| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,461,317 | G→T | 6.4% | A299E (GCG→GAG) | pyrB ← | aspartate carbamoyltransferase, catalytic subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,461,317 | 0 | G | T | 6.4% | 1213.2 / 33.2 | 318 | A299E (GCG→GAG) | pyrB | aspartate carbamoyltransferase, catalytic subunit |
| Reads supporting (aligned to +/- strand): ref base G (172/125); new base T (17/4); total (189/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.03e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 325 total aligned reads displayed.
CAGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCGAAG > CP009273/4461169‑4461465 | cAGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACg > 1:2549867/1‑149 (MQ=255)cAGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACg > 1:4585453/1‑149 (MQ=255) aGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGc > 2:3391112/1‑149 (MQ=255) gACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGcc > 2:3657779/1‑149 (MQ=255) cTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTg < 1:1244201/149‑1 (MQ=255) cAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgc < 1:4223632/149‑1 (MQ=255) gCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGgcgagcg > 1:3484848/1‑149 (MQ=255) gATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGt < 1:1625932/149‑1 (MQ=255) aTCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGtt > 2:3948404/1‑149 (MQ=255) aTCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGtt > 2:1559187/1‑149 (MQ=255) aTCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGtt < 2:1111859/149‑1 (MQ=255) tGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcc < 1:1084741/149‑1 (MQ=255) tGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcc < 1:4603368/149‑1 (MQ=255) gggCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTtgcct > 1:2046620/1‑149 (MQ=255) gggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGcctgcctg > 2:649693/1‑149 (MQ=255) gggATATGGTCAATTACCGAGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGAACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGcctgcctg > 2:4332208/1‑149 (MQ=255) gggATATGGTCAATGACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGcctgcctg < 2:2664476/149‑1 (MQ=255) ggATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCctgcctgc > 2:3557855/1‑149 (MQ=255) gATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCctgct > 1:1493470/1‑149 (MQ=255) tGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGaa > 2:345348/1‑149 (MQ=255) ggTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAg > 2:1463520/1‑149 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGACGTACCa > 2:4041535/1‑149 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa > 1:957510/1‑149 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa < 1:3235977/149‑1 (MQ=255) aTTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCa > 1:1629751/1‑149 (MQ=255) ttACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAg < 2:1787799/149‑1 (MQ=255) ccGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCg < 1:28953/149‑1 (MQ=255) cGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCgt < 2:2973018/149‑1 (MQ=255) gTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCgtg < 2:3146997/149‑1 (MQ=255) tGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCgtgt < 1:2975249/149‑1 (MQ=255) gCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGtgtg < 1:1378403/149‑1 (MQ=255) gcgTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCg > 2:2007220/1‑149 (MQ=255) gTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGtt < 1:4079602/149‑1 (MQ=255) gTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGtt > 1:4139145/1‑149 (MQ=255) tttAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGttt > 1:199296/1‑149 (MQ=255) ttAATAGCTTCAACCTTCAATTTATTATCGTGTGTCATATCTATATCCACATACATTACCATATAGCTAAAAAGAACCAGTTACAGAAAAGCCTGGAGACCGAAAATCCCGTTGCCTGCCTGAAGGAAGTACCAGGCGTGAGGCGtttt > 2:4737948/1‑149 (MQ=255) tAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCa > 2:4265254/1‑149 (MQ=255) ttCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt > 2:2480396/1‑149 (MQ=255) ttCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACAt > 2:3199450/1‑149 (MQ=255) tCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATc > 1:4689059/1‑149 (MQ=255) aaCCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg < 2:4408804/149‑1 (MQ=255) aaCCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCg > 1:1344746/1‑149 (MQ=255) aCCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGt < 2:4361614/149‑1 (MQ=255) cTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCg > 1:2606233/1‑149 (MQ=255) cAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCaa < 1:1813038/149‑1 (MQ=255) aTTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAAtc < 2:2020176/149‑1 (MQ=255) attatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCTGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcat < 2:3281413/149‑1 (MQ=255) attatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcat < 2:4504003/149‑1 (MQ=255) ttatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcatc > 1:3348636/1‑149 (MQ=255) ttatCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCtcatc < 2:2350961/149‑1 (MQ=255) tCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAac > 2:2797970/1‑149 (MQ=255) tCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAac > 2:858083/1‑149 (MQ=255) gtgtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAacac < 1:2267149/149‑1 (MQ=255) tgtgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcg > 1:4267211/1‑149 (MQ=255) tgtCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACAcgcg < 1:3275358/149‑1 (MQ=255) tCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGc > 1:3695973/1‑149 (MQ=255) aTCTCTCTTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAg > 1:1736568/1‑149 (MQ=255) aTCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAg > 1:4405979/1‑149 (MQ=255) aTCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAg > 1:706496/1‑149 (MQ=255) tctcTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGc > 1:3958384/1‑149 (MQ=255) tctATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCgg > 1:4343627/1‑149 (MQ=255) tttCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATgc > 1:2342508/1‑149 (MQ=255) ccTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCAc > 2:2591377/1‑149 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACttt < 2:4691700/149‑1 (MQ=255) tACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACttt > 2:1678571/1‑149 (MQ=255) cAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCa > 2:1660735/1‑149 (MQ=255) aCCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATAtt < 1:1046795/149‑1 (MQ=255) ccAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTg > 2:498958/1‑149 (MQ=255) cAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTgg > 2:1248714/1‑149 (MQ=255) cAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTgg < 2:1917180/149‑1 (MQ=255) aGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGCTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTGTCATATTGGc > 2:4573637/1‑149 (MQ=255) gATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCt < 1:3067966/149‑1 (MQ=255) aTCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCtt > 2:1507420/1‑149 (MQ=255) aTCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCtt < 1:2239057/149‑1 (MQ=255) tCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCttt < 2:1214842/149‑1 (MQ=255) tCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCttt > 1:2463472/1‑149 (MQ=255) tCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCttt > 2:4246461/1‑149 (MQ=255) cgcgATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTg < 2:2506769/149‑1 (MQ=255) gcgATTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTgg > 1:3284512/1‑149 (MQ=255) gcgATTCAGAACCAGTGCCAGTAACGCCTGGCTAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTgg < 2:1352757/149‑1 (MQ=255) aTTCAGAACCAGTGCCAGTAACTCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt > 1:778860/1‑149 (MQ=255) aTTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGt > 2:2272686/1‑149 (MQ=255) ttCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGtt < 1:1159967/149‑1 (MQ=255) cAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgt > 2:66533/1‑149 (MQ=255) aGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg > 2:2408895/1‑149 (MQ=255) aGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg < 2:2326534/149‑1 (MQ=255) aGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg < 2:4139148/149‑1 (MQ=255) aGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTtgtg > 1:3593379/1‑149 (MQ=255) aaCCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGga > 2:761702/1‑149 (MQ=255) cAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGAt > 1:4105310/1‑149 (MQ=255) aGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATc < 1:1659958/149‑1 (MQ=255) gTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCg > 1:914187/1‑149 (MQ=255) ccAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTg < 2:3519183/149‑1 (MQ=255) cAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTgg < 2:1629751/149‑1 (MQ=255) cAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTgg < 2:1406825/149‑1 (MQ=255) cAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTgg < 1:1585222/149‑1 (MQ=255) aaCGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGcgcg > 2:581764/1‑149 (MQ=255) aCGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCga < 2:2144028/149‑1 (MQ=255) aCGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCga > 1:593287/1‑149 (MQ=255) aCGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAAAATCCTTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCga > 1:1856225/1‑149 (MQ=255) | CAGACTCAACAGCTTAAAACCGATCTGGGCGGGGATATGGTCAATTACCGTGCCGCGTTTAATAGCTTCAACCTGCAATTTATTATCGTGTGTCATCTCTATTTCCCCTTACAGTACCAGATCGCGATTCAGAACCAGTGCCAGTAACGCCTGGCGAGCGAAAATCCCGTTGCCTGCCTGCTGGAAGTACCAGGCGTGTGGCGTTTTATCAACATCCGTCGCAATCTCATCAACACGCGGCAGCGGATGCAGCACTTTCATATTGGCTTTGGCGTTGTGGAGATCGCTGGCGCGAAG > CP009273/4461169‑4461465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |