| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,182,646 | G→T | 7.9% | I40I (ATC→ATA) | thiS ← | immediate sulfur donor in thiazole formation |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,182,646 | 0 | G | T | 7.9% | 1095.3 / 39.8 | 296 | I40I (ATC→ATA) | thiS | immediate sulfur donor in thiazole formation |
| Reads supporting (aligned to +/- strand): ref base G (149/123); new base T (16/8); total (165/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.91e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 298 total aligned reads displayed.
AGAAGCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCGGGCAACCACT > CP009273/4182498‑4182793 | agaagCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACg < 1:4264064/149‑1 (MQ=255) agCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGAtt < 1:2113594/149‑1 (MQ=255) aTTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGAGTTGCTg > 1:3203979/1‑149 (MQ=255) tttCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGa > 1:497655/1‑149 (MQ=255) tttCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGa > 1:2235933/1‑149 (MQ=255) tCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGAtt < 1:2592195/149‑1 (MQ=255) tgtgCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATc < 1:608879/149‑1 (MQ=255) ccGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCa < 1:176553/149‑1 (MQ=255) cGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCag < 2:88952/149‑1 (MQ=255) gTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCagag > 1:2818076/1‑149 (MQ=255) tAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGc > 2:4023091/1‑149 (MQ=255) aGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCgcgc > 1:2694839/1‑149 (MQ=255) gtgAATCAAACGTTTTTTCCGCACTACGTAACATGTCAACCCCCTGCAATATCCTGAAAAAGCAGGATCTGGTCGCCATCCTGCAAGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTTATTAATCGCCAGAGCCGCGCCCGc < 1:541685/149‑1 (MQ=255) gAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCtt < 1:4402674/149‑1 (MQ=255) gAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCtt > 2:3416910/1‑149 (MQ=255) aaTCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTg > 2:509033/1‑149 (MQ=255) aTCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGt < 2:4185787/149‑1 (MQ=255) aTCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGt > 2:737213/1‑149 (MQ=255) aTCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGt > 2:3343172/1‑149 (MQ=255) aTCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGAGTAATCGCCAGAGCCGCGCCCGCTTGt > 2:1844575/1‑149 (MQ=255) tCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTc < 2:690436/149‑1 (MQ=255) aaCGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGtt > 2:3895788/1‑149 (MQ=255) gTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGt > 1:2866172/1‑149 (MQ=255) tCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGtt > 2:4730207/1‑149 (MQ=255) aaTACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTcc > 2:454148/1‑149 (MQ=255) aTACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTAGGTCGAGTTGCTCCa > 2:4192942/1‑149 (MQ=255) aTACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCa > 2:2351031/1‑149 (MQ=255) tACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCag < 2:1477367/149‑1 (MQ=255) tACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCag > 2:3562518/1‑149 (MQ=255) tACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCag > 2:630025/1‑149 (MQ=255) gTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGGTGGTCGAGTTGCTCCagtag < 1:3319841/149‑1 (MQ=255) tAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCagtagt < 1:3587238/149‑1 (MQ=255) aaCATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGtt < 2:1414442/149‑1 (MQ=255) aCATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTc < 1:1483910/149‑1 (MQ=255) aCATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTc > 1:684706/1‑149 (MQ=255) aCATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTAGTCGTTGGTCGAGTTGCTCCAGTAGTTc > 2:1663795/1‑149 (MQ=255) cATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCg > 1:626071/1‑149 (MQ=255) aTTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGt < 1:3766606/149‑1 (MQ=255) aTTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGt > 1:4541032/1‑149 (MQ=255) tttCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTg > 1:748980/1‑149 (MQ=255) ttCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGa < 1:1327993/149‑1 (MQ=255) ttCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGa > 2:2400161/1‑149 (MQ=255) cAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAAc < 1:1040158/149‑1 (MQ=255) aaCCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACa < 2:610301/149‑1 (MQ=255) cccccTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGt > 2:560449/1‑149 (MQ=255) cccccTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGt > 2:1383584/1‑149 (MQ=255) cccTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTCATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGttt > 1:1304532/1‑149 (MQ=255) cccTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGttt < 1:2525044/149‑1 (MQ=255) gCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGccc < 2:256623/149‑1 (MQ=255) aTACCCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCcggc < 2:2752175/149‑1 (MQ=255) aTAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCcggc > 2:1964833/1‑149 (MQ=255) aTAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCcggc > 2:361971/1‑149 (MQ=255) tGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCa > 1:4107738/1‑149 (MQ=255) aaaaaGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACt > 1:1407636/1‑149 (MQ=255) aaaaGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTg > 1:468577/1‑149 (MQ=255) aGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCAt < 2:2029181/149‑1 (MQ=255) gCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATc > 2:2074093/1‑149 (MQ=255) aGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGc < 1:825003/149‑1 (MQ=255) gATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCTGCGGCGCACTGCATCGCtt < 2:1136428/149‑1 (MQ=255) cTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGAt < 2:493861/149‑1 (MQ=255) tGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATc < 2:3560746/149‑1 (MQ=255) ggTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTGGCTGATGAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTCGGTCGTGAACAGAGTGCCCGGCGGCGCACTGCATCGCTAGATCg > 2:2644266/1‑149 (MQ=255) gTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGt < 2:2297963/149‑1 (MQ=255) gTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGt > 2:4449385/1‑149 (MQ=255) cATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAAc < 2:2235933/149‑1 (MQ=255) tCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAg < 1:3236232/149‑1 (MQ=255) tCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAg > 1:1713817/1‑149 (MQ=255) tCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAg > 1:2902388/1‑149 (MQ=255) tCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAg > 1:300027/1‑149 (MQ=255) tCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAg > 1:4731985/1‑149 (MQ=255) ccTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAgg > 1:3052187/1‑149 (MQ=255) cTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGa < 1:1868539/149‑1 (MQ=255) cTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGa < 1:2530506/149‑1 (MQ=255) gCACGATATGGTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATc < 2:2984549/149‑1 (MQ=255) cACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCt < 1:2455311/149‑1 (MQ=255) cGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGc < 2:1238056/149‑1 (MQ=255) gATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCa < 1:3898040/149‑1 (MQ=255) atGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTg < 2:4071949/149‑1 (MQ=255) tGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGc > 2:834236/1‑149 (MQ=255) tGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGAGCGTTAAACAGGATCTGCATTGc > 2:1069384/1‑149 (MQ=255) gTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCt < 1:1095405/149‑1 (MQ=255) gTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCt < 1:3451214/149‑1 (MQ=255) tGCGCCCACTGCTCACGCGGGACTATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCTGTTGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTtc < 1:2332976/149‑1 (MQ=255) tGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTtc < 2:4058577/149‑1 (MQ=255) cgcCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTtcct < 2:3605088/149‑1 (MQ=255) ccACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCg > 1:851526/1‑149 (MQ=255) cACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGc > 2:1584959/1‑149 (MQ=255) cACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGc > 1:1657936/1‑149 (MQ=255) aCTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCa > 2:252988/1‑149 (MQ=255) aCTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCa < 2:3744841/149‑1 (MQ=255) tGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATa < 1:2483762/149‑1 (MQ=255) gCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATAc < 2:3932806/149‑1 (MQ=255) gCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATAc > 2:857850/1‑149 (MQ=255) tCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCg > 2:1688768/1‑149 (MQ=255) tCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCg < 1:4444675/149‑1 (MQ=255) tCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCg > 1:4086728/1‑149 (MQ=255) aCGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCGTCCTCCGCATACCggg > 2:2908176/1‑149 (MQ=255) cgGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCGGGCaa < 2:2468796/149‑1 (MQ=255) aCGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCGGGCAACCAc > 2:4351482/1‑149 (MQ=255) aCGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCGGGCAACCAc < 1:3343172/149‑1 (MQ=255) | AGAAGCGAATTTCCCTGTGCCGGTAAACAGATGTGAATCAAACGTTTTGTCCGCAATACGTAACATTTCAACCCCCTGCAATAACCTGAAAAAGCAGGATCTGGTCGCCATCCTGCACGATATGTTGCGCCCACTGCTCACGCGGGACGATTTGCTGATTAATCGCCAGAGCCGCGCCCGCTTGTCGTTGGTCGAGTTGCTCCAGTAGTTCGTGAACAGTTTGCCCGGCGGCGCACTGCATCGCTTGATCGTTAAACAGGATCTGCATTGCTTCCTCCGCATACCGGGCAACCACT > CP009273/4182498‑4182793 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |