGTGACCTGTACTGTGGTTTTTTTATTTGTCGAGGCTCATTTATTTTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCtttt < 1:4617643/149‑1 (MQ=255) aaaaaaaTTGGCCTTATGGTTAAATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTATTTGTCGCGGCTCATGTCTTTTTGTACACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCtttt < 1:4046898/146‑1 (MQ=255) aaaaatTAGGCCTTATGGTTACATACCAAAACATACTCTGGTGACCTGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCttttt < 2:3575319/147‑1 (MQ=255) aaaatTAGGCATTATGGTTACATACCAAAACATACTCTGGTGACCATTACTCTGGGTTTTTTAATTGTCGTGGCTCAATTCTATTTGTACACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCtttttt < 1:2727067/148‑1 (MQ=255) aaTAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTtata > 2:2074454/1‑149 (MQ=255) aTAGGCCTTATGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTATTTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTatat < 2:4262479/149‑1 (MQ=255) ttggCCTTATGTTTAAATACAAAAACTTCGTGTGGTGACCTGTCGGGGGGTTTTTTTTTTTGTGGTGGCTCACGTGTTTTTGTACACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATc < 1:448559/147‑1 (MQ=255) tAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATc > 1:781430/1‑149 (MQ=255) tAGGCATTAAGGTTAAATACAAAAACATACTCTGTTGACCATTACTGTGTTTTTTTTATTTGTCTAGGCTAAATTATATTTTAAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATc < 1:2136884/149‑1 (MQ=255) ggCATTAAGGTTAAATACCAAACCATACTCTGGTTACCAGTACTCTGGTTTTTTTATTTGTCGAGGCTAAATTATATTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcga < 1:260490/149‑1 (MQ=255) gCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCGGGTTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcgat < 2:3119248/149‑1 (MQ=255) ttAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcgataac < 2:317017/149‑1 (MQ=255) aaGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcgataacga > 2:2766757/1‑149 (MQ=255) ggTTACATACCAAAACATACTCTGGTGACCTGTACTGGGGGTTTTTTAATTGTCGCGGCTCACGTCTATTTGTACACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcgataacgata < 2:2572726/149‑1 (MQ=255) ggTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcgataacgata > 2:1053329/1‑149 (MQ=255) tttAAATACAAAAAAATACTGTGTTCACCTGTACTGTGTTTTTTTTATTTTTCGAGGATCAATTATTTTTTTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATcgataacgataa < 1:819105/148‑1 (MQ=255) ttACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATCgataacgataac > 2:2675265/1‑149 (MQ=255) cATACCAAAACTTACTCGGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATCGATAACGATAACCgt < 2:2641341/149‑1 (MQ=255) | CTTACTTTCATCAAATGGGAAATCCCAAATTTTCAATCCTCGAGTTACATTTGGCTTATGGCAATAGCCAAAATCTATCCACGCAACAAGAGGCGTTTTCACTAAGCCCATGTTGATAGCTTTATTTACAAAATAGGCCTTAAGGTTACATACCAAAACATACTCTGGTGACCAGTACTCTGGGTTTTTTAATTGTCGAGGCTCAAGTCTATTTGTAAACGACTCATCTTTTTGAATTTTTTCGATACGACTTCTGATATATCTAAATTTCTTTTTTATATCGATAACGATAACCGT > CP009273/3786534‑3786830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |