Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,618,960 A→C 6.7% intergenic (‑206/‑70) ydeI ← / → ydeJ hydrogen peroxide resistance OB fold protein; putative periplasmic protein/inactive PncC family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,618,9600AC 6.7% 797.5 / 49.0 285intergenic (‑206/‑70)ydeI/ydeJhydrogen peroxide resistance OB fold protein; putative periplasmic protein/inactive PncC family protein
Reads supporting (aligned to +/- strand):  ref base A (130/134);  new base C (9/10);  total (139/146)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.08e-01

Only 100 of 295 total aligned reads displayed.

TTGCCAAATAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAA  >  CP009273/1618812‑1619108
                                                                                                                                                    |                                                                                                                                                    
 tGCCAAATAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGaaaa                                                                                                                                                     <  2:2966324/149‑1 (MQ=255)
  gCCAAATAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAat                                                                                                                                                    <  2:3848591/149‑1 (MQ=255)
     aaaTAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAattat                                                                                                                                                 <  2:4751152/149‑1 (MQ=255)
       aTAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCTCTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAAttatta                                                                                                                                               <  1:2375081/149‑1 (MQ=255)
       aTAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAAttatta                                                                                                                                               >  1:1200057/1‑149 (MQ=255)
          aGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTatat                                                                                                                                            >  1:4107611/1‑149 (MQ=255)
          aGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTatat                                                                                                                                            >  1:1918623/1‑149 (MQ=255)
           gAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAACATTATTATAtt                                                                                                                                           <  2:1011085/149‑1 (MQ=255)
           gAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATAtt                                                                                                                                           <  1:3785404/149‑1 (MQ=255)
           gAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATAtt                                                                                                                                           >  2:3416660/1‑149 (MQ=255)
            aaTATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTg                                                                                                                                          <  2:505207/149‑1 (MQ=255)
              tatTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGa                                                                                                                                        <  2:1633213/149‑1 (MQ=255)
               atTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGAc                                                                                                                                       >  1:1873116/1‑149 (MQ=255)
               atTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGAc                                                                                                                                       <  2:277066/149‑1 (MQ=255)
               atTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGAc                                                                                                                                       <  1:1442969/149‑1 (MQ=255)
                ttGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACg                                                                                                                                      <  2:2362391/149‑1 (MQ=255)
                ttGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACg                                                                                                                                      >  2:1933075/1‑149 (MQ=255)
                  gCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAg                                                                                                                                    <  1:1699551/149‑1 (MQ=255)
                   ccAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGc                                                                                                                                   >  2:3621374/1‑149 (MQ=255)
                    cAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAACATTATTATATTGGACGAGCa                                                                                                                                  >  1:2956469/1‑149 (MQ=255)
                      aTTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATa                                                                                                                                <  1:2211372/149‑1 (MQ=255)
                          ttATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGa                                                                                                                            >  1:4191009/1‑149 (MQ=255)
                             taAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGgaaa                                                                                                                         >  2:547669/1‑149 (MQ=255)
                               aGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAg                                                                                                                       >  1:4727625/1‑149 (MQ=255)
                                  cATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCaa                                                                                                                    >  2:3224322/1‑149 (MQ=255)
                                    tttAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAAt                                                                                                                  >  1:3397423/1‑149 (MQ=255)
                                     ttAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATc                                                                                                                 <  2:4557800/149‑1 (MQ=255)
                                       aaaaTCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCAc                                                                                                               >  2:3264112/1‑149 (MQ=255)
                                        aaaTCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCAcc                                                                                                              <  2:313804/149‑1 (MQ=255)
                                          aTCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCtt                                                                                                            <  2:3175430/149‑1 (MQ=255)
                                              gCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACa                                                                                                        <  2:1529535/149‑1 (MQ=255)
                                              gCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACa                                                                                                        >  1:66715/1‑149 (MQ=255)
                                              gCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACa                                                                                                        <  1:434294/149‑1 (MQ=255)
                                                cAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACata                                                                                                      <  1:932348/149‑1 (MQ=255)
                                                 aaCTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACatat                                                                                                     >  2:603562/1‑149 (MQ=255)
                                                     aGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATaaaa                                                                                                 <  1:2635368/149‑1 (MQ=255)
                                                      gCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAACATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAg                                                                                                <  2:2254422/149‑1 (MQ=255)
                                                        tGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCg                                                                                              <  2:4198643/149‑1 (MQ=255)
                                                          tCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTg                                                                                            >  2:2310988/1‑149 (MQ=255)
                                                            aaaTATACAGAGAATTTAACTCACTAAATTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGa                                                                                          <  2:2557410/149‑1 (MQ=255)
                                                             aaTATAAATAGAATTTAACTCACTAAAGTTAAGAATATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGAc                                                                                         <  2:466640/149‑1 (MQ=255)
                                                                 taCAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACaaaa                                                                                     >  1:100306/1‑149 (MQ=255)
                                                                  aCAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACaaaaa                                                                                    >  2:3957465/1‑149 (MQ=255)
                                                                  aCAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACaaaaa                                                                                    <  1:2048534/149‑1 (MQ=255)
                                                                    agagAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAAc                                                                                  >  1:3199195/1‑149 (MQ=255)
                                                                       taaTTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGt                                                                               <  2:692553/148‑1 (MQ=255)
                                                                       gaATTTAACTCACTAAAGTTAATAAGATTGAAAAGTCTTAAAAATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGt                                                                               <  2:1554491/149‑1 (MQ=255)
                                                                       gaATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGt                                                                               <  2:1809322/149‑1 (MQ=255)
                                                                        aaTTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAACATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTg                                                                              >  1:2536403/1‑149 (MQ=255)
                                                                        aaTTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTg                                                                              <  2:267021/149‑1 (MQ=255)
                                                                        aaTTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTg                                                                              <  2:267184/149‑1 (MQ=255)
                                                                          tttAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGaa                                                                            <  1:1395723/149‑1 (MQ=255)
                                                                           ttAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAACATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAAc                                                                           <  1:1597013/149‑1 (MQ=255)
                                                                              aCTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACAtt                                                                        <  1:2869932/149‑1 (MQ=255)
                                                                                tCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTaa                                                                      >  1:477741/1‑149 (MQ=255)
                                                                                 cACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAAt                                                                     >  2:3866049/1‑149 (MQ=255)
                                                                                  aCTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATa                                                                    <  1:1069103/149‑1 (MQ=255)
                                                                                    tAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATaga                                                                  >  2:1104512/1‑149 (MQ=255)
                                                                                     aaaGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATagag                                                                 >  2:1207292/1‑149 (MQ=255)
                                                                                     aaaGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATagag                                                                 >  1:45690/1‑149 (MQ=255)
                                                                                        gTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATa                                                              >  1:208379/1‑149 (MQ=255)
                                                                                        gTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATa                                                              >  1:3267998/1‑149 (MQ=255)
                                                                                         ttAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGTACAAAAAACAGTGAACATTAATAGAGATaa                                                             >  1:1307859/1‑149 (MQ=255)
                                                                                                gaTTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTa                                                      >  1:2860162/1‑149 (MQ=255)
                                                                                                   tGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAACATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACaa                                                   <  2:2536403/149‑1 (MQ=255)
                                                                                                   tGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACaa                                                   >  2:211524/1‑149 (MQ=255)
                                                                                                    gAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAAc                                                  <  2:907299/149‑1 (MQ=255)
                                                                                                     aaaaGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACt                                                 <  2:2858967/149‑1 (MQ=255)
                                                                                                       aaGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAATACAGTGAACATTAATAGAGATCAAAGTGTACAACTTg                                               >  2:3764272/1‑149 (MQ=255)
                                                                                                       aaGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTg                                               >  1:4647629/1‑149 (MQ=255)
                                                                                                        attCTTAAAAATATTTTCATAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGt                                              <  2:1307859/147‑1 (MQ=255)
                                                                                                          tCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGTACATTAATAGAGATCAAATTGTCCAAGTTGtcg                                            >  2:4329579/1‑147 (MQ=255)
                                                                                                           cTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGa                                           <  1:846332/149‑1 (MQ=255)
                                                                                                           cTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGa                                           <  2:3645336/149‑1 (MQ=255)
                                                                                                           cTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGa                                           <  1:3895237/149‑1 (MQ=255)
                                                                                                           cTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGa                                           <  1:1721526/149‑1 (MQ=255)
                                                                                                            ttAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGAt                                          <  2:1396304/149‑1 (MQ=255)
                                                                                                              aaaCATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATAc                                        >  2:2911109/1‑149 (MQ=255)
                                                                                                              aaaCATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATAc                                        <  1:2321975/149‑1 (MQ=255)
                                                                                                                 cATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGa                                     <  1:3586430/149‑1 (MQ=255)
                                                                                                                 cATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGa                                     >  2:3504216/1‑149 (MQ=255)
                                                                                                                 cATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGa                                     >  1:4485565/1‑149 (MQ=255)
                                                                                                                       ttCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTAt                               <  1:2694534/149‑1 (MQ=255)
                                                                                                                        tCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTAtt                              >  1:2821270/1‑149 (MQ=255)
                                                                                                                        tCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTAtt                              <  2:4167694/149‑1 (MQ=255)
                                                                                                                           gAATAATCGGATTTATATGTTTGAAAATTATTATATAGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGaa                           >  1:3333253/1‑149 (MQ=255)
                                                                                                                             ataatCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGaaaa                         <  1:3988730/149‑1 (MQ=255)
                                                                                                                             ataatCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGaaaa                         >  1:2218729/1‑149 (MQ=255)
                                                                                                                                atCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCt                      >  1:2182765/1‑149 (MQ=255)
                                                                                                                                    gATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACa                  <  1:3708321/149‑1 (MQ=255)
                                                                                                                                       ttATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATcc               <  2:2700628/149‑1 (MQ=255)
                                                                                                                                          tatGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCcgcg            >  1:4542033/1‑149 (MQ=255)
                                                                                                                                           atGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGt           <  2:2399321/149‑1 (MQ=255)
                                                                                                                                            tGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGtt          >  2:439533/1‑149 (MQ=255)
                                                                                                                                             gTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTg         >  2:287592/1‑149 (MQ=255)
                                                                                                                                              tttGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGTACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGa        <  2:4107611/149‑1 (MQ=255)
                                                                                                                                              tttGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGa        <  1:1345917/149‑1 (MQ=255)
                                                                                                                                                tGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGt      <  2:3793851/149‑1 (MQ=255)
                                                                                                                                                tGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGt      >  1:3128700/1‑149 (MQ=255)
                                                                                                                                                 gAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTc     <  1:2445785/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TTGCCAAATAAGAATATTGCCAATTGTTATAAGGCATTTAAAATCAGCCAACTAGCTGTCAAATATACAGAGAATTTAACTCACTAAAGTTAAGAAGATTGAAAAGTCTTAAACATATTTTCAGAATAATCGGATTTATATGTTTGAAAATTATTATATTGGACGAGCATACAGAAAAAGCAAATCACCTTTACATATAAAAGCGTGGACAAAAAACAGTGAACATTAATAGAGATAAAATTGTACAACTTGTAGATACCGATACTATTGAAAACCTGACATCCGCGTTGAGTCAAA  >  CP009273/1618812‑1619108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: