| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,796,691 | T→A | 8.6% | P269P (CCA→CCT) | waaB ← | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,796,691 | 0 | T | A | 8.6% | 927.7 / 58.9 | 291 | P269P (CCA→CCT) | waaB | UDP‑D‑galactose:(glucosyl)lipopolysaccharide‑1, 6‑D‑galactosyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (116/150); new base A (7/18); total (123/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 293 total aligned reads displayed.
ATTTATTTAGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTC > CP009273/3796543‑3796837 | tttatttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTg < 1:4366946/149‑1 (MQ=255) tttatttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTg > 2:313415/1‑149 (MQ=255) ttatttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTgg < 1:75653/149‑1 (MQ=255) ttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGaaa > 2:1979073/1‑149 (MQ=255) ttaGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTCGGaaa > 2:4369148/1‑149 (MQ=255) aagaGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCtt < 1:2307515/149‑1 (MQ=255) gagTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCa > 2:2710167/1‑149 (MQ=255) ttACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCaaaa > 2:2395789/1‑149 (MQ=255) ttACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCaaaa > 2:377547/1‑149 (MQ=255) ttACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCaaaa < 1:3391870/149‑1 (MQ=255) tACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAg < 2:1990879/149‑1 (MQ=255) aCAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGa < 1:1983946/149‑1 (MQ=255) aCCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACg > 2:4232992/1‑149 (MQ=255) gCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAg > 2:4782171/1‑149 (MQ=255) aaTATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCa > 1:2634473/1‑149 (MQ=255) atatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCaa > 2:4761852/1‑149 (MQ=255) atatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCaa > 2:660655/1‑149 (MQ=255) tatCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAAt < 2:428123/149‑1 (MQ=255) ctcCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAAc < 2:211716/149‑1 (MQ=255) tcCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCTGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACg > 2:831996/1‑149 (MQ=255) cccGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGc < 2:2439929/149‑1 (MQ=255) gTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGcactc > 1:4463714/1‑149 (MQ=255) ttGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGcactca > 2:1689360/1‑149 (MQ=255) ttGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGcactaa < 2:1240032/149‑3 (MQ=255) gATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGcactcact < 1:2845011/149‑1 (MQ=255) aTACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACtt < 2:2639855/149‑1 (MQ=255) aGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACACTCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTc < 1:4551716/149‑1 (MQ=255) aGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTc < 2:2793596/149‑1 (MQ=255) ggCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAata > 1:4091577/1‑149 (MQ=255) ggCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAata < 2:1911717/149‑1 (MQ=255) ggCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAata < 2:3530768/149‑1 (MQ=255) ccATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATc < 1:4300617/149‑1 (MQ=255) aTTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCtt < 2:3344620/149‑1 (MQ=255) ttGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTg < 2:934449/149‑1 (MQ=255) ttGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTg > 1:4167570/1‑149 (MQ=255) ttGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTg > 1:1079066/1‑149 (MQ=255) cATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTgg < 1:4427926/149‑1 (MQ=255) cATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTgg < 1:2036375/149‑1 (MQ=255) tCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGAc > 1:2942476/1‑149 (MQ=255) aataatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTccc < 1:1174637/149‑1 (MQ=255) aataatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTccc > 1:3009433/1‑149 (MQ=255) aataatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTccc < 1:2406789/149‑1 (MQ=255) ataatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCa > 2:791206/1‑149 (MQ=255) ataatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCa < 1:2508179/149‑1 (MQ=255) taatGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAg < 1:1398263/149‑1 (MQ=255) tCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGata > 1:2458002/1‑149 (MQ=255) agcagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAtt > 2:2914560/1‑149 (MQ=255) gcagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttg < 2:1161544/149‑1 (MQ=255) gcagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttg < 2:1775599/149‑1 (MQ=255) gcagGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttg > 1:3745168/1‑149 (MQ=255) ggCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATAttgttg > 1:1906264/1‑149 (MQ=255) cGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCaa < 1:492961/149‑1 (MQ=255) gagaCACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAAcc > 2:742435/1‑149 (MQ=255) gagaCACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAAcc > 2:4718543/1‑149 (MQ=255) acacAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATa < 1:1615877/149‑1 (MQ=255) cacaATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATAc < 1:305167/149‑1 (MQ=255) cacaATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATAc > 1:3460678/1‑149 (MQ=255) caATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCa < 2:2285487/149‑1 (MQ=255) aTCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGa < 2:3766170/149‑1 (MQ=255) aTCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGa > 1:4516496/1‑149 (MQ=255) tCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGAc > 2:1271152/1‑149 (MQ=255) gCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAAt > 1:3206622/1‑149 (MQ=255) gCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCAC‑TTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAAtt < 1:2396274/149‑1 (MQ=255) gCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAAt > 2:1011495/1‑149 (MQ=255) cACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAAtt > 1:1467582/1‑149 (MQ=255) cTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCg > 1:1276952/1‑149 (MQ=255) cTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCg > 1:3233385/1‑149 (MQ=255) gATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGat < 2:3863825/149‑1 (MQ=255) gATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGat > 1:658075/1‑149 (MQ=255) aCAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGatcat < 1:3904388/149‑1 (MQ=255) aGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCaa > 2:2548857/1‑149 (MQ=255) ggAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAat < 1:3961204/149‑1 (MQ=255) aTCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATAtt < 2:2362406/149‑1 (MQ=255) aTCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATAtt < 1:1596588/149‑1 (MQ=255) aTCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATAtt < 2:3926920/149‑1 (MQ=255) ccACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGTGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAAtt < 2:2595854/149‑1 (MQ=255) cACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtc > 2:710912/1‑149 (MQ=255) cACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtc < 1:2613363/149‑1 (MQ=255) cACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtc > 2:4092868/1‑149 (MQ=255) aCGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACTCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtct < 2:365749/149‑1 (MQ=255) aCGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATtct > 1:2185104/1‑149 (MQ=255) aCAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTa < 2:4521093/149‑1 (MQ=255) cAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTAc > 2:4360496/1‑149 (MQ=255) cAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTAc < 1:22761/149‑1 (MQ=255) cAAGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTAc < 1:2730025/149‑1 (MQ=255) aaGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTAcc > 1:842884/1‑149 (MQ=255) aGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCa > 2:4380393/1‑149 (MQ=255) aGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCa < 2:2965455/149‑1 (MQ=255) aGGCTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCa < 1:780788/149‑1 (MQ=255) gCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATa < 1:3694031/149‑1 (MQ=255) cTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATaa > 1:584768/1‑149 (MQ=255) cTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATaa < 1:172853/149‑1 (MQ=255) cTTCAAGTAGGGTCATAGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATaa > 1:516096/1‑149 (MQ=255) aaGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCt < 1:1030001/149‑1 (MQ=255) aGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTg < 1:2888095/149‑1 (MQ=255) aGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTg < 2:3061705/149‑1 (MQ=255) gggTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAt > 2:1390004/1‑149 (MQ=255) gggTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAt > 2:548503/1‑149 (MQ=255) ggTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCAtt < 2:4585705/149‑1 (MQ=255) cATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCT‑GACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTc < 1:2237541/149‑1 (MQ=255) | ATTTATTTAGAAGAGTTACAAAACCAGCAATATCTCCCGGTTGATACAGATGGCCATTGACATCAGGTTGAATAATGTCAGCAGGCCCGGAGACACAATCGGCACTGATACAAGGAATCCCCCACGACAAGGCTTCAAGTAGGGTCATTGGGAAACCTTCAAAAGATGACGTGAGCAATAACGCACTCACTTTTTCAATATCTTGCTGGACCAATTCCCAGGGATATTGTTGCCAACCATACCAGACAATTCGATCATCAATATTTAATTCTCTACCATAAGCCTGGCATTTTTC > CP009273/3796543‑3796837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |