| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,356,842 | G→T | 25.6% | intergenic (+117/‑158) | puuR → / → puuC | repressor for the divergent puu operons, putrescine inducible/gamma‑glutamyl‑gamma‑aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,356,842 | 0 | G | T | 25.6% | 752.9 / 200.0 | 336 | intergenic (+117/‑158) | puuR/puuC | repressor for the divergent puu operons, putrescine inducible/gamma‑glutamyl‑gamma‑aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (146/103); new base T (38/49); total (184/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.77e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 339 total aligned reads displayed.
TTATCAGCGCCCATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAGACGTGAAACA > CP009273/1356694‑1356990 | gcgcCCATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCgg > 1:2832798/1‑149 (MQ=255) gcCCATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCgggg > 2:530100/1‑149 (MQ=255) gcCCATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCgggg < 1:3753630/149‑1 (MQ=255) gcCCATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCgggg > 1:2522531/1‑149 (MQ=255) ccATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGa > 2:4116796/1‑149 (MQ=255) cATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAg > 2:276364/1‑149 (MQ=255) tACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCg > 2:3789905/1‑149 (MQ=255) gCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAAc < 2:3738364/149‑1 (MQ=255) ccaccaCGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGc > 2:2259196/1‑149 (MQ=255) ccaccaCGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGc > 2:1197590/1‑149 (MQ=255) accacGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAg > 1:3364875/1‑149 (MQ=255) cacGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGcc > 2:668740/1‑149 (MQ=255) cacGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGcc > 2:1878414/1‑149 (MQ=255) cGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCaa > 1:1210892/1‑149 (MQ=255) gTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAg < 2:2073827/149‑1 (MQ=255) tttAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGc > 2:1459199/1‑149 (MQ=255) ttAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCa > 1:1374839/1‑149 (MQ=255) tCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAgg > 1:4116678/1‑149 (MQ=255) ttGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCt < 1:1448293/149‑1 (MQ=255) gTTCTGTAAGCGGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTg < 1:3015975/149‑1 (MQ=255) gTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTg > 2:2582428/1‑149 (MQ=255) tGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAgg < 1:3183419/149‑1 (MQ=255) gTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGa > 2:3055711/1‑149 (MQ=255) gTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGa > 1:593186/1‑149 (MQ=255) gTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGa > 2:3536893/1‑149 (MQ=255) aGCGGGGTAAGCGCAATGCGCCCGGCATTATATACACAAAATCATTCATGTTGCATCAAGGCGGCATGTGTGCGAATCCCGATGAGCTTACTCTGGTAAGTGATTCGGGGGCGCGACCGCAGCCAAGGCAGAGGCGGCTTGAAGGATGa < 1:383192/149‑1 (MQ=255) aGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGa > 1:410789/1‑149 (MQ=255) aGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGa > 1:1118802/1‑149 (MQ=255) gCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGaa > 2:3184516/1‑149 (MQ=255) cGGGTAAGCGCAATGCGCCCGGAAATCTATAAACAAAATCATACAAGTTCCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTTTTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAgt < 2:891055/149‑1 (MQ=38) gggTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAgtg > 2:2843438/1‑149 (MQ=255) ggTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAgtgt > 1:2373255/1‑149 (MQ=255) tAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGtat > 2:4548607/1‑149 (MQ=255) aaGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGtata < 2:1884854/149‑1 (MQ=255) aGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGtatat > 2:601498/1‑149 (MQ=255) gcgcAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGtatata < 1:3077822/149‑1 (MQ=255) gcgcAAGGCGCCCGGCAATCTATACACAAAATAATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGAGGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGtatata < 1:1083744/149‑1 (MQ=255) cgcACTGCGCCCGCAAATCTAAACACAAAATCATTAAAGTTGCATCAAGGCGGCACGTGTGCGAATCCCGATGCGCTTACTCAGGTAATTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATaa < 1:243480/149‑1 (MQ=255) gcAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATaaa < 2:3569292/149‑1 (MQ=255) gcAATGCGCCCGGAAATCTAAACACAAAATCATCCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGCGCTTACTCAGGTAAGTGTTTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATaaa < 1:1019919/149‑1 (MQ=37) gcAAGGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATaaa < 1:1827140/149‑1 (MQ=255) tGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAAt < 1:4218771/149‑1 (MQ=255) cgcCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGt < 1:449888/149‑1 (MQ=255) gcCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTc < 1:4641050/149‑1 (MQ=255) cGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGcc < 1:3997461/149‑1 (MQ=255) cGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGcc > 1:4609080/1‑149 (MQ=255) gCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAg < 2:178410/149‑1 (MQ=255) gCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAg > 2:2158266/1‑149 (MQ=255) gCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAg < 2:3884000/149‑1 (MQ=255) aaTCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGaa > 2:3322582/1‑149 (MQ=255) aaTCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGaa > 1:1531652/1‑149 (MQ=255) aTCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGaaa < 1:3246934/149‑1 (MQ=255) aTCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGaaa > 2:524059/1‑149 (MQ=255) tCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAAt < 2:4137869/149‑1 (MQ=255) cacaAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCTAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACgg < 1:1643684/149‑1 (MQ=255) cacaAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACgg > 1:3591301/1‑149 (MQ=255) cacaAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACgg < 2:2317899/149‑1 (MQ=255) acaAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACggg < 2:798776/149‑1 (MQ=255) aaaaTCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCa > 1:1586727/1‑149 (MQ=255) aaTCTTTCAATTTTCATCATGGCGGAATGTGAGCTAATCCCGTTTATATTACTCAGTTACGTTTTTGGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATa < 1:853297/149‑1 (MQ=255) aaTCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATa > 1:1733756/1‑149 (MQ=255) aaTCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATa > 2:4717220/1‑149 (MQ=255) aaTCATTCAAGTTGCATCAAGGCGGCAAGCGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATa > 1:4356716/1‑149 (MQ=255) tCATTCAAGTTGCATCACGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACg < 2:2478593/149‑1 (MQ=255) tCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACg > 2:4296724/1‑149 (MQ=255) cATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACgg > 1:3912017/1‑149 (MQ=255) aTTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGc > 2:2659741/1‑149 (MQ=255) aTTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGc > 1:4454608/1‑149 (MQ=255) tCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAACCGGGCAGACGGccc < 2:2716444/149‑1 (MQ=255) ttgTTGAAGCATGGCGGCATGTGCGCGATGCCCTATGAGCTTACTCTGTTAATTTTTTCGGGGGAGCTACCGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCgg < 1:2956505/147‑1 (MQ=255) aaGTTGCATCACGGCGGCAAGTGAGCGAAGCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCgg < 1:1897247/149‑1 (MQ=255) aaGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCgg < 2:1730744/149‑1 (MQ=255) aaGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCgg < 2:4619805/149‑1 (MQ=255) aGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTAGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCggg > 2:3770489/1‑149 (MQ=255) ttGCATCATGGCGGCTTGTGTGCGAATCCCGATGAGCTTACTCCGGTAAGTTATTCGGGGGCGCTAACGCCGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGa < 1:2159007/149‑1 (MQ=255) aTCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGAtctc > 2:4238252/1‑149 (MQ=255) aaGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTgc > 2:142738/1‑149 (MQ=255) aGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTgcg > 2:1613601/1‑149 (MQ=255) aGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTgcg > 2:1556458/1‑149 (MQ=255) cggcAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGccc < 2:369597/149‑1 (MQ=255) ggcAAGTGAGCGCATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCt < 2:1383298/149‑1 (MQ=255) gcAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTg > 2:3875127/1‑149 (MQ=255) aaGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGAc > 1:4101363/1‑149 (MQ=255) gTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGt > 1:808997/1‑149 (MQ=255) gAGCGAATCCCGTTGAGCTTACTCTGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTc < 1:2033171/149‑1 (MQ=255) gCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTcac > 1:720431/1‑149 (MQ=255) aaTCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACaaa < 2:1344831/149‑1 (MQ=255) tCCCGATGAGCTTACTCAGGTAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACt < 2:109234/149‑1 (MQ=255) gATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCat < 1:3633733/149‑1 (MQ=255) aTGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCata > 2:1325825/1‑149 (MQ=255) tGAGCTTACTCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCctat > 2:1670911/1‑149 (MQ=255) ttACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTg > 2:954955/1‑149 (MQ=255) aCTCAGGTAAGTTCTTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGAt < 1:2683372/149‑1 (MQ=255) cTCAGGTATGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATa < 1:4548607/149‑1 (MQ=255) cTCAGGTAAGTGATTGGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATa < 1:3343072/149‑1 (MQ=255) tCAGGTAAGTGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAg < 1:519182/149‑1 (MQ=255) gttAAGTGTTTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAGACg < 1:996833/147‑1 (MQ=255) tAAGTTATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAGACGTg > 2:739665/1‑149 (MQ=255) tGATTCGGGGGAGCTAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAGACGTGAAAc < 1:423986/149‑1 (MQ=255) gATTGGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAGACGTGAAACa < 1:4065946/149‑1 (MQ=255) | TTATCAGCGCCCATACGCCCACCACGTTTTAATCTTTTTGTTCTGTAAGCCGGGTAAGCGCAATGCGCCCGGCAATCTATACACAAAATCATTCAAGTTGCATCAAGGCGGCAAGTGAGCGAATCCCGATGAGCTTACTCAGGTAAGTGATTCGGGGGAGCGAACGCAGCCAAGGCAGAGGCGGCTTGAAGGATGAAGTGTATATAAAGAATGTCGCCAGAAATAAACGGGCATACGGCCCGGGGATCTCTGCGCCCTGACGTTCACAAACTGCATATATCTGATAGACGTGAAACA > CP009273/1356694‑1356990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |