| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,245,056 | A→C | 8.5% | L53R (CTC→CGC) | dhaL ← | dihydroxyacetone kinase, C‑terminal domain |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,245,056 | 0 | A | C | 8.5% | 915.3 / 71.4 | 324 | L53R (CTC→CGC) | dhaL | dihydroxyacetone kinase, C‑terminal domain |
| Reads supporting (aligned to +/- strand): ref base A (140/156); new base C (13/15); total (153/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 326 total aligned reads displayed.
TGTCAGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGTTCTGCT > CP009273/1244908‑1245204 | tgtCAGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGa < 2:4009707/149‑1 (MQ=255) tCAGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATACAGAAGGGACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGt < 2:609448/149‑1 (MQ=255) tCAGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGt > 1:1330461/1‑149 (MQ=255) cAGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGtt < 1:4151133/149‑1 (MQ=255) aGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCTATATCTTTATCTGAGATAGCAGGGAGttt > 1:4675902/1‑149 (MQ=255) aGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGttt > 1:10542/1‑149 (MQ=255) aGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGttt > 2:1200125/1‑149 (MQ=255) aGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGttt > 1:2883487/1‑149 (MQ=255) aGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGttt > 1:2020115/1‑149 (MQ=255) ggCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGtttt > 2:1166450/1‑149 (MQ=255) gCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGttttt > 1:809176/1‑149 (MQ=255) cTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTc < 1:3352187/149‑1 (MQ=255) tttGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTcc > 1:3394896/1‑149 (MQ=255) tGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTccac > 2:4335585/1‑149 (MQ=255) gCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTccacc < 2:2038368/149‑1 (MQ=255) ccGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTccacca > 1:661579/1‑149 (MQ=255) cGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCcaccac < 2:531921/149‑1 (MQ=255) cGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCcaccac < 2:2583764/149‑1 (MQ=255) gTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACt > 2:2208870/1‑149 (MQ=255) cTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGc < 2:3496164/149‑1 (MQ=255) tGGGTCGCCTGTGCGGCGCGGATCAAGAAGGTACCGAACAGCGGACCCCTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAACCCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCt < 2:3394589/149‑1 (MQ=255) gggTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATTAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTa > 2:2100513/1‑149 (MQ=255) gggTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTa > 2:4155708/1‑149 (MQ=255) gggTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTa < 1:2982494/149‑1 (MQ=255) gTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTaaa < 1:994167/149‑1 (MQ=255) tgtgCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCg > 1:41761/1‑149 (MQ=255) gtgCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCgg < 1:2566237/149‑1 (MQ=255) tgCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGt < 1:3211834/149‑1 (MQ=255) tgCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGt < 2:2264658/149‑1 (MQ=255) ggATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATAttt > 2:2395561/1‑149 (MQ=255) aTAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAg > 1:2217783/1‑149 (MQ=255) aaaGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGcc < 1:2750719/149‑1 (MQ=255) aaaGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGcc > 1:272406/1‑149 (MQ=255) aagaagGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGccc > 2:4289315/1‑149 (MQ=255) aagGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTg < 1:1681669/149‑1 (MQ=255) ccGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGc < 2:1901831/149‑1 (MQ=255) aaCAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATc < 2:2878928/149‑1 (MQ=255) aCAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCg < 1:1520604/149‑1 (MQ=255) aGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGcc > 2:1664397/1‑149 (MQ=255) aGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGcc < 1:23707/149‑1 (MQ=255) gCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCa > 2:2359739/1‑149 (MQ=255) cGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCaa < 2:887593/149‑1 (MQ=255) cGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCaa < 2:650506/149‑1 (MQ=255) ggACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAAt > 1:1004587/1‑149 (MQ=255) aCTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTcgc > 2:3477274/1‑149 (MQ=255) tGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGa < 1:3639418/149‑1 (MQ=255) caccacCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATcc < 1:4726280/149‑1 (MQ=255) accaccGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCa > 1:2674631/1‑149 (MQ=255) caccGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGt < 1:3236461/149‑1 (MQ=255) accGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTc < 1:1954054/149‑1 (MQ=255) ccGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTcc > 2:1741288/1‑149 (MQ=255) gACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCgg < 2:4463649/149‑1 (MQ=255) aCGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCTTCGCCAATTTCGCGATCCAGTCCGGt < 2:146200/149‑1 (MQ=255) cGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTa < 1:2851381/149‑1 (MQ=255) gCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTaa < 2:2144879/149‑1 (MQ=255) tGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGa > 1:3322917/1‑149 (MQ=255) ggAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGAt > 2:263500/1‑149 (MQ=255) ggAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGAt > 2:2804848/1‑149 (MQ=255) ggAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGAt < 2:539316/149‑1 (MQ=255) aaaGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATAc > 2:422573/1‑149 (MQ=255) gTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTCTCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCtctc < 2:3203567/149‑1 (MQ=255) gTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCtctc < 1:865943/149‑1 (MQ=255) gTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCtctc > 2:2026882/1‑149 (MQ=255) gTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCtctc < 1:1832024/149‑1 (MQ=255) tCATACCGGTAGTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCg < 1:468847/149‑1 (MQ=255) aTACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGt > 2:4625194/1‑149 (MQ=255) aTACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGt < 2:1340367/149‑1 (MQ=255) tACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTg > 1:1274273/1‑149 (MQ=255) aCCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGc < 2:199576/149‑1 (MQ=255) ttCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAat > 1:4006189/1‑149 (MQ=255) ttCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAat > 2:4709641/1‑149 (MQ=255) ttGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATc > 1:1178707/1‑149 (MQ=255) gagaATGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGc < 2:3277534/149‑1 (MQ=255) agaATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGcc < 1:4136347/149‑1 (MQ=255) gaATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCca < 1:2419949/149‑1 (MQ=255) aaTGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCcac > 2:795414/1‑149 (MQ=255) tGAAACCGATATCTTTATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACaa > 1:1067046/1‑149 (MQ=255) aCCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAg > 1:2296989/1‑149 (MQ=255) aCCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAg > 1:227377/1‑149 (MQ=255) ccGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGt > 2:3088001/1‑149 (MQ=255) ccGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGt < 2:3824335/149‑1 (MQ=255) gATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGa > 2:2611495/1‑149 (MQ=255) atCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGcc < 2:3050334/149‑1 (MQ=255) cTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAg < 1:4471936/149‑1 (MQ=255) tttATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGt < 1:4753483/149‑1 (MQ=255) tATCTGCGATAGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGGGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTa > 2:2997817/1‑149 (MQ=255) tATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTa > 1:3895117/1‑149 (MQ=255) aTCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTACGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTaa > 2:3375706/1‑149 (MQ=255) tCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAAc < 2:1527146/149‑1 (MQ=255) gATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAAttt > 1:1958886/1‑149 (MQ=255) aTAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTg < 1:3913968/149‑1 (MQ=255) aGCAGGGCGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAg < 1:4335585/149‑1 (MQ=255) aGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAg < 1:3727688/149‑1 (MQ=255) gCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGt < 1:4528901/149‑1 (MQ=255) gCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGt < 2:4776431/149‑1 (MQ=255) gCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGt < 1:2130351/149‑1 (MQ=255) gggAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGTTCt > 1:4102140/1‑149 (MQ=255) gggAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGTTCt < 2:1290633/149‑1 (MQ=255) gAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGTTCTGc < 2:4377774/149‑1 (MQ=255) gAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGTTCTGc < 2:1921759/149‑1 (MQ=255) | TGTCAGGCTTTGCCGTGCCTGGGTCGCCTGTGCGGCGCGGATAAAGAAGGTACCGAACAGCGGACCACTGGCACCACCGACGCTGGAAAGCAGCGTCATACCGGTATTCTTGAGAATGAAACCGATATCTTTATCTGCGATAGCAGGGAGTTTTTCCACCACTTTGCTAAAGCCTCGGTTCATATTTAGCCCGTGGTCAGCATCGCCAATTTCGCGATCCAGTCCGGTAAGATACTCGCTCTCGGTGCTGAAAATATCGCCACAACGAGTGAGCCAGTTAACAATTTGAGTTCTGCT > CP009273/1244908‑1245204 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |