Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,358,390 A→C 89.5% intergenic (‑246/‑91) aspA ← / → fxsA aspartate ammonia‑lyase/suppressor of F exclusion of phage T7

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,358,3900AC89.5% 1049.2 / 64.5 311intergenic (‑246/‑91)aspA/fxsAaspartate ammonia‑lyase/suppressor of F exclusion of phage T7
Reads supporting (aligned to +/- strand):  ref base A (16/17);  new base C (131/147);  total (147/164)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.24e-01

Only 100 of 311 total aligned reads displayed.

GAATACCCGAGATCATATGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAA  >  CP009273/4358245‑4358535
                                                                                                                                                 |                                                                                                                                                 
gAATACCCGAGATCATATGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACAtt                                                                                                                                                >  1:192324/1‑149 (MQ=255)
     cccGAGATCATATGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATATTTGCGCAAACATATTGAAATTTTGCt                                                                                                                                           >  2:2171074/1‑149 (MQ=255)
       cGAGATCATATGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTaa                                                                                                                                         <  2:4045605/149‑1 (MQ=255)
             cATATGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACca                                                                                                                                   <  1:1959012/149‑1 (MQ=255)
              atatGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGAacac                                                                                                                                  >  2:110565/1‑149 (MQ=255)
               tatGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACcaca                                                                                                                                 >  1:564206/1‑149 (MQ=255)
                atGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACaa                                                                                                                                >  2:3324276/1‑149 (MQ=255)
                 tgctgcTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAat                                                                                                                               >  2:1534718/1‑149 (MQ=255)
                 tgctgcTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAat                                                                                                                               >  2:3813885/1‑149 (MQ=255)
                 tgctgcTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAat                                                                                                                               <  1:4031943/149‑1 (MQ=255)
                  gctgctTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAata                                                                                                                              >  2:1946168/1‑149 (MQ=255)
                   ctgctTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAatat                                                                                                                             <  2:1350622/149‑1 (MQ=255)
                    tgctTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAAtata                                                                                                                            >  1:4321637/1‑149 (MQ=255)
                     gctTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATaa                                                                                                                           <  2:2489874/149‑1 (MQ=255)
                        tGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCt                                                                                                                        <  2:4325733/149‑1 (MQ=255)
                           ggATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTaaa                                                                                                                     <  2:2853033/149‑1 (MQ=255)
                           ggATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTaaa                                                                                                                     <  1:3981848/149‑1 (MQ=255)
                             aTTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAAcg                                                                                                                   >  1:4180456/1‑149 (MQ=255)
                               ttCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAAcgcg                                                                                                                 <  2:3135076/149‑1 (MQ=255)
                                 cTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGAt                                                                                                               <  2:2107184/149‑1 (MQ=255)
                                  tACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGAtt                                                                                                              >  1:3065933/1‑149 (MQ=255)
                                  tACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGAtt                                                                                                              <  1:1644801/149‑1 (MQ=255)
                                      gTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCa                                                                                                          >  2:3282945/1‑149 (MQ=255)
                                        aaTCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAAc                                                                                                        <  1:3875944/149‑1 (MQ=255)
                                         aTCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAAcc                                                                                                       >  1:1356022/1‑149 (MQ=255)
                                          tCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAAccc                                                                                                      >  1:2687746/1‑149 (MQ=255)
                                            tGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCAt                                                                                                    <  2:2308970/149‑1 (MQ=255)
                                            tGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCAt                                                                                                    >  1:3333835/1‑149 (MQ=255)
                                             ggATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCAtt                                                                                                   <  1:4103983/149‑1 (MQ=255)
                                               aTCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAAAGCGATTCGCAACCCATTCa                                                                                                 >  1:2137157/1‑149 (MQ=255)
                                                 cACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAgg                                                                                               <  2:801964/149‑1 (MQ=255)
                                                     ttAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGc                                                                                           <  2:3224412/149‑1 (MQ=255)
                                                       aaGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCg                                                                                         <  1:2195543/149‑1 (MQ=255)
                                                        aGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCgg                                                                                        <  1:2626432/149‑1 (MQ=255)
                                                         gtgtCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCggg                                                                                       <  1:3175835/149‑1 (MQ=255)
                                                           gtCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGt                                                                                     <  2:2143465/149‑1 (MQ=255)
                                                            tCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGtt                                                                                    <  2:1205221/149‑1 (MQ=255)
                                                               gTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAAc                                                                                 <  2:397201/149‑1 (MQ=255)
                                                                 ttttACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCg                                                                               <  2:2899659/149‑1 (MQ=255)
                                                                 ttttACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCg                                                                               <  2:507514/149‑1 (MQ=255)
                                                                   ttACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGgc                                                                             <  1:701392/149‑1 (MQ=255)
                                                                   ttACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGgc                                                                             <  2:1153784/149‑1 (MQ=255)
                                                                     aCCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGgctg                                                                           >  1:4701631/1‑149 (MQ=255)
                                                                     aCCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGgctg                                                                           >  2:441334/1‑149 (MQ=255)
                                                                       cccTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGgctgct                                                                         <  2:4153486/149‑1 (MQ=255)
                                                                       cccTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGgctgct                                                                         >  2:248476/1‑149 (MQ=255)
                                                                          ttAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTAtt                                                                      <  2:3166737/149‑1 (MQ=255)
                                                                            aaTTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTAc                                                                    <  2:4192888/149‑1 (MQ=255)
                                                                              ttattaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAg                                                                  >  1:1261408/1‑149 (MQ=255)
                                                                              ttattaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAg                                                                  >  1:3734238/1‑149 (MQ=255)
                                                                                attaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGga                                                                >  1:4500569/1‑149 (MQ=255)
                                                                                attaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGga                                                                >  2:2728250/1‑149 (MQ=255)
                                                                                attaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGga                                                                <  2:3885670/149‑1 (MQ=255)
                                                                                attaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGga                                                                >  2:1616470/1‑149 (MQ=255)
                                                                                 ttaATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGgag                                                               >  2:1283066/1‑149 (MQ=255)
                                                                                  taATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGgaga                                                              <  2:3382446/149‑1 (MQ=255)
                                                                                   aaTTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGaa                                                             >  1:1034216/1‑149 (MQ=255)
                                                                                   aaTTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGaa                                                             >  1:4462331/1‑149 (MQ=255)
                                                                                       tgtgAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCt                                                         <  2:423146/149‑1 (MQ=255)
                                                                                          gAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTg                                                      >  2:186054/1‑149 (MQ=255)
                                                                                           aaaTAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTgc                                                     <  2:2500378/149‑1 (MQ=255)
                                                                                              tAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCt                                                  >  2:463507/1‑149 (MQ=255)
                                                                                              tAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCt                                                  <  1:4009369/149‑1 (MQ=255)
                                                                                                       gCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCtt                                         <  1:2790501/149‑1 (MQ=255)
                                                                                                         tttGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCtttt                                       <  2:3496014/149‑1 (MQ=255)
                                                                                                            gtgATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTAtt                                    <  1:1781386/147‑1 (MQ=255)
                                                                                                            gggATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTAtt                                    <  1:4171068/149‑1 (MQ=255)
                                                                                                             ggATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTg                                   >  1:3377804/1‑149 (MQ=255)
                                                                                                             ggATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTg                                   >  1:3923166/1‑149 (MQ=255)
                                                                                                              gATTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGc                                  >  1:2890316/1‑149 (MQ=255)
                                                                                                               aTTACTACCAAAAATAGTTGCGCACACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGcc                                 <  2:2547809/149‑1 (MQ=255)
                                                                                                               aTTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGcc                                 >  2:2681838/1‑149 (MQ=255)
                                                                                                               aTTACTACCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGcc                                 <  1:3286168/149‑1 (MQ=255)
                                                                                                                 tactacCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCAt                               <  2:879762/149‑1 (MQ=255)
                                                                                                                   ctacCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCAttt                             <  1:186054/149‑1 (MQ=255)
                                                                                                                   ctacCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTAGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCAttt                             <  2:3713940/149‑1 (MQ=255)
                                                                                                                    tacCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCAtttt                            >  2:4674222/1‑149 (MQ=255)
                                                                                                                    tacCAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAAGATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCAtttt                            >  2:1332494/1‑149 (MQ=255)
                                                                                                                     acCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTc                           <  1:1283087/149‑1 (MQ=255)
                                                                                                                       cAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCt                         <  1:141937/149‑1 (MQ=255)
                                                                                                                       cAAAAATAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCt                         <  2:4264334/149‑1 (MQ=255)
                                                                                                                        aaaaaTAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCtt                        >  2:570357/1‑149 (MQ=255)
                                                                                                                         aaaaTAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCttt                       <  2:1131548/149‑1 (MQ=255)
                                                                                                                            aTAGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTGTTATTGCCATTTTCCTTTATg                    >  2:1772564/1‑149 (MQ=255)
                                                                                                                             tAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGt                   >  1:3661783/1‑149 (MQ=255)
                                                                                                                              aGTTGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTc                  >  1:2071183/1‑149 (MQ=255)
                                                                                                                                 tGCGCAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCtat               <  1:782204/149‑1 (MQ=255)
                                                                                                                                  gcgcAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCtata              >  2:2003722/1‑149 (MQ=255)
                                                                                                                                    gcAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATAtt            >  1:234826/1‑149 (MQ=255)
                                                                                                                                    gcAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATAtt            <  1:4403182/149‑1 (MQ=255)
                                                                                                                                    gcAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATAtt            >  2:697145/1‑149 (MQ=255)
                                                                                                                                     cAAACATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTg           <  1:1535456/149‑1 (MQ=255)
                                                                                                                                       aaCATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTgag         >  2:4095483/1‑149 (MQ=255)
                                                                                                                                       aaCATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTgag         <  1:2999479/149‑1 (MQ=255)
                                                                                                                                       aaCATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTgag         >  2:663004/1‑149 (MQ=255)
                                                                                                                                       aaCATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTgag         >  2:3053445/1‑149 (MQ=255)
                                                                                                                                         cATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGAt       <  1:238915/149‑1 (MQ=255)
                                                                                                                                         cATCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGAt       <  1:4667166/149‑1 (MQ=255)
                                                                                                                                          aTCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGAtt      >  1:2841655/1‑149 (MQ=255)
                                                                                                                                           tCTTGACATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGAttt     >  2:2228733/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                 
GAATACCCGAGATCATATGCTGCTTGAGGATTTCTACCGTAATCTGGATCACTTTAAGTGTCGGTTTTTACCCCTTAATTATTAATTTGTGAAATAGATCACCGCTTTGGGATTACTACCAAAAATAGTTGCGCAAACATCTTGAAATTTTGCTAATGACCACAATATAAGCTAAACGCGATTCGCAACCCATTCAGGTAGCCGGGGTTAACCGGCTGCTATTACAGGAGAAACCTTTGCGCTGGTTACCTTTTATTGCCATTTTCCTTTATGTCTATATTGAGATTTCAA  >  CP009273/4358245‑4358535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: