| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 458,681 | C→A | 6.8% | I437I (ATC→ATA) | ppiD → | periplasmic folding chaperone, has an inactive PPIase domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 458,681 | 0 | C | A | 6.8% | 964.3 / 25.4 | 268 | I437I (ATC→ATA) | ppiD | periplasmic folding chaperone, has an inactive PPIase domain |
| Reads supporting (aligned to +/- strand): ref base C (140/108); new base A (6/14); total (146/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.36e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 273 total aligned reads displayed.
AGCAGAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGTTA > CP009273/458533‑458829 | agcagAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATc > 2:135210/1‑149 (MQ=255) gAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTa > 2:1604918/1‑149 (MQ=255) gAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTa > 2:1464191/1‑149 (MQ=255) aaGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAAc > 1:3747855/1‑149 (MQ=255) aaGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAAc > 1:1979756/1‑149 (MQ=255) gTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAAcgg < 1:3709279/149‑1 (MQ=255) tGAGCGCTGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAAcggc < 1:47097/149‑1 (MQ=255) cGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTc < 2:2822132/149‑1 (MQ=255) aTGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTg > 1:1331853/1‑149 (MQ=255) aTGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTg > 1:1331536/1‑149 (MQ=255) tGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTgg < 1:4267869/149‑1 (MQ=255) gCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGt < 2:1329904/149‑1 (MQ=255) caagcaaCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGt < 2:4216483/149‑1 (MQ=255) agcaaCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGa > 2:1081377/1‑149 (MQ=255) gcaaCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATATTTAACGGCGGTCTGGTAGGTGaa < 2:2500722/149‑1 (MQ=255) aaCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGaaaa < 2:4588722/149‑1 (MQ=255) aaCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGaaaa > 1:171540/1‑149 (MQ=255) aCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAAc > 2:2213941/1‑149 (MQ=255) aCGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATATTTAACGGCGGTCTGGTAGGTGAAAAc < 2:2219801/149‑1 (MQ=255) cGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACg > 2:307874/1‑149 (MQ=255) gACCCCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGTCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACgg < 2:1272176/149‑1 (MQ=255) gACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACgg > 2:3733707/1‑149 (MQ=255) acacCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGgc < 1:4689723/149‑1 (MQ=255) acacCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGgc > 2:1180982/1‑149 (MQ=255) acacCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGGCTGGTAGGTGAACACGgc > 1:1109428/1‑149 (MQ=255) gAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGcc > 2:3493722/1‑149 (MQ=255) gAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGcc > 2:614021/1‑149 (MQ=255) aGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCg < 2:1917419/149‑1 (MQ=255) aGTCACTGGCCGGGGCTGACCAAGCTCCCGGCGTTAAAGCCACCCAGACGGGTTGGTTCAGAAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCg < 1:1650312/149‑1 (MQ=255) ctGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCAt > 1:2567031/1‑149 (MQ=255) tGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATc > 1:1779377/1‑149 (MQ=255) ccGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAAc < 1:3559358/149‑1 (MQ=255) ggTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAActc > 2:1506098/1‑149 (MQ=255) agagCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGAca < 2:2357673/149‑1 (MQ=255) agagCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGAca > 1:4484459/1‑149 (MQ=255) agaaaGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTTAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGAcatc < 1:656587/146‑1 (MQ=255) gCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCAc < 2:891609/149‑1 (MQ=255) gCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGt < 1:1590205/149‑1 (MQ=255) gCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGt > 1:2756493/1‑149 (MQ=255) tgCGTTAAAGCCACTCAGACGGGTTGGTTCATCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGa < 2:3816448/148‑1 (MQ=255) ggCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGa > 2:4018510/1‑149 (MQ=255) gTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACgg > 1:2621728/1‑149 (MQ=255) gTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACgg > 1:229601/1‑149 (MQ=255) ttAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGc < 1:1949442/149‑1 (MQ=255) aGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGAcc > 1:4426049/1‑149 (MQ=255) cACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACcgcg > 1:4365685/1‑149 (MQ=255) cACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACcgcg > 1:2096281/1‑149 (MQ=255) cAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTATAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCAACACCGTAGACGGCGACCGCGCAtt > 2:560715/1‑149 (MQ=255) cAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATATTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCAtt < 2:4615535/149‑1 (MQ=255) gACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCg > 1:1933005/1‑149 (MQ=255) gACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCg > 1:3246108/1‑149 (MQ=255) gACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCg > 2:1021499/1‑149 (MQ=255) aCGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGTGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTATGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGt < 1:3362827/149‑1 (MQ=255) aCGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATATTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGt < 1:286782/149‑1 (MQ=255) gggTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGtgc < 2:3591748/149‑1 (MQ=255) gggTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGCCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGtgc > 1:310471/1‑149 (MQ=255) ggttggttCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGtgct > 1:3618416/1‑149 (MQ=255) ttCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCAt > 2:2927413/1‑149 (MQ=255) tCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATc < 2:860528/149‑1 (MQ=255) cAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCa < 1:4163894/149‑1 (MQ=255) aGCAAAGATACCCTGCCGGAAGAGTTGAACTTCCAGCCGGTTGCCGACGCGATCTTTACCGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAg < 2:4150407/149‑1 (MQ=255) gCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGc > 1:1532039/1‑149 (MQ=255) aaaGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCACCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGa > 2:317667/1‑149 (MQ=255) aaGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAg > 1:3891300/1‑149 (MQ=255) aaGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAg > 1:1164183/1‑149 (MQ=255) gATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGca > 2:3482295/1‑149 (MQ=255) tAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGcaca > 2:140189/1‑149 (MQ=255) ggAAGAGTTGAACTTCACGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAg < 1:1669483/149‑1 (MQ=255) ggAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAg > 2:3222334/1‑149 (MQ=255) ggAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAg < 2:273898/149‑1 (MQ=255) gAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGc > 1:2956952/1‑149 (MQ=255) gAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGc > 1:4070364/1‑149 (MQ=255) gAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAAc < 1:1002180/149‑1 (MQ=255) gAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAAc < 2:171540/149‑1 (MQ=255) aaCTTCAAGCCGGTTGCCGACGCTATATTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAAcc > 1:1586602/1‑149 (MQ=255) tCAAGCCGGTTGCGGACGCTTTCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTg < 1:890524/149‑1 (MQ=255) tCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTg < 1:700337/149‑1 (MQ=255) tCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTg > 2:3326269/1‑149 (MQ=255) cAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTgg > 1:3976682/1‑149 (MQ=255) ccGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGa < 1:2753947/149‑1 (MQ=255) ccGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGa < 2:3652853/149‑1 (MQ=255) cGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGAt > 1:2858783/1‑149 (MQ=255) ggtGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGt < 2:215523/147‑1 (MQ=255) gTTGCCGCCGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGt < 2:2608833/149‑1 (MQ=255) ttGCCGACGCTATCTTTTACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGtt < 1:3533734/149‑1 (MQ=255) ttGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGtt > 2:3008402/1‑149 (MQ=255) ttGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGtt < 2:771809/149‑1 (MQ=255) tGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTc < 2:166127/149‑1 (MQ=255) tGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGAGAAACCGTTGGCAGATGTTc > 2:4402879/1‑149 (MQ=255) gCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCa < 1:3264487/149‑1 (MQ=255) gACGCTATCTTTAACGGCGGTCTGGTCGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGa > 1:345888/1‑149 (MQ=255) cGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAAc > 2:1212821/1‑149 (MQ=255) gCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACa > 1:2434590/1‑149 (MQ=255) cTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACaa < 1:1604918/149‑1 (MQ=255) cTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACaa < 1:1464768/149‑1 (MQ=255) cTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACaa > 2:2953444/1‑149 (MQ=255) tATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAg > 2:1994449/1‑149 (MQ=255) aTCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGt < 2:2030213/149‑1 (MQ=255) tCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGtt > 2:3840697/1‑149 (MQ=255) tCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGtt > 2:679866/1‑149 (MQ=255) | AGCAGAAAGTGAGCGATGCGGCAAGCAACGACACCGAGTCTCTGGCCGGTGCAGAGCAAGCTGCCGGCGTTAAAGCCACTCAGACGGGTTGGTTCAGCAAAGATAACCTGCCGGAAGAGTTGAACTTCAAGCCGGTTGCCGACGCTATCTTTAACGGCGGTCTGGTAGGTGAAAACGGCGCGCCGGGCATCAACTCTGACATCATCACCGTAGACGGCGACCGCGCATTCGTGCTGCGCATCAGCGAGCACAAACCGGAAGCGGTGAAACCGTTGGCAGATGTTCAGGAACAAGTTA > CP009273/458533‑458829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |