| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 31,710 | C→A | 87.3% | I298I (ATC→ATA) | carB → | carbamoyl‑phosphate synthase large subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 31,710 | 0 | C | A | 87.3% | 492.3 / 69.3 | 225 | I298I (ATC→ATA) | carB | carbamoyl‑phosphate synthase large subunit |
| Reads supporting (aligned to +/- strand): ref base C (20/9); new base A (102/93); total (122/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.02e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
TCGCGCCAGCCCAAACGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCGGCCT > CP009273/31565‑31855 | tCGCGCCAGCCCAAACGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGaa > 2:3250403/1‑149 (MQ=255)tCGCGCCAGCCCAAACGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGaa > 2:4336279/1‑149 (MQ=255) gcgcCAGCCCAAACGCTGACAGACAAAGAATATCAAATCAGGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAAt < 2:2932527/149‑1 (MQ=255) cgcCAGCACAAACGCTGACCGTCAAATTATATCAAATCATGCGTAACTCGTCGTTGGCGGTTCTGCGTGATATAGGCGTTGATACCGGTGGTTCCAACTTTCTGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGTTTGTTATAGTAAtt < 1:2211921/149‑2 (MQ=255) aaaCGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCAcgc > 1:1660344/1‑149 (MQ=255) aaaCGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCAcgc < 1:849607/149‑1 (MQ=255) aaCGCTGACCGACAAAGAATATCAAATCCTGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCAcgcg < 1:1345485/149‑1 (MQ=255) aaCGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGTGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCAcgcg > 1:4014769/1‑149 (MQ=255) aaCGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCAcgcg > 1:1213993/1‑149 (MQ=255) cTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTc < 1:3044532/149‑1 (MQ=255) gACCGACAAAGAAGATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTccc < 2:1629033/149‑1 (MQ=255) ccGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGt < 1:2297240/149‑1 (MQ=255) aCAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGttct < 1:3737029/149‑1 (MQ=255) aCAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGttct < 1:2007600/149‑1 (MQ=255) aGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCgg > 1:1815687/1‑149 (MQ=255) aGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCgg < 1:3198798/149‑1 (MQ=255) atatCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGgcgc < 2:223928/149‑1 (MQ=255) tatCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCt < 2:1913704/149‑1 (MQ=255) tCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTgg < 1:2380580/149‑1 (MQ=255) aaaTCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCg > 2:2384001/1‑149 (MQ=255) aaaTCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCg > 1:697643/1‑149 (MQ=255) tGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGaaa > 1:4517142/1‑149 (MQ=255) gCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAg < 1:1008903/149‑1 (MQ=255) gCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAg > 1:785989/1‑149 (MQ=255) gTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCg > 2:3577780/1‑149 (MQ=255) gTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCg > 1:3090639/1‑149 (MQ=255) aaCGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGAc > 2:3691073/1‑149 (MQ=255) aaCGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGAc > 2:3143793/1‑149 (MQ=255) aCGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGAGTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGAcc > 1:939014/1‑149 (MQ=255) cTCGATGGCGGTGCTGCGTGAAATCGGCGTTTAAACCGGTGGTTCCATCGTTCATTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTTTTTTTTAATTGAACCCACGGGTGGCCCGTTGTTGGGCGCTGGCGTCGAAAGCGACCGGtt < 2:3452548/149‑1 (MQ=255) tCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGttt > 2:2030691/1‑149 (MQ=255) tCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGttt > 1:1219112/1‑149 (MQ=255) aTGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTccc > 1:2053385/1‑149 (MQ=255) ggTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTg > 1:2468524/1‑149 (MQ=255) tgctgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCt > 2:490295/1‑149 (MQ=255) tgctgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCt > 1:3830110/1‑149 (MQ=255) tgctgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCt > 1:678524/1‑149 (MQ=255) gctgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCtc > 2:2670333/1‑148 (MQ=255) gctgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTa > 1:164869/1‑149 (MQ=255) ctgcGTTAAATCGGCTTTTAACCCGGTGTTTCCAACTTTCTGTTTGGGGTCAACCCTAAAAAG‑GGTCTTCTTATTGTTATCTAAATGACCCACCGCGTGTCCGGTTCTTCGGCGCTGGGTTCTAAAGCGACCGGTTTCCCGATTGCTaa < 2:10267/149‑1 (MQ=255) tgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTaaa > 1:3447529/1‑149 (MQ=255) tgcGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTaaa > 2:3857659/1‑149 (MQ=255) tGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTgg > 2:4030009/1‑149 (MQ=255) gAAATCGGCGTTGAAACCGGTGGTTCAAAGGTTCTGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATCACCCCACGCGTGGCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTggc < 2:4754013/149‑1 (MQ=255) aacgcGGCGTTGAAACCGG‑GGTTCCCACCTTTTTGTTGGGGTTGACCCCAAAAACGGGTGGTCTTTTTGTTATCGAAATCAACCCACGCGTGACCGGTGGTGCGGCGGGGGCGCCTAAAGCGACCGGTTTCCCGATTGCTAAAGTggcg < 2:418181/145‑1 (MQ=255) aaaTCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTggcg > 2:3315999/1‑149 (MQ=255) aaaTCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTggcg > 2:4367963/1‑149 (MQ=255) tCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATATAAATGAACCCAAGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGgcggcg > 1:365599/1‑149 (MQ=255) gCGTTGACACCGGTGGTTCCAAGGTTCTGTTTGCGGTGAACCCGAAAAAG‑GGTCGTCTGTTTGTTCTATAAATGAACCCACGCGTGGCCCGTTCTTCGGCGCGGGCGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGaaa < 2:2539935/149‑1 (MQ=255) cGTTTAAACGGGGGGTACCACCGTTCTGTTTGCGGTGAACCCTAAAAAG‑GGTGGTCTGTTTGTTATCTAAATCACCCCCCGGGTGCCCGGTTCTGCGGGGGTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAAc < 2:816808/149‑1 (MQ=255) cGTTGAACCCGGTGGTTCCAACTTTCATTTTGCGGTGAACCCGAAAAAC‑GGAGGTCTGTTTGTTATAGAAATGAACCCACGCGTGTCCCGTACTTCGGCGCTGGCGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAAc < 2:372412/149‑1 (MQ=255) cGTTGAAACCGGTGGTTCCAACGTTCTGTTTGCGGTGAACCCGAAAAAG‑GGTCGTCTGATTTTTATATAAATGAACCCACGCGTGTCCCGTACTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAAc < 2:1440367/149‑1 (MQ=255) cGTTGAAACCGGTGGTTCCAACGTTCTGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTTTTTGTTATAGAAATGAACCCACGCGTGTCCCTTTCTTCGGCGCTGGCTTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAAc < 2:296627/149‑1 (MQ=255) gTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACt > 2:3073022/1‑149 (MQ=255) gTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACt > 2:4375716/1‑149 (MQ=255) tgtaaaCCGGTGGTTCCAACGTACAGTGTGCGTTGACCCCTAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTg < 2:4534114/146‑1 (MQ=255) gAACCCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCTAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTGCGGCGCGGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGc < 2:2613093/149‑1 (MQ=255) acccGTTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCgg < 2:1107992/147‑1 (MQ=255) aaCCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCgg > 1:2663077/1‑149 (MQ=255) gtgttTCCACCTTTCTGTTTGGGGCTACCCCTAAAAAG‑GGTGTTCTTTTTTTTAAATAAATTAACCCACGGGTGGCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGt < 2:1649748/149‑1 (MQ=255) gtggtTCCAACGTTCTGTTTGCGGTGACCCCGAAAAAG‑GGTCGTCTGTTTGTTATATAAATCAACCCCCGCGGGTCCCGTTCTGCGGCGCGGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGt < 1:2736168/149‑1 (MQ=255) gtggtTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGt > 2:2102848/1‑149 (MQ=255) gtggtTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGt > 1:425120/1‑149 (MQ=255) ggtTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTa > 2:3735538/1‑149 (MQ=255) ggtTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCAACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTa < 2:1527211/149‑1 (MQ=255) gtTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTac > 2:4242945/1‑149 (MQ=255) ttCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTaca > 2:1416992/1‑149 (MQ=255) ccAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACAcc > 1:1510661/1‑149 (MQ=255) cAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACAccc > 1:658401/1‑149 (MQ=255) aaCGTTCTTTTTGCGGTTAACCCGAAAACC‑GGTCGTCTTATTTTTTTAGAATTGAACCCACGCTTGTCCCGTTCTTCGGCGCTGGCTTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCt < 2:2782887/149‑1 (MQ=255) aaCGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTTTTTGTTATAGAAATGAACCCACGCGGGGCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCt < 2:1438769/149‑1 (MQ=255) tctttCTGTTTGCGGTTAACCCAAAAACG‑GGTGGTCTTTTTTTTATACAAATCACCCCCGGCGGGTCCCGTTCTGGGGCGCGGGGGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTc < 1:3358257/146‑1 (MQ=255) cGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTcg > 2:664359/1‑149 (MQ=255) cGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTcg > 2:1277671/1‑149 (MQ=255) tCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTcgacg > 1:3759652/1‑149 (MQ=255) cttgggCGGTCAACCCCAAAAAC‑GGTCGTATTCTGGTTAAAGAATTCAACCCACGGGGGCCCCGTTGTGCGGGGCGGGCTACCAACGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGaa < 1:2642024/144‑1 (MQ=255) gTTTGCGGTTACCCCTAAAATG‑GTTCTTCTGTTTGTTATCGAAATCACCCCCCGGGTGCCCCGTTCTGCGGCGCGGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAAc < 1:3468595/149‑1 (MQ=255) ttGCGGTGAACCCTAAAACG‑GGTCGTCTTATGGTTATAGAAATGACCCCCGGCGGGTCCGGTTCTGCGGGGCGGGCGTCGAACGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACtg < 2:2819423/149‑1 (MQ=255) ggTGAACCCGAAAAAC‑GGTGGTCTGTTTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTGGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACtgatga < 2:3060205/149‑1 (MQ=255) gAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACg > 1:1125396/1‑149 (MQ=255) gAACCCGAAAAAC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACg > 1:2981497/1‑149 (MQ=255) ccccGAAAAAG‑GGTGGTGTTTTTTTTATATAAATGAACCCCGGGGTGTCCCGTTGTTGGGCGCTGGGGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGAc < 1:1100498/148‑1 (MQ=255) aCCCTAAAAAG‑GGTCGTCTTTTTTTTATATAAATGAACCCAGGGGGGCCCCGTTCTTGGGCGGTGGCGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGAc < 1:1951752/149‑1 (MQ=255) cccTAAAAAG‑GGTCTTTTTTTTTTTATATAAATTAACCCCGGGGTGCCCCGTTCTTCGGCGCTGGGGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACa < 1:1167488/149‑1 (MQ=255) aaaaC‑GGTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACt > 2:2469113/1‑149 (MQ=255) c‑GGTCGTCGGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCg > 2:1677061/1‑149 (MQ=255) ggTCGTCTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCgg > 1:4383246/1‑149 (MQ=255) ttcTGATTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTGCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGt < 2:2299562/148‑1 (MQ=255) gtcTGTTTTTTTTAGAATTGACCCCCCGCGTGTCCCGTTCTTCGGCGGGGGCTTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGt < 2:1221784/149‑1 (MQ=255) gtcTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGt < 2:792087/149‑1 (MQ=255) gtcTGATTGTTATAGAAATGAACCCCCGCGTGGCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGt < 2:4234477/149‑1 (MQ=255) tgtttGTTATACAAATGAACCCACGGGTGGCCCGTGTTGGGGCGGGGGGGTCTAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACt < 1:1880610/146‑1 (MQ=255) aTTGTTATATAAATGAACCCCCGCGTGTCCGGTTCTGCGGCGGTGGCGTCGAACGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTcc < 2:3226643/149‑1 (MQ=255) aTTGTTATAGAAATGAACCCCCGCGTGGCCGGTTCTTCGGCGCGGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTcc < 2:968567/149‑1 (MQ=255) aTTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTcc > 2:1307412/1‑149 (MQ=255) aTTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTcc > 1:2694/1‑149 (MQ=255) aTTGTTATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTcc > 1:1808081/1‑149 (MQ=255) ttGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCg > 2:1925811/1‑149 (MQ=255) ttATAGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCGGcc > 1:3622549/1‑149 (MQ=255) tataGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCGGcct > 2:2290861/1‑149 (MQ=255) | TCGCGCCAGCCCAAACGCTGACCGACAAAGAATATCAAATCATGCGTAACGCCTCGATGGCGGTGCTGCGTGAAATCGGCGTTGAAACCGGTGGTTCCAACGTTCAGTTTGCGGTGAACCCGAAAAAC‑GGTCGTCTGATTGTTATCGAAATGAACCCACGCGTGTCCCGTTCTTCGGCGCTGGCGTCGAAAGCGACCGGTTTCCCGATTGCTAAAGTGGCGGCGAAACTGGCGGTGGGTTACACCCTCGACGAACTGATGAACGACATCACTGGCGGACGTACTCCGGCCT > CP009273/31565‑31855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |