| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,534,409 | G→T | 88.2% | V813V (GTC→GTA) | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,534,409 | 0 | G | T | 88.2% | 763.5 / 102.1 | 312 | V813V (GTC→GTA) | narZ | nitrate reductase 2 (NRZ), alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (13/24); new base T (151/123); total (165/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.42e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
Only 100 of 316 total aligned reads displayed.
GAGAGCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAGCT > CP009273/1534266‑1534557 | gagaGCTCTGCCGGAGAGTCATGCCGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACCCGTGCGACAAAGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGGGAGTCCCCCGCCGGATATAccgc > 2:2799018/1‑149 (MQ=255) agagCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTAccgcc < 2:1253323/149‑1 (MQ=255) ctctGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTACCACGCCCGATCTACCGCCGCAg > 1:1653903/1‑149 (MQ=255) ctctGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGGGATTCCCACGCCGGATCTACcgccgccg > 1:2032067/1‑147 (MQ=255) cGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCATGCCGGATCTACCGCCGCAGAAAGCg < 2:843560/149‑1 (MQ=255) ggAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCgg < 1:3956533/149‑1 (MQ=255) gagaGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGa < 2:3773794/149‑1 (MQ=255) agagTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGAt < 2:2384414/149‑1 (MQ=255) gagTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATg > 2:1708828/1‑149 (MQ=255) gagTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATg < 1:3767577/149‑1 (MQ=255) tCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAAt < 2:698617/149‑1 (MQ=255) gCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAAc < 1:1156009/149‑1 (MQ=255) gCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAAc < 2:2894931/149‑1 (MQ=255) aGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACgg > 2:579806/1‑149 (MQ=255) tAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGAt < 1:216492/149‑1 (MQ=255) ggggTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGc < 1:1087454/149‑1 (MQ=255) gggTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCa < 2:1970083/149‑1 (MQ=255) gTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCata < 2:2504049/149‑1 (MQ=255) gTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCata < 2:371237/149‑1 (MQ=255) tGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCatata < 2:4379718/149‑2 (MQ=255) tGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCatata < 2:1989575/149‑2 (MQ=255) gTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATcc < 2:1867261/149‑1 (MQ=255) aaTACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGa < 1:1547529/149‑1 (MQ=255) tACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAgg < 1:4436720/149‑1 (MQ=255) tACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAgg < 1:2051664/149‑1 (MQ=255) tACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCAACCGCCGCAGAAAGCGGCTGAATAAACGGATGCAAATCCGAgg > 1:2921678/1‑149 (MQ=255) aCCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACATGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTACCACGCCCGATCTACCCCCGCAGAAATCGGCTGAATAAAACGATGCATATACGAGgt > 1:1756666/1‑149 (MQ=25) cACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGCTACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCCCAGAAAGCGGATGAATAAACGGATGCATATCCGAGgtgt > 2:2127248/1‑149 (MQ=255) aCGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGtt < 2:3297266/149‑1 (MQ=255) cGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTc > 2:3925263/1‑149 (MQ=255) cGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTc < 1:3850177/149‑1 (MQ=255) gTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCa < 2:723511/149‑1 (MQ=255) gTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCa < 1:4514276/149‑1 (MQ=255) tCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCat > 1:1384800/1‑149 (MQ=255) ggTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCatat < 1:1374850/149‑1 (MQ=255) tttCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCg > 1:665720/1‑149 (MQ=255) tCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTc < 1:1855322/149‑1 (MQ=255) cTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCt < 1:421427/149‑1 (MQ=255) tttGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCtt > 2:2435247/1‑149 (MQ=255) tttGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCtt < 2:4665562/149‑1 (MQ=255) tttGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCtt > 1:769555/1‑149 (MQ=255) tGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCtttt > 2:3230712/1‑149 (MQ=255) ccAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTc < 1:1046436/149‑1 (MQ=255) aaGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAAAGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGt > 1:2131729/1‑149 (MQ=255) aCCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAgg < 2:345015/149‑1 (MQ=255) cACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTgg > 1:2589276/1‑149 (MQ=255) gCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCgg > 2:3797723/1‑149 (MQ=255) gCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCgg < 2:4332650/149‑1 (MQ=255) cacaCTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGt < 1:546833/149‑1 (MQ=255) acTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTggg > 1:3082777/1‑149 (MQ=255) ttGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCa > 2:917498/1‑149 (MQ=255) ttGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCa < 2:3625891/149‑1 (MQ=255) aaaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACg > 2:3088096/1‑149 (MQ=255) aaaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACg < 1:2917123/149‑1 (MQ=255) aaaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTAGTACCAGGTGGCGGTGGGCAGAACg > 1:2826054/1‑149 (MQ=255) aaaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTAGTAACAGGTGGCGGTGGGGAGAACg > 1:3199606/1‑149 (MQ=255) aaaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGa < 1:2226443/149‑1 (MQ=255) aaaTGCTTTGGCGATACCTTTGTAGATATCCCAGTAGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGa > 1:3415016/1‑149 (MQ=255) aaTGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGat > 1:4615609/1‑149 (MQ=255) cTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCg < 2:1326667/149‑1 (MQ=255) cTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAAAGGATGCATATCCGAGGTGTTCATATCGTCTTTTTAGTACCACGTGGCGGTGGGCAGAACGATATCg > 1:1356577/1‑149 (MQ=255) tGGCGATACCTTTGTAGATGTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGgag < 1:171156/149‑1 (MQ=255) gATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAca > 2:3372630/1‑149 (MQ=255) gATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAca > 2:1540199/1‑149 (MQ=255) gATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAca > 2:1539686/1‑149 (MQ=255) gATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAca > 2:2626572/1‑149 (MQ=255) aTACCTTTGTAGATTTCCCAGTCGCTTCGTGATTCACACGCCGGATCTAACGCCGCAGAAATCGGATGAATAAACGGATGCATATACGAGGTGTTAATATCGTCTTTTTAGTACCAGGTGGCGGTGGGCAGAAAGATATAGGAGAAcag > 1:3537168/1‑149 (MQ=21) aCCTTTGTAGATGTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggc < 1:3445450/149‑1 (MQ=255) ccTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggca < 2:1895469/149‑1 (MQ=255) tttGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcagg > 2:2368786/1‑149 (MQ=255) tttGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAAcaggcagg > 2:3128016/1‑149 (MQ=255) gTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTAGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTAc < 1:1202701/149‑1 (MQ=255) gATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTgg > 2:2542703/1‑149 (MQ=255) gATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTgg > 1:4185774/1‑149 (MQ=255) gATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTgg < 2:4216746/149‑1 (MQ=255) gATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATATACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTgg > 1:2320228/1‑149 (MQ=255) aTTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGa < 2:4649466/149‑1 (MQ=255) aTTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGa > 2:2826297/1‑149 (MQ=255) aTTTCCCAGTCGCTGCGTGAGTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGa < 1:2502295/149‑1 (MQ=255) tttCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGAc > 2:1034686/1‑149 (MQ=255) ttCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACa > 1:2702337/1‑149 (MQ=255) tCCCAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACAt > 2:4048509/1‑149 (MQ=255) cccAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATg > 2:1490125/1‑149 (MQ=255) cAGTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAAAGGATGCAAATACGAGGTGTTAATATCGTCTTTTTCGTAACAGGTGGCGGTGGGCATAACGATATCGGAGAAAAGGCAGGTACTGGACATGCg > 1:3365714/1‑149 (MQ=255) gTCGCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGa > 1:2127522/1‑149 (MQ=255) tCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGaa < 1:2276551/149‑1 (MQ=255) gCTGCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGt > 1:4590643/1‑149 (MQ=255) gCGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGa > 2:781613/1‑149 (MQ=255) cGTGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAg < 2:3414493/149‑1 (MQ=255) tGATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCg > 1:3898853/1‑149 (MQ=255) gATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGt > 2:1137740/1‑149 (MQ=255) gATTCCCACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGt > 1:1512923/1‑149 (MQ=255) cACGCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACcag < 2:2964650/149‑1 (MQ=255) gCCGGATCTACCGCCGCAGAAAGCGGATGAATACACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACcagcag < 2:4555523/149‑1 (MQ=255) gCCGGATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACcagcag > 1:4356874/1‑149 (MQ=255) cGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGt < 2:3871454/149‑1 (MQ=255) ggATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTc < 2:4719366/149‑1 (MQ=255) gATCTACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCg > 1:1932877/1‑149 (MQ=255) gACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAGCt > 1:1970682/1‑149 (MQ=255) gACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAGCt > 1:2545559/1‑149 (MQ=255) | GAGAGCTCTGCCGGAGAGTCATGCAGTAGGGGTTGTAATACCACGTCGGTTTCTTTGCCAAGATGACCCACGCACACTTGCGAAAATGCTTTGGCGATACCTTTGTAGATTTCCCAGTCGCTGCGTGATTCCCACGCCGGATCGACCGCCGCAGAAAGCGGATGAATAAACGGATGCATATCCGAGGTGTTCATATCGTCTTTTTCGTACCAGGTGGCGGTGGGCAGAACGATATCGGAGAACAGGCAGGTACTGGACATGCGGAAGTCGAGCGTCACCAGCAGGTCGAGCT > CP009273/1534266‑1534557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |