| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,524,337 | G→T | 6.2% | pseudogene (156/246 nt) | yjhZ ← | pseudogene, rimK paralog, C‑terminal fragment |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,524,337 | 0 | G | T | 6.2% | 1190.6 / 29.2 | 312 | pseudogene (156/246 nt) | yjhZ | pseudogene, rimK paralog, C‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base G (155/137); new base T (10/10); total (165/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 331 total aligned reads displayed.
TCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCT > CP009273/4524189‑4524485 | tCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTtgatg > 2:1318345/1‑149 (MQ=255) gCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTATGATGAGt > 2:3209312/1‑149 (MQ=255) cTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTg > 1:1871914/1‑149 (MQ=255) tttCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGaa < 1:3392543/149‑1 (MQ=255) tCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGaaaa > 1:1436901/1‑149 (MQ=255) cccTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGaaaaa > 1:1765476/1‑149 (MQ=255) cTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAAcc > 1:2992430/1‑149 (MQ=255) cGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGAGTCACACCGGCTTTGATGAGTGAAAAACCGtt < 1:2558012/149‑1 (MQ=255) gggAGATTATTCTCCTTTTGTTAAATCCAGAACATACATATGCTCACCCATCTTCGAGGCTTGAAAAATTGAAGCCAATCCTGAGACGTAATTTTTTTGAAAGGGTCTTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTtc > 2:2407056/1‑149 (MQ=255) agaTTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTctct < 2:1524398/149‑1 (MQ=255) attattCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCttt < 2:2360652/149‑1 (MQ=255) ttattCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCtttt < 1:4277535/149‑1 (MQ=255) attCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTAt < 2:4376373/149‑1 (MQ=255) tctcCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTc < 2:3787101/149‑1 (MQ=255) ccTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGt < 1:4619287/149‑1 (MQ=255) ccTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGt < 2:1884830/149‑1 (MQ=255) ccTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACAGTTCTCTTTTATTCAGt > 2:3874248/1‑149 (MQ=255) cTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTc < 1:4649277/149‑1 (MQ=255) ttttGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCa > 1:1266666/1‑149 (MQ=255) tttGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCaa < 1:4379337/149‑1 (MQ=255) ttAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGt < 1:4529547/149‑1 (MQ=255) aaaTCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTgg < 2:1198604/149‑1 (MQ=255) aaTCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGc < 1:415611/149‑1 (MQ=255) aaTCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGc < 1:234008/149‑1 (MQ=255) aTCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCg > 1:4777450/1‑149 (MQ=255) aTCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCg > 2:3097720/1‑149 (MQ=255) cAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCTTGGCGGTa > 2:2544970/1‑149 (MQ=255) cAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTa > 2:2892056/1‑149 (MQ=255) aGAACATAAAGATGCTCACCCATCTTCGATGCCTGAAAAATTGAAGCCAATCCTGATAAGTAATGTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTaa < 2:3420596/149‑1 (MQ=255) cATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGc > 2:176824/1‑149 (MQ=255) cATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGc < 1:100447/149‑1 (MQ=255) tAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCtt > 2:3057222/1‑149 (MQ=255) tatGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAAt > 1:590678/1‑149 (MQ=255) atGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAAtt < 1:2933787/149‑1 (MQ=255) cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAGGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCa > 2:3182429/1‑149 (MQ=255) cTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCa < 1:3455900/149‑1 (MQ=255) tCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCat > 1:2223854/1‑149 (MQ=255) tCACCCATCTTCGAGGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCat < 1:3879672/149‑1 (MQ=255) ccATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATcc < 1:663007/149‑1 (MQ=255) aTCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTCATTGCTTCAATTGCATATCCCt > 2:680696/1‑149 (MQ=255) tCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTg > 1:3596687/1‑149 (MQ=255) gATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAg > 1:109060/1‑149 (MQ=255) tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCa < 1:2452788/149‑1 (MQ=255) tGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCa > 2:4264885/1‑149 (MQ=255) gCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCAt < 2:1071573/149‑1 (MQ=255) gAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGc < 2:595267/149‑1 (MQ=255) aaaTTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCggg < 1:337313/149‑1 (MQ=255) ttGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACt > 2:2743477/1‑149 (MQ=255) gCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATgg < 2:4646441/149‑1 (MQ=255) cAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGta > 2:3514748/1‑149 (MQ=255) aaTCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGtat > 1:2754471/1‑149 (MQ=255) aTCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGtata > 1:2024897/1‑149 (MQ=255) tCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAg > 1:3503131/1‑149 (MQ=255) cTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGcc < 2:3942135/149‑1 (MQ=255) cTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGcc < 2:2663723/149‑1 (MQ=255) tGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCg > 1:1312054/1‑149 (MQ=255) tAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGc > 2:1630286/1‑149 (MQ=255) tAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGc < 1:413928/149‑1 (MQ=255) tAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGc < 2:1528213/149‑1 (MQ=255) tAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGc > 2:4538807/1‑149 (MQ=255) aaGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGcc < 2:3566281/149‑1 (MQ=255) aaGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGcc > 2:1505799/1‑149 (MQ=255) aaGTAATTTTTTTGAAAGGGTATTTTCCGGAGTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGcc < 2:4222084/149‑1 (MQ=255) gTAATTTTTTTGAAAGGGTATTTTCCGGATTAACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCaa < 2:3279021/149‑1 (MQ=255) aaTTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCaaaa < 1:3978498/149‑1 (MQ=255) ttttttGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAacac < 2:3633327/149‑1 (MQ=255) tttttGATAGTGTATTTTCCGGATTGTCTCCGGCTTTGAGGAGTGAAATTCCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATTAGCGGGACTGAGGGTATAGCCGAGCCAAAAcaca < 2:2045111/149‑1 (MQ=255) ttttGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACAt > 1:1440799/1‑149 (MQ=255) tttGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATc < 2:1401586/149‑1 (MQ=255) tttGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATc > 1:379218/1‑149 (MQ=255) aaaGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCAt > 1:797391/1‑149 (MQ=255) aaGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCAtt > 1:1920400/1‑149 (MQ=255) aGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTg > 1:2278201/1‑149 (MQ=255) gggTATTTTCCGGATTCACACCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGc < 1:2593582/149‑1 (MQ=255) ggTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCt > 2:4627959/1‑149 (MQ=255) tATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTGTATTCAGTCAATAGTTGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATAGCTGa > 2:696978/1‑149 (MQ=255) aTTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCCTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGAc < 2:3345139/149‑1 (MQ=255) ttCCGGATTCACACCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTa > 1:3183104/1‑149 (MQ=255) ttCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTa > 2:4667326/1‑149 (MQ=255) ttCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTa > 2:2762585/1‑149 (MQ=255) ccGGATTCACACCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTaaa < 1:3669218/149‑1 (MQ=255) cGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAAt > 1:53810/1‑149 (MQ=255) aTTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGa > 1:4720961/1‑149 (MQ=255) aTTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGa > 2:2823359/1‑149 (MQ=255) aTTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGa > 2:124945/1‑149 (MQ=255) ttCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGat > 2:296783/1‑149 (MQ=255) acacCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATc > 2:1951615/1‑149 (MQ=255) cacCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCa < 2:1703562/149‑1 (MQ=255) acCGGCTTTGATTAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCAc < 2:908624/149‑1 (MQ=255) acCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCAc > 1:3895895/1‑149 (MQ=255) ggCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCaa < 2:4057974/149‑1 (MQ=255) ggCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCaa > 2:801691/1‑149 (MQ=255) ggCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCaa < 2:4777450/149‑1 (MQ=255) ggCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCaa > 2:4477676/1‑149 (MQ=255) gCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAAt > 2:93771/1‑149 (MQ=255) tttGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCa > 1:2040147/1‑149 (MQ=255) tgatgaGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCaaa < 2:1312544/149‑1 (MQ=255) tgaGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAAcc > 2:2180074/1‑149 (MQ=255) tgaGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAAcc > 1:2830189/1‑149 (MQ=255) gaGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCt > 1:1518397/1‑149 (MQ=255) | TCGGCTTTTCCCTTCGGGAGATTATTCTCCTTTTGTTAAATCCAGAACATAAATATGCTCACCCATCTTCGATGCTTGAAAAATTGAAGCCAATCCTGATAAGTAATTTTTTTGAAAGGGTATTTTCCGGATTCACACCGGCTTTGATGAGTGAAAAACCGTTCTCTTTTATTCAGTCAATCGTGGCGGTAATTGCTTCAATTGCATATCCCTGGCGAGCATAAGCGGGACTGATGGTATAGCCGAGCCAAAACACATCGCATTGCTGACGTAAATAGATATCACCAATCAAAACCT > CP009273/4524189‑4524485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |