| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 409,615 | A→G | 7.2% | L532S (TTA→TCA) | sbcC ← | exonuclease, dsDNA, ATP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 409,615 | 0 | A | G | 7.2% | 861.2 / 44.0 | 263 | L532S (TTA→TCA) | sbcC | exonuclease, dsDNA, ATP‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (124/120); new base G (11/8); total (135/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.37e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 273 total aligned reads displayed.
CCATTGTTGAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCAAAT > CP009273/409467‑409763 | cATTGTTGAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTaa < 1:911554/149‑1 (MQ=255) aTTGTTGAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAAt > 1:4075953/1‑149 (MQ=255) gttgAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCga > 1:324104/1‑149 (MQ=255) gAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGAc > 2:3459000/1‑149 (MQ=255) gAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGAc < 2:1701359/149‑1 (MQ=255) aGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACt < 2:510941/149‑1 (MQ=255) gTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTg > 2:4031631/1‑149 (MQ=255) aaGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGAt < 1:2682168/149‑1 (MQ=255) aGTGCTTGCTCATCTTGTCTGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGAtt > 1:2453033/1‑149 (MQ=255) aGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGAtt > 1:1362585/1‑149 (MQ=255) ttgctCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGc < 2:489300/149‑1 (MQ=255) tgctCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGcc > 2:3706267/1‑149 (MQ=255) tgctCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGcc < 1:50003/149‑1 (MQ=255) tCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAgg > 2:2972149/1‑149 (MQ=255) aTCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCt > 2:2113637/1‑149 (MQ=255) cTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTcc < 2:1757577/149‑1 (MQ=255) tGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTACAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAg > 2:4276503/1‑149 (MQ=255) gAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCt < 1:4742446/149‑1 (MQ=255) ggCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCTAGACTGATTAACGCCAGGCTCCAGCGCCTGa > 2:842336/1‑149 (MQ=255) ggCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGa > 2:2047410/1‑149 (MQ=255) ggCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGa < 1:341348/149‑1 (MQ=255) gatttGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTTTGGCGTCCAGTTGCCCACGTAGCGTCTCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGTTTAACGCCAGGCTCCAGAGCCTGAt < 2:3089739/147‑1 (MQ=255) tttGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATAc > 1:3282831/1‑149 (MQ=255) ttCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGa > 1:1093284/1‑149 (MQ=255) tCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGAc > 2:1486462/1‑149 (MQ=255) tCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGAc < 1:1446924/149‑1 (MQ=255) ttttCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGAccgc > 2:2921496/1‑149 (MQ=255) ttCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGAccgccg > 1:4158024/1‑149 (MQ=255) tcatcaCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCgg > 2:1202166/1‑149 (MQ=255) catcaCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCggg < 2:313906/149‑1 (MQ=255) catcaCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCggg < 2:3187182/149‑1 (MQ=255) catcaCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCggg < 1:401461/149‑1 (MQ=255) atcaCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTGATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGt > 1:2152670/1‑149 (MQ=255) atcaCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGt > 1:4468236/1‑149 (MQ=255) aCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGc < 1:3792502/149‑1 (MQ=255) aCGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGc < 2:631473/149‑1 (MQ=255) gCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTGATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCtg < 2:4700280/149‑1 (MQ=255) cTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCtgg > 2:1789753/1‑149 (MQ=255) gAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCtggtg < 1:974573/149‑1 (MQ=255) tgctTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAAcc > 2:378995/1‑149 (MQ=255) ctTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACcac > 1:3251528/1‑149 (MQ=255) ctTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACcac < 1:2988007/149‑1 (MQ=255) ttGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACaa > 2:1625874/1‑149 (MQ=255) gTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAg < 2:2571383/149‑1 (MQ=255) ttATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGt > 2:3980014/1‑149 (MQ=255) tATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTACCTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTg < 1:4789958/149‑1 (MQ=255) aTGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTGATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTgg > 2:3265422/1‑149 (MQ=255) tGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTggg > 1:4163525/1‑149 (MQ=255) tCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACCAAGTGGGCAAgg > 2:4625307/1‑149 (MQ=255) tCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACACAGTGGGCAAgg > 2:2454023/1‑149 (MQ=255) tCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAgg > 2:4625180/1‑149 (MQ=255) aGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTg < 1:1531683/149‑1 (MQ=255) ttGCCCACGTAGCGTCGCACCTTCGTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGAc < 2:2935427/149‑1 (MQ=255) tGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGAcc < 1:1970647/149‑1 (MQ=255) cACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCTCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGcc > 1:1146140/1‑149 (MQ=255) tAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTa > 2:420741/1‑149 (MQ=255) gCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTGATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAAc < 2:41233/149‑1 (MQ=255) gCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAAc > 1:62794/1‑149 (MQ=255) tCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACtgt > 2:4134411/1‑149 (MQ=255) ccTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACg > 2:2061597/1‑149 (MQ=255) cttcttCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGt > 2:2248239/1‑149 (MQ=255) cttcttCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGt < 2:2381349/149‑1 (MQ=255) ttcttcACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGtt > 2:2601082/1‑149 (MQ=255) ttcttcACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGtt > 2:2301607/1‑149 (MQ=255) tcttcACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTg > 2:2517224/1‑149 (MQ=255) tcttcACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTg < 2:928430/149‑1 (MQ=255) cttcACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGa < 1:2916137/149‑1 (MQ=255) tcACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGc > 1:1881890/1‑149 (MQ=255) cACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCt > 1:1137151/1‑149 (MQ=255) cACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCt < 2:2289067/149‑1 (MQ=255) gCTTTTTAACTTCGTTTTCCAGCGCCAGTGATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGc > 1:3875758/1‑149 (MQ=255) tttttAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGt > 1:2382071/1‑149 (MQ=255) ttttAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGtt < 2:3818681/149‑1 (MQ=255) tttAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGttt < 1:2569776/149‑1 (MQ=255) tttAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGttt < 1:3913238/149‑1 (MQ=255) tAACTTCGTTTTCCAGCGCCAGTGATCGAGACTGATGAACGCCAGGCTCCAGCGCCTGATACGCCTCGCCCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTg < 2:1114806/149‑1 (MQ=255) aaCTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGa > 1:1728264/1‑149 (MQ=255) aaCTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGa > 1:4253661/1‑149 (MQ=255) cTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATg < 1:1222827/149‑1 (MQ=255) ttCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATgc > 1:2796277/1‑149 (MQ=255) ttCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATgc < 1:3646062/149‑1 (MQ=255) ttCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATgc > 1:403084/1‑149 (MQ=255) tCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATgcg > 2:4575066/1‑149 (MQ=255) ttttCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATgcgcgc > 2:446107/1‑149 (MQ=255) ttttCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATgcgcgc > 2:3110598/1‑149 (MQ=255) tttCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCt < 1:4733289/149‑1 (MQ=255) ttCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCtt < 1:3145340/149‑1 (MQ=255) cAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCt > 2:1641694/1‑149 (MQ=255) gcgcCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGc < 1:2066199/149‑1 (MQ=255) cgcCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCt < 1:2763574/149‑1 (MQ=255) gcCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTc < 2:4180114/149‑1 (MQ=255) gcCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTc > 2:3297287/1‑149 (MQ=255) gcCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTc > 2:2763600/1‑149 (MQ=255) gTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCaa > 1:52328/1‑149 (MQ=255) tAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCaaa < 1:2605226/149‑1 (MQ=255) tAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCaaa < 1:2522814/149‑1 (MQ=255) tAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCaaa < 1:2343658/149‑1 (MQ=255) tAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCaaa < 1:2234833/149‑1 (MQ=255) aaTCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCAAAt < 1:1805595/149‑1 (MQ=255) aaTCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCAAAt < 2:1362585/149‑1 (MQ=255) | CCATTGTTGAGTAAGTGCTTGCTCATCTTGTCGGAGGCTTTGCGCTTCGTTTTCATCACGCTGAAGCTGCTTTGTTATGGCGTCCAGTTGCCCACGTAGCGTCGCACCTTCTTCACCGAGCTTTTTAACTTCGTTTTCCAGCGCCAGTAATCGAGACTGATTAACGCCAGGCTCCAGCGCCTGATACGCCTCGACCGCCGGGTGGCTGGTGGAACCACAAAGTGGGCAAGGCTGACCCGCCTGTAACTGTGCACGTTGAGCTTCCAGCGTTTTGATGCGCGCTTCCTGCTCGCAAAT > CP009273/409467‑409763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |