Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 4,586,896 C→A 7.9% intergenic (+67/+71) yjjN → / ← opgB L‑galactonate oxidoreductase/phosphoglycerol transferases I and II

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092734,586,8960CA 7.9% 998.8 / 41.9 291intergenic (+67/+71)yjjN/opgBL‑galactonate oxidoreductase/phosphoglycerol transferases I and II
Reads supporting (aligned to +/- strand):  ref base C (122/146);  new base A (9/14);  total (131/160)
Fisher's exact test for biased strand distribution p-value = 6.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-01

Only 100 of 296 total aligned reads displayed.

TCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGATATT  >  CP009273/4586748‑4587041
                                                                                                                                                    |                                                                                                                                                 
tCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTc                                                                                                                                                   >  1:4681508/1‑149 (MQ=255)
tCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGAGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTc                                                                                                                                                   >  1:3352644/1‑149 (MQ=255)
 ccGTTCGCCACGCTGGCAGAAACCTACTAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCt                                                                                                                                                  <  2:212254/149‑1 (MQ=255)
  cGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCtt                                                                                                                                                 >  1:4038342/1‑149 (MQ=255)
    ttCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTtaa                                                                                                                                               <  2:1145729/149‑1 (MQ=255)
    ttCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGGGTTGGGCGCTGTTTTTTTTGTTTCTtaa                                                                                                                                               >  2:3105615/1‑149 (MQ=255)
        ccACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTaataat                                                                                                                                           <  2:3395326/149‑1 (MQ=255)
        ccACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTaataat                                                                                                                                           <  2:1789315/149‑1 (MQ=255)
           cGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAAtgtg                                                                                                                                        <  1:4618092/149‑1 (MQ=255)
              tGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGtgttg                                                                                                                                     <  2:1883464/149‑1 (MQ=255)
                gCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTa                                                                                                                                   <  1:1131139/149‑1 (MQ=255)
                 cAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTaa                                                                                                                                  <  1:865187/149‑1 (MQ=255)
                     aaCCTAGGAGCGCGATGTGATTAACAATCGTGAGTTAAGTATAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGGTGGGCGCTGTTTTGTGTGTTTCTTAATCATGTGTTGTAAGCCg                                                                                                                              >  2:3413810/1‑149 (MQ=255)
                     aaCCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCg                                                                                                                              >  2:1092779/1‑149 (MQ=255)
                       ccTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTa                                                                                                                            <  2:3612590/149‑1 (MQ=255)
                       ccTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTa                                                                                                                            <  2:2899323/149‑1 (MQ=255)
                        cTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTATTAATAATGTGTTGTAAGCCGTAg                                                                                                                           <  1:1712147/149‑1 (MQ=255)
                          aCGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGaa                                                                                                                         <  1:3412370/149‑1 (MQ=255)
                           cGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAg                                                                                                                        >  2:3478128/1‑149 (MQ=255)
                           cGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAg                                                                                                                        <  1:4069755/149‑1 (MQ=255)
                            gAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGACGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAgg                                                                                                                       >  1:559905/1‑149 (MQ=255)
                              gcgcGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCg                                                                                                                     <  1:4182591/149‑1 (MQ=255)
                               cgcgATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCgt                                                                                                                    <  2:1836978/149‑1 (MQ=255)
                                gcgATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCgtg                                                                                                                   >  1:2959259/1‑149 (MQ=255)
                                 cgATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCgtgt                                                                                                                  <  1:1192245/149‑1 (MQ=255)
                                   aTGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAACAATGTGTTGTAAGCCGTAGAAGGCGTGTAg                                                                                                                >  1:710064/1‑149 (MQ=255)
                                     gtgATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGt                                                                                                              <  1:3410492/149‑1 (MQ=255)
                                      tgATTAACACTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTc                                                                                                             <  1:4520450/149‑1 (MQ=255)
                                       gATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCg                                                                                                            >  1:903230/1‑149 (MQ=255)
                                         ttAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGACGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCa                                                                                                          >  2:3156992/1‑149 (MQ=255)
                                          tAACAATCGTGAGTTAATTAACGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCAc                                                                                                         <  1:4367112/149‑1 (MQ=255)
                                          tAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTATTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCAc                                                                                                         >  2:346263/1‑149 (MQ=255)
                                           aaCAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCAcc                                                                                                        >  1:4570018/1‑149 (MQ=255)
                                           aaCAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCAcc                                                                                                        >  1:2844949/1‑149 (MQ=255)
                                             cAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCt                                                                                                      >  1:947475/1‑149 (MQ=255)
                                               aTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                                                    <  1:279871/149‑1 (MQ=255)
                                               aTCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTAt                                                                                                    <  2:4318353/149‑1 (MQ=255)
                                                 cGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTATTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGc                                                                                                  <  1:1019094/149‑1 (MQ=255)
                                                     aGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGAcc                                                                                              >  2:800875/1‑149 (MQ=255)
                                                      gTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTTTAAGCCGTAGAAGGCGTGTATGTCGCACCCTATGCGACCt                                                                                             >  2:2727985/1‑149 (MQ=255)
                                                      gTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCt                                                                                             >  2:2049032/1‑149 (MQ=255)
                                                        taattaaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTac                                                                                           >  1:2352184/1‑149 (MQ=255)
                                                         aattaaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTaca                                                                                          <  2:2693518/149‑1 (MQ=255)
                                                         aattaaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTaca                                                                                          >  2:2511420/1‑149 (MQ=255)
                                                         aattaaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTaca                                                                                          <  2:3777474/149‑1 (MQ=255)
                                                          attaaAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTacac                                                                                         >  1:2419630/1‑149 (MQ=255)
                                                             aaaGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtc                                                                                      <  1:3928951/149‑1 (MQ=255)
                                                              aaGGCGTAATTACTTTCTGATACGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATACTGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtca                                                                                     <  2:4484211/149‑1 (MQ=255)
                                                              aaGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtca                                                                                     <  2:3875604/149‑1 (MQ=255)
                                                                 gCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtcagtc                                                                                  <  2:1363025/149‑1 (MQ=255)
                                                                   gTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAtcagtcag                                                                                <  1:2304718/149‑1 (MQ=255)
                                                                     aaTTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGa                                                                              <  2:3204931/149‑1 (MQ=255)
                                                                       ttACTTTCTGATAATGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACAGCAGTCAGGAAt                                                                            >  2:4617077/1‑149 (MQ=255)
                                                                       ttACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCGATGCGACCAACACAACAGTCAGGAAt                                                                            >  1:2048710/1‑149 (MQ=255)
                                                                       ttACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTATTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAAt                                                                            <  2:3919346/149‑1 (MQ=255)
                                                                              cTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCtt                                                                     <  1:2776456/149‑1 (MQ=255)
                                                                                   aaGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGt                                                                >  1:4290950/1‑149 (MQ=255)
                                                                                   aaGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGt                                                                >  2:4654369/1‑149 (MQ=255)
                                                                                   aaGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGt                                                                >  1:1900519/1‑149 (MQ=255)
                                                                                         agaTTATTAAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTAcc                                                          <  1:2780290/149‑1 (MQ=255)
                                                                                          gaTTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCa                                                         >  2:1291723/1‑149 (MQ=255)
                                                                                            ttattaAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACt                                                       <  1:732043/149‑1 (MQ=255)
                                                                                             tattaAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACtt                                                      <  1:291920/149‑1 (MQ=255)
                                                                                              attaAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACttt                                                     <  1:1798258/149‑1 (MQ=255)
                                                                                              attaAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACttt                                                     <  2:457526/149‑1 (MQ=255)
                                                                                               ttaAAGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTa                                                    >  2:4257605/1‑149 (MQ=255)
                                                                                               ttaAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTa                                                    >  2:2824302/1‑149 (MQ=255)
                                                                                                taAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTaa                                                   >  1:3051025/1‑149 (MQ=255)
                                                                                                 aaaGTTGCCATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCAATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACATTAAt                                                  >  1:4536573/1‑149 (MQ=255)
                                                                                                       gCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTccac                                            <  1:3855086/149‑1 (MQ=255)
                                                                                                        ccATGCAGCTTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTccacc                                           <  1:44351/149‑1 (MQ=255)
                                                                                                         cATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTccacca                                          >  2:2349636/1‑149 (MQ=255)
                                                                                                            gCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGc                                       <  2:2933398/149‑1 (MQ=255)
                                                                                                              aGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCg                                     <  2:3352672/149‑1 (MQ=255)
                                                                                                              aGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCg                                     <  2:4003500/149‑1 (MQ=255)
                                                                                                               gCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAATGCGTGTAGGTCGCACCCTAAGCGACCTACACATCAGTCAGGAATTAACCTTCACGTTATAACACTTTAATTTCCACCAATCCGa                                    >  1:913519/1‑149 (MQ=255)
                                                                                                               gCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGa                                    <  1:1711289/149‑1 (MQ=255)
                                                                                                               gCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCAATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGa                                    >  1:573572/1‑149 (MQ=255)
                                                                                                                 gTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATc                                  >  2:217309/1‑149 (MQ=255)
                                                                                                                  tCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATcc                                 >  2:2306207/1‑149 (MQ=255)
                                                                                                                  tCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATcc                                 <  2:3988575/149‑1 (MQ=255)
                                                                                                                      gggAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAg                             >  2:885807/1‑149 (MQ=255)
                                                                                                                      gggAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAg                             <  1:1206455/149‑1 (MQ=255)
                                                                                                                      gggAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGAGTGTAGGTCGCACCCTATGAGACCTACACATCAGTAAGGAATTACACTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAg                             >  2:2678311/1‑149 (MQ=255)
                                                                                                                       ggAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGc                            <  1:4770343/149‑1 (MQ=255)
                                                                                                                       ggAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGc                            <  1:152754/149‑1 (MQ=255)
                                                                                                                        gAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTAACGTTCTACCACTTTAATTTACACCATGCCGATCCCGAGCt                           >  1:3052036/1‑149 (MQ=255)
                                                                                                                           gtgtTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTAc                        <  1:1664640/149‑1 (MQ=255)
                                                                                                                                gggCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACgcggc                   <  2:2953103/149‑1 (MQ=255)
                                                                                                                                   cgcTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAg                <  2:489256/149‑1 (MQ=255)
                                                                                                                                    gcTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGTGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAgt               >  1:317575/1‑149 (MQ=255)
                                                                                                                                    gcTGTTTTATTTGTTTCTGAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAgt               <  2:1533627/149‑1 (MQ=255)
                                                                                                                                      tGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGTTCGCACCCAATGCGACCTACACATCAGTCAGGAATTACCCTTCAAGTTCTACCACTTTAATTTCCACCATTCCGATCCCGAGCATACGCGGCGAgtgt             >  1:1411253/1‑149 (MQ=255)
                                                                                                                                        ttttttttGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTcc           >  1:3754271/1‑149 (MQ=255)
                                                                                                                                           tttttGTTTATTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAg        <  2:3743893/149‑1 (MQ=255)
                                                                                                                                             tttGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGa      >  1:3588142/1‑149 (MQ=255)
                                                                                                                                                gTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGatat   <  2:434131/149‑1 (MQ=255)
                                                                                                                                                gTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGatat   >  2:1668546/1‑149 (MQ=255)
                                                                                                                                                gTTACTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGatat   <  1:3786920/149‑1 (MQ=255)
                                                                                                                                                 tttCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGATAtt  >  2:63430/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
TCCGTTCGCCACGCTGGCAGAAACCTACGAGCGCGATGTGATTAACAATCGTGAGTTAATTAAAGGCGTAATTACTTTCTGATAAGGCGAGATTATTAAAGTTGCCATGCAGCGTCCGGGGAAGTGTTGGGCGCTGTTTTTTTTGTTTCTTAATAATGTGTTGTAAGCCGTAGAAGGCGTGTAGGTCGCACCCTATGCGACCTACACATCAGTCAGGAATTACCCTTCACGTTCTACCACTTTAATTTCCACCATGCCGATCCCGAGCTTACGCGGCGAGTGTCCGAGGATATT  >  CP009273/4586748‑4587041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: