| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,512,325 | G→T | 31.3% | I88I (ATC→ATA) | ydcZ ← | DUF606 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,512,325 | 0 | G | T | 31.3% | 637.6 / 272.8 | 349 | I88I (ATC→ATA) | ydcZ | DUF606 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base G (128/111); new base T (41/69); total (169/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.60e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 354 total aligned reads displayed.
CAAGTAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGTTCAGCA > CP009273/1512177‑1512473 | caAGTAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATCTCCGCTg > 2:3265945/1‑149 (MQ=255) aGTAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGAt > 2:1341768/1‑149 (MQ=255) aGTAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGAt < 1:1620695/149‑1 (MQ=255) tAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATAc < 2:457825/149‑1 (MQ=255) aaaaTTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACt < 1:2220975/149‑1 (MQ=255) aaTTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTgg < 2:92216/149‑1 (MQ=255) gcCACAATTTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGa < 1:4483310/149‑1 (MQ=255) gcCACAAATAGGGCCGACCCACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCGGATATCCGCTGATACTGGCGAAGa < 1:232207/149‑1 (MQ=255) acaAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAAGAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGACGACaa > 2:753694/1‑149 (MQ=255) caAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACaaa < 1:3641934/149‑1 (MQ=255) caAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACaaa < 1:1252541/149‑1 (MQ=255) aacttGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACaaaa < 2:3456203/146‑1 (MQ=255) aaaTTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACaaaa > 2:184748/1‑149 (MQ=255) aaTTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACaaaaa > 1:1035332/1‑149 (MQ=255) aTTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACaaaaaa > 2:2269645/1‑149 (MQ=255) gggCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGa > 2:38581/1‑149 (MQ=255) ggCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGAt > 2:4083826/1‑149 (MQ=255) gCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATc > 2:3679245/1‑149 (MQ=255) ccGAACAACGCCCGTTGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCACCAACTTTCTTATATCCGCTTATACTGGCGAAGACAAAAAACGATcc < 1:1325029/149‑1 (MQ=255) ccGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATcc < 1:3902810/149‑1 (MQ=255) cGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCCATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCGTATACTGGCGAAGACAAACAACGATccc > 2:52796/1‑149 (MQ=255) gAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCa > 2:287078/1‑149 (MQ=255) gAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCa > 1:2018700/1‑149 (MQ=255) gAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCa < 2:887602/149‑1 (MQ=255) aacaacGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAg > 1:4719843/1‑149 (MQ=255) acaacGCCCGTAGTGGTACGCCATGACTGCGGAATATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGAAATTGTTGTCGCCGCTCCCAATTTCTGATATCCGCTTATACTGGCGAATACAAAAAACGATCCCAGc < 1:4415914/149‑1 (MQ=255) caacGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCa < 2:2092877/149‑1 (MQ=255) cGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGc < 2:4662459/149‑1 (MQ=255) gCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGcc > 1:4619944/1‑149 (MQ=255) cccGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCACTAGTTGTCGCCGCGCCCACAGTCTGATATCCGCTTAGACTGGCGAGGACAGAAAACGATCCCAGCAAGCCa > 2:497719/1‑149 (MQ=255) cccGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCa > 2:4489166/1‑149 (MQ=255) cGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAgg < 2:1917119/149‑1 (MQ=255) cGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAgg < 2:2383183/149‑1 (MQ=255) gTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGt < 2:2329462/149‑1 (MQ=255) tAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGta < 2:3940146/149‑1 (MQ=255) tAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGta > 1:4204265/1‑149 (MQ=255) ggTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAg < 1:4181854/149‑1 (MQ=255) aCGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAgtgt > 2:1635542/1‑149 (MQ=255) cGCCTTGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTc < 1:1655393/149‑1 (MQ=255) gCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTcc > 1:1455883/1‑149 (MQ=255) ccATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTcca > 2:1108362/1‑149 (MQ=255) tGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACAATCTGATATCCGCTGATACTGGCGAAGACAAACAACGATCCCAGCAAGCCAGGTATAAGTGTccacca > 2:2487107/1‑149 (MQ=255) gACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAg > 2:3098958/1‑149 (MQ=255) aCTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAgc > 1:681295/1‑149 (MQ=255) gATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTgg < 1:4724582/149‑1 (MQ=255) tatCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGac < 2:1062023/149‑1 (MQ=255) atCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGaca > 1:3310696/1‑149 (MQ=255) ccAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACAcc > 1:3145704/1‑149 (MQ=255) gCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGt < 2:1952933/149‑1 (MQ=255) tCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCg > 2:1227727/1‑149 (MQ=255) aGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGcc < 1:2766968/149‑1 (MQ=255) aGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGcc > 1:2461235/1‑149 (MQ=255) gACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGTGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCa > 2:1973128/1‑149 (MQ=255) gACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCa > 2:1973924/1‑149 (MQ=255) gACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCa > 2:3572763/1‑149 (MQ=255) ccAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAAccc < 1:3947319/149‑1 (MQ=255) aaTCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCACACCCCg > 1:817259/1‑149 (MQ=255) aTCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGc < 1:1897770/149‑1 (MQ=255) tCAGCTGACTGGCTACCAGTACAGCAATAGTTGTCGCCGCTCCCACTTTCTGATATCCGCTGATAATGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGcc < 1:2637916/149‑1 (MQ=255) tCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGcc < 1:4363671/149‑1 (MQ=255) tCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGcc > 1:2865915/1‑149 (MQ=255) tCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGcc < 1:565453/149‑1 (MQ=255) tCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGcc > 1:1835920/1‑149 (MQ=255) gcAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACAGTCGGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGGGTCCACCAGCGCACGCTGGACACCAGTTCGCCAACCCCCGcc < 2:2112165/148‑1 (MQ=255) acAGCTGACAGGCGACCAGTACAGCAATAGTAGTCGCCGCTCCCCCATTCTGATAGCCGCTGATACTGGCGACGACAAAAAACGATCCCAGCCAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGCCACCAGTTCGCCAAACcccccc < 2:2711371/148‑1 (MQ=255) cAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCa < 1:1126934/149‑1 (MQ=255) aGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCAt > 1:2162046/1‑149 (MQ=255) cTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTg < 1:49256/149‑1 (MQ=255) ggCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGtt < 2:2682629/149‑1 (MQ=255) ggCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGATGGACACCAGTTCGCCAAACCCCGCCATGCCTTGtt > 1:3557292/1‑149 (MQ=255) gACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTaa > 1:1811767/1‑149 (MQ=255) ccAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAAc > 1:3422968/1‑149 (MQ=255) aGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATaaaa > 1:3593304/1‑149 (MQ=255) gTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAAc < 1:4347079/149‑1 (MQ=255) gTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACaaa > 2:4368128/1‑149 (MQ=255) cgcTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGca < 2:2894735/149‑1 (MQ=255) gcTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGcac < 1:2434733/149‑1 (MQ=255) cTCCCACATTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGcaca > 2:1023014/1‑149 (MQ=255) tCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACaa < 1:4060663/149‑1 (MQ=255) tCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACaa > 1:2371286/1‑149 (MQ=255) tCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACaa > 1:3206510/1‑149 (MQ=255) ccACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATc < 2:2624530/149‑1 (MQ=255) ccACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATc > 1:4108694/1‑149 (MQ=255) cacaTTCTGATATCCGCTTATAGTGGCGAAGAAAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATcc < 1:3605358/149‑1 (MQ=255) acaTTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATccc > 1:3525338/1‑149 (MQ=255) acaTTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATccc < 2:33255/149‑1 (MQ=255) aTTCTGATATCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCcca < 1:2746324/149‑1 (MQ=255) tatCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGa < 2:175375/149‑1 (MQ=255) tatCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGa < 1:1973141/149‑1 (MQ=255) tatCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGa < 1:3572868/149‑1 (MQ=255) atCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAg < 1:2028580/149‑1 (MQ=255) atCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAg > 2:2929078/1‑149 (MQ=255) atCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAg > 2:2215914/1‑149 (MQ=255) tCCGCTTATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGt > 1:3749641/1‑149 (MQ=255) ccGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGtt < 1:3265945/149‑1 (MQ=255) ccGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGtt < 2:1423403/149‑1 (MQ=255) ccGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGtt < 1:3065428/149‑1 (MQ=255) cTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGTTCAg > 1:1199106/1‑149 (MQ=255) gATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGTTCAGCa > 1:1703001/1‑149 (MQ=255) gATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGTTCAGCa < 1:2064089/149‑1 (MQ=255) | CAAGTAAAATTGCGCCACAAATTGGGCCGAACAACGCCCGTAGTGGTACGCCATGACTGCGGAAGATATCCAGCATCAGACCGCCAATCAGCTGACTGGCGACCAGTACAGCAATAGTTGTCGCCGCTCCCACATTCTGATATCCGCTGATACTGGCGAAGACAAAAAACGATCCCAGCAAGCCAGGTATAAGTGTCCACCAGCGCACGCTGGACACCAGTTCGCCAAACCCCGCCATGCCTTGTTTAAACCATAAAATAGAAACAAAGAGCACAATCCCCACCAGTGAGTTCAGCA > CP009273/1512177‑1512473 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |