| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,923,028 | C→A | 100% | D476Y (GAC→TAC) | ravA ← | hexameric AAA+ MoxR family ATPase, putative molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,923,028 | 0 | C | A | 98.8% | 1090.7 / 2.4 | 326 | D476Y (GAC→TAC) | ravA | hexameric AAA+ MoxR family ATPase, putative molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (2/2); new base A (176/146); total (178/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.53e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 326 total aligned reads displayed.
CCAGCAGTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTGT > CP009273/3922882‑3923173 | ccAGCAGTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAAACTGTGCACCGACATCCTGAAGGCTGGCTTCAATGCGACCTAACCAGTAGc > 2:170823/1‑149 (MQ=255) cagTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAgg < 2:4523576/149‑1 (MQ=255) agTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAggg < 1:297620/149‑1 (MQ=255) tGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGAt > 2:4394058/1‑149 (MQ=255) cGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATaa > 1:4045988/1‑149 (MQ=255) atgatCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAAc > 1:866341/1‑149 (MQ=255) tgatCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACa > 2:721150/1‑149 (MQ=255) tgatCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACa < 2:3972513/149‑1 (MQ=255) tcatcTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGAc < 2:3180617/149‑1 (MQ=255) tctcTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAtt < 2:2996812/149‑1 (MQ=255) tctcGTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAtt < 1:2235922/149‑1 (MQ=255) ctctTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAttt < 1:4478533/149‑1 (MQ=255) tctTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAtttt < 1:1205043/149‑1 (MQ=255) ctTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAttttt > 1:609663/1‑149 (MQ=255) tCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGGGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGc < 2:3427855/149‑1 (MQ=255) cGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCt < 1:2170578/149‑1 (MQ=255) cGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCt < 1:468911/149‑1 (MQ=255) gATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTg < 2:3800294/149‑1 (MQ=255) aTCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGt > 1:1966058/1‑149 (MQ=255) aTCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGt > 1:3795130/1‑149 (MQ=255) aTCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGt < 1:3335703/149‑1 (MQ=255) tCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGtt < 1:3421829/149‑1 (MQ=255) aaTCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCg > 2:3544621/1‑149 (MQ=255) aaTCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCg > 2:4197115/1‑149 (MQ=255) aaTCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCg > 2:1052836/1‑149 (MQ=255) aTCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGc > 2:1472462/1‑149 (MQ=255) tCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCt < 2:326006/149‑1 (MQ=255) ctctTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGaa < 2:3105497/149‑1 (MQ=255) ctctTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGaa < 1:4163504/149‑1 (MQ=255) tGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCgt > 2:4133850/1‑149 (MQ=255) tGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCgt > 1:3828156/1‑149 (MQ=255) tGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCgt > 1:2043239/1‑149 (MQ=255) cGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGtt < 1:4391676/149‑1 (MQ=255) gCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgc > 2:2477345/1‑149 (MQ=255) aGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgcttg > 2:2025880/1‑149 (MQ=255) aGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgcttg > 1:725673/1‑149 (MQ=255) aTCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTgcgc > 2:1834473/1‑149 (MQ=255) tCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGcc > 1:1491277/1‑149 (MQ=255) acaTTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAg > 2:2179213/1‑149 (MQ=255) aTTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTc < 1:2817425/149‑1 (MQ=255) aTTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTc < 1:2116358/149‑1 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCt > 1:2187575/1‑149 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCt > 1:391424/1‑149 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCt > 2:3093868/1‑149 (MQ=255) aGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCtt > 1:3109811/1‑149 (MQ=255) aGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCtt < 2:4679041/149‑1 (MQ=255) gCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCttt < 1:4775690/149‑1 (MQ=255) gCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCttt > 2:2903100/1‑149 (MQ=255) cGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTc < 2:940098/149‑1 (MQ=255) gTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCa > 1:2370993/1‑149 (MQ=255) tATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCaa < 1:1832213/149‑1 (MQ=255) tCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGc > 2:349280/1‑149 (MQ=255) tCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGc > 2:2640153/1‑149 (MQ=255) tCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGc < 2:3760432/149‑1 (MQ=255) ccAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGct > 1:925476/1‑149 (MQ=255) cAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGctc < 1:160384/149‑1 (MQ=255) aGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGctct < 2:4400275/149‑1 (MQ=255) gCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCtt < 2:2802899/149‑1 (MQ=255) ttAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCa > 2:3318128/1‑149 (MQ=255) gCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgtt < 1:1903600/149‑1 (MQ=255) ttgttgTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgtt > 1:2848577/1‑149 (MQ=255) ttgttgTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgtt > 2:4479488/1‑149 (MQ=255) tgttgtGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttg < 2:3379741/149‑1 (MQ=255) gttgtGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttgt < 2:1176107/149‑1 (MQ=255) ttgtGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttgtt > 2:363738/1‑149 (MQ=255) tgtgCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGttt < 1:2327517/149‑1 (MQ=255) gtgCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGtttt > 1:3529961/1‑149 (MQ=255) ggCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCa > 1:2517095/1‑149 (MQ=255) gCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATACACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCAc > 2:197572/1‑149 (MQ=255) aaTCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGCTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAg > 1:1801413/1‑149 (MQ=255) cTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCa > 2:806940/1‑149 (MQ=255) tgtgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAg > 1:1833280/1‑149 (MQ=255) tgtgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAg < 1:4280205/149‑1 (MQ=255) tgtgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAg > 2:2564684/1‑149 (MQ=255) cACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCt < 1:2640153/149‑1 (MQ=255) aCCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCtt < 2:1160377/149‑1 (MQ=255) gACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAg > 2:1374372/1‑149 (MQ=255) aCATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGc > 2:3728420/1‑149 (MQ=255) aCATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGc > 2:2078043/1‑149 (MQ=255) cATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGcc < 2:499583/149‑1 (MQ=255) cATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGcc < 2:4046046/149‑1 (MQ=255) cTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATg > 1:1443797/1‑149 (MQ=255) cTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATg < 1:1271986/149‑1 (MQ=255) tAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAAc < 2:4262953/149‑1 (MQ=255) aGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAAcc > 2:1505585/1‑149 (MQ=255) ggctggctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCg > 1:3197280/1‑149 (MQ=255) tggctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGa > 2:2236227/1‑149 (MQ=255) ctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGt < 1:3670105/149‑1 (MQ=255) ttCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTg > 1:4385417/1‑149 (MQ=255) tCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGc > 2:1190854/1‑149 (MQ=255) cAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGcc < 1:4346495/149‑1 (MQ=255) aaTGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCa > 1:3702890/1‑149 (MQ=255) aaTGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCa > 2:2323674/1‑149 (MQ=255) tGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGc > 1:2548215/1‑149 (MQ=255) gACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTa > 1:3750566/1‑149 (MQ=255) gACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTa > 1:3982878/1‑149 (MQ=255) aCCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTAc < 1:1010786/149‑1 (MQ=255) tAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGc > 1:110042/1‑149 (MQ=255) ccAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCtt < 2:57435/149‑1 (MQ=255) aGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTGt > 1:4570681/1‑149 (MQ=255) | CCAGCAGTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTGT > CP009273/3922882‑3923173 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |