| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,892,304 | C→A | 90.6% | P150P (CCG→CCT) | yieK ← | putative 6‑phosphogluconolactonase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,892,304 | 0 | C | A | 90.6% | 863.1 / 79.1 | 318 | P150P (CCG→CCT) | yieK | putative 6‑phosphogluconolactonase |
| Reads supporting (aligned to +/- strand): ref base C (20/10); new base A (149/139); total (169/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 318 total aligned reads displayed.
GCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATCAATAG > CP009273/3892158‑3892449 | gcTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCgg > 2:1815361/1‑149 (MQ=255) cTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAggg > 2:724782/1‑149 (MQ=255) cTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAggg < 2:3297949/149‑1 (MQ=255) cTTTACCCGCGCCGCTGACAATTATCAGCAAGTGTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAggg < 2:3917964/149‑1 (MQ=255) aCCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACt < 1:1067602/149‑1 (MQ=255) cgcgCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCa < 2:577470/149‑1 (MQ=255) gccgcTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACgg > 1:4379987/1‑149 (MQ=255) ccgcTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGt > 2:3588242/1‑149 (MQ=255) ccgcTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTAGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGt > 2:2930133/1‑149 (MQ=255) cgcTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGtt < 1:3611304/149‑1 (MQ=255) gcTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGttt < 2:1571809/149‑1 (MQ=255) gcTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGttt > 1:3000276/1‑149 (MQ=255) tGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGc > 2:1034629/1‑149 (MQ=255) tGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGc > 1:3804083/1‑149 (MQ=255) taCAATTATCAGCAAGTGTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCt < 2:281792/148‑1 (MQ=255) gACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCt > 1:4122543/1‑149 (MQ=255) gACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCt < 1:3404108/149‑1 (MQ=255) aCAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTc > 1:434007/1‑149 (MQ=255) cAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCa > 2:1876013/1‑149 (MQ=255) aTTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATg < 2:4738427/149‑1 (MQ=255) aTTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATg > 2:2873104/1‑149 (MQ=255) tATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGa > 1:4267692/1‑149 (MQ=255) tATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGa > 1:3893380/1‑149 (MQ=255) aTCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGac > 1:4627987/1‑148 (MQ=255) aTCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGaa > 1:2590581/1‑149 (MQ=255) aTCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGaa > 1:4052350/1‑149 (MQ=255) aTCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGaa > 1:1357090/1‑149 (MQ=255) cAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAAt < 2:114495/149‑1 (MQ=255) aGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATg > 1:454473/1‑149 (MQ=255) aGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATg > 1:1741960/1‑149 (MQ=255) aGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATg > 1:948091/1‑149 (MQ=255) gCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATgg > 2:2390516/1‑149 (MQ=255) gCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATgg < 2:481611/149‑1 (MQ=255) aaGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGt > 2:1317257/1‑149 (MQ=255) aaGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGt < 1:1267129/149‑1 (MQ=255) gTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCg < 2:2801323/149‑1 (MQ=255) tttttCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGAGAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGt > 2:2022248/1‑149 (MQ=255) ttttCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTa < 2:3241646/149‑1 (MQ=255) ttttCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTa < 2:1650188/149‑1 (MQ=255) ttCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATCTCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTAtt < 1:876977/149‑1 (MQ=255) ttCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTAtt < 2:407082/149‑1 (MQ=255) ttCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTAtt < 1:1319873/149‑1 (MQ=255) gccgccATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCgg > 1:2953994/1‑149 (MQ=255) ccgccATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGc < 2:1690184/149‑1 (MQ=255) ccATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCaaa > 2:2136240/1‑149 (MQ=255) ccATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCaaa < 2:2221620/149‑1 (MQ=255) cATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAAt < 2:866579/149‑1 (MQ=255) tgatgCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTg > 1:282771/1‑149 (MQ=255) gatgCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGc > 2:2468927/1‑149 (MQ=255) cGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAAt < 1:4747081/149‑1 (MQ=255) cGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAAt < 2:3785961/149‑1 (MQ=255) ccccATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGAc < 1:1801018/149‑1 (MQ=255) ccccATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGAc < 1:4190938/149‑1 (MQ=255) cccATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGAcc < 2:2413659/149‑1 (MQ=255) tCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCt > 1:1129493/1‑149 (MQ=255) tCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCt > 1:3483378/1‑149 (MQ=255) cGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTg < 1:2232114/149‑1 (MQ=255) cGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTg > 1:3453702/1‑149 (MQ=255) tCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCa > 2:2104720/1‑149 (MQ=255) aCGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCCTCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCAcc < 2:4151578/149‑1 (MQ=255) cGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCt > 1:264521/1‑149 (MQ=255) tAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTaa < 1:643337/149‑1 (MQ=255) tAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTaa < 2:3200010/149‑1 (MQ=255) tAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTaa < 1:2724806/149‑1 (MQ=255) gCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATc > 2:442011/1‑149 (MQ=255) cTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATcc < 2:3470568/149‑1 (MQ=255) tGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGACATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAATTGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATccc < 1:1235151/149‑1 (MQ=255) gTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa > 1:198826/1‑149 (MQ=255) cAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGc < 2:138349/149‑1 (MQ=255) aGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCCTCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGca < 2:4257818/149‑1 (MQ=255) aGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGTGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGca > 2:1010426/1‑149 (MQ=255) cTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCaccacc > 1:4467303/1‑149 (MQ=255) tAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCAccacca > 1:23737/1‑149 (MQ=255) gTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTc < 2:1474660/149‑1 (MQ=255) gTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTc < 2:4513001/149‑1 (MQ=255) ccgccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc < 1:1592270/149‑1 (MQ=255) aaCTCGCCATGCGCCCCAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcg > 1:2539338/1‑149 (MQ=255) aaCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcg > 2:2363514/1‑149 (MQ=255) aCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcgc > 1:3653274/1‑149 (MQ=255) aCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcgc > 1:2156377/1‑149 (MQ=255) cGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGcc < 1:3710400/149‑1 (MQ=255) cGCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGcc < 2:2594082/149‑1 (MQ=255) gCCATGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCa > 2:537725/1‑149 (MQ=255) aTGCGCCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGtt < 2:3504892/149‑1 (MQ=255) cgcCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt < 1:2355217/149‑1 (MQ=255) gcCACAATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTg < 1:1472971/149‑1 (MQ=255) cacaATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGAt < 1:3123580/149‑1 (MQ=255) acaATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATc > 2:3063319/1‑149 (MQ=255) acaATATCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATc > 2:2682655/1‑149 (MQ=255) atatCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATg < 1:578223/149‑1 (MQ=255) atCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCt < 1:3326679/149‑1 (MQ=255) atCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCt < 1:48031/149‑1 (MQ=255) atCAACCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAAGGGGTCGTATTCGGCAAATTGCCACAAACATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCt < 2:4036940/149‑1 (MQ=255) aCCATCTCTCCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTcgcg > 2:1940747/1‑149 (MQ=255) tctcCCTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGtt > 2:1700669/1‑149 (MQ=255) cccTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATc < 1:2481852/149‑1 (MQ=255) cTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATCaa > 2:4781741/1‑149 (MQ=255) cTGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATCaa < 2:2197653/149‑1 (MQ=255) tGGATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATCAAt > 2:669296/1‑149 (MQ=255) ggATAGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATCAATa < 2:1752974/149‑1 (MQ=255) | GCTTTACCCGCGCCGCTGACAATTATCAGCAAGTTTTTCGCCGCCATGATGCTTTTCGGCCCCATCGTCACGTAGCTGTCAGGCACTAACGAAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCATGCTCGCGGTAGTTATCAATAG > CP009273/3892158‑3892449 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |