| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,823,835 | A→C | 7.3% | W53G (TGG→GGG) | astD ← | succinylglutamic semialdehyde dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,823,835 | 0 | A | C | 7.3% | 647.8 / 2.2 | 284 | W53G (TGG→GGG) | astD | succinylglutamic semialdehyde dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (161/86); new base C (3/27); total (164/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 285 total aligned reads displayed.
CATCGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTAATCCAT > CP009273/1823689‑1823983 | tcGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAgcgc > 1:3317757/1‑149 (MQ=255) gCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCgg > 2:3259692/1‑149 (MQ=255) ccGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGa > 1:3074837/1‑149 (MQ=255) ccGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGa < 1:575612/149‑1 (MQ=255) cGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGaa > 1:3738366/1‑149 (MQ=255) gTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGaaa > 2:4681397/1‑149 (MQ=255) tCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAc < 2:2978138/149‑1 (MQ=255) cACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcg > 1:2611866/1‑149 (MQ=255) aCTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcgc < 2:3809641/149‑1 (MQ=255) aCTTCGGTTGCCGCTGCCCCGCGCGGCTTACCCGTTTCTCGGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACACCGGCA‑TGACGTTCCGCAAATCAAAGCCGCGCCCCGCGCGGAAAcgc < 1:2152867/149‑1 (MQ=255) cTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCAGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAAcgcc > 2:4709788/1‑149 (MQ=255) cGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCa > 1:467704/1‑149 (MQ=255) gTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACg > 2:866212/1‑149 (MQ=255) gTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACg > 1:1256993/1‑149 (MQ=255) tCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAACGCCGCACGGGCTGCCCg > 2:2823608/1‑149 (MQ=255) tCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCg > 1:3923909/1‑149 (MQ=255) tCCCAGCGCGGCTAACCCGTTTCTCTGGAAATAATCGCGTTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGAT‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCg < 2:571900/149‑1 (MQ=255) cccAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGa > 1:2666577/1‑149 (MQ=255) cccAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGa > 1:2994856/1‑149 (MQ=255) cccAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGa > 1:1547727/1‑149 (MQ=255) gcgGATAACCCTTTTCTCTGGCAATAATCGGGGTTATTTCGGCTTTATTGCTTTCCTGCTGTGCGGCAAAGCGTT‑CGAAAACGGCA‑TTACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGcc < 1:4366188/149‑1 (MQ=255) ggCTTACCCGTTTCTCTGGCAATAATCGCGTTTAATTCGGCTTTATTGCTTTCCAGCTGTGCGGCAACGGGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTg < 2:1004454/149‑1 (MQ=255) aCCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGa > 1:3684519/1‑149 (MQ=255) cccGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGAc > 1:2029492/1‑149 (MQ=255) tttCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGa > 1:4131238/1‑149 (MQ=255) tttCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGa < 2:2769950/149‑1 (MQ=255) ctGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggc > 1:1652362/1‑149 (MQ=255) ctGGAAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAACGCGTT‑CGACAACGGAA‑TGACGTTCAGAAAATTAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggc < 1:1188689/149‑1 (MQ=255) ggatataatCGCGTTTATTTGGTCTTTTTTGCTGTCCAGCAGTGCGGAAATGGGTT‑GGACAACGGAT‑TGACTTTCAGAATTTAAAAGCGGCGCCCTGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcat < 2:3998310/145‑1 (MQ=255) ggCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcat > 2:974937/1‑149 (MQ=255) ggCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcat > 1:775719/1‑149 (MQ=255) gCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcatc > 1:1339210/1‑149 (MQ=255) ataatCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGcggcatcggc > 2:3202216/1‑149 (MQ=255) gcgcgGTTAATGCGGCTTTTGTGCTTGCCAGCGGTGCGGCAACGGGTT‑GTCCACCGGCA‑TGAGTTACCCAAAATTAACCCCGCGCCCCGCGGGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGcatca < 1:637570/148‑1 (MQ=255) ggggTTAATGCGGCTTTTTTGGTTTCCAGCTGTGCGGCAAAGGTTT‑CGACACGGGAA‑TGACTTACACCAAAGAAAAGCCGCGCCCCGCGGGCAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAtt < 1:4191413/147‑1 (MQ=255) ggTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgc > 1:2747956/1‑149 (MQ=255) tttATTTCGGTTTTTTTGCTTTCCTGCTGTGC‑GCAAACGGTTGCGACACCGGAA‑TGACGTCCACCAATTCAACCCCGCCCCCCCCGCGCAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgcc < 1:3722989/148‑1 (MQ=255) gTTATTTGGGCTTTTTGGCTTCCCCGCTGTGCGGAAACGCTTT‑CGA‑AACGGCATTGACGTTCAGCAAATCAAAGCCGCGCCCCGCGCGCACACGCCGCACTGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgcc < 1:2270583/149‑1 (MQ=255) aaTTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgccttg > 1:4244639/1‑149 (MQ=255) ttCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCAttgccttgcc > 1:4450550/1‑149 (MQ=255) cGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCAt > 2:1678102/1‑149 (MQ=255) gCTTTCTTGCTTTCCCGCAGTGCGGCAACGCGTT‑CGACACCGGCA‑TGACTTTCAGCAAATGAAAGCCGCGCCCCGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATaa < 2:4449799/149‑1 (MQ=255) gCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATaa > 1:2342835/1‑149 (MQ=255) gCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATaa > 2:4182636/1‑149 (MQ=255) gCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATaa > 2:3723153/1‑149 (MQ=255) tttATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAaca > 1:2418082/1‑149 (MQ=255) tttttGCTTTCCAGCTGGGCGGCAAAGCGTT‑CGACAACGGCT‑TGACGTTCCGCAAATGAAAGCCGCGCCCCGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTAGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAacac < 2:1337742/146‑1 (MQ=255) tATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACAcc > 2:219495/1‑149 (MQ=255) ttGCTTTCCAGCAGTGCGGAAAAGCGTA‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGTAATCGGCATCATTGCCTTGCCATAACACCTc < 2:1190770/149‑1 (MQ=255) tttCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGccc > 1:817692/1‑149 (MQ=255) tttCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGccc > 2:2664833/1‑149 (MQ=255) ccAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGAt > 2:738181/1‑149 (MQ=255) cagcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATa > 2:4210091/1‑149 (MQ=255) cagcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATa > 2:1819445/1‑149 (MQ=255) cagcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTAGCCATAACACCTCGCCCGATa > 2:2993721/1‑149 (MQ=255) agcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATAc > 1:882420/1‑149 (MQ=255) agcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATAc < 2:1991551/149‑1 (MQ=255) gcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATAcc < 2:3452476/149‑1 (MQ=255) gcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATAcc > 1:1784410/1‑149 (MQ=255) gcagTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATAcc < 2:2567490/149‑1 (MQ=255) gTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGa > 2:2162363/1‑149 (MQ=255) tGCGGCAATGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGAt < 2:3702356/149‑1 (MQ=255) ggCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTAc > 2:2094098/1‑149 (MQ=255) ggCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTAc < 2:1540676/149‑1 (MQ=255) aaaaGCTTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGc < 2:3871560/148‑1 (MQ=255) aaGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCtt > 2:4146399/1‑149 (MQ=255) aGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTc > 2:4099089/1‑149 (MQ=255) gTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTcaca > 1:2356808/1‑149 (MQ=255) tt‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCacac < 2:4193361/149‑1 (MQ=255) tt‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCacac > 2:3132160/1‑149 (MQ=255) t‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGAGTACGCTTCACAcg > 1:47661/1‑149 (MQ=255) cAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGAt < 2:1256993/149‑1 (MQ=255) cAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGAt > 1:4587292/1‑149 (MQ=255) cAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGAt > 2:3291170/1‑149 (MQ=255) accGGAA‑TGACGTTAAGAATATTAAAGCGGCGCCCCGGGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATg < 1:4699229/147‑1 (MQ=255) ccGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgc < 2:4750618/148‑1 (MQ=255) aCGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATgc > 1:3410313/1‑149 (MQ=255) a‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCt < 1:1116519/149‑1 (MQ=255) ttGACGTTCAGCAAATGAAAGCCGCGCCCTGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCt < 1:3503807/148‑1 (MQ=255) gACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTgg < 2:4362222/149‑1 (MQ=255) tCAGCAAATGAAAGCCGCGCCCTGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGt < 2:3228362/149‑1 (MQ=255) aGCAAATGAAAGCCGCGCCCAGCGCGGACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTa < 2:4391466/149‑1 (MQ=255) gCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTAt > 2:2377373/1‑149 (MQ=255) aaTGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCa > 1:4029739/1‑149 (MQ=255) aaTGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCa > 1:482180/1‑149 (MQ=255) aTGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAg > 2:2939908/1‑149 (MQ=255) tGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGt < 1:1109278/149‑1 (MQ=255) tGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGt > 1:2801701/1‑149 (MQ=255) tGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGt > 2:1072397/1‑149 (MQ=255) gAAAGCCGCGCCCAGCGCGTACACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTc < 1:3259550/149‑1 (MQ=255) gAAAGCCGCGCCCAGCGCGTAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTc < 1:3259681/149‑1 (MQ=255) aaGCCGCGCCCCGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCAc < 1:1837563/149‑1 (MQ=255) aGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCAcc > 2:2029928/1‑149 (MQ=255) gCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACCAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 2:3551601/149‑1 (MQ=255) gCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 2:195963/149‑1 (MQ=255) gCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 2:499808/149‑1 (MQ=255) gCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCg < 2:3551638/149‑1 (MQ=255) cgcCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTaa < 2:4518195/149‑1 (MQ=255) cgcCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATAATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTaa < 2:3235995/149‑1 (MQ=255) ccAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTCATcc > 2:1303272/1‑149 (MQ=255) | CATCGCCGTCACTTCGGTTGCCGCTTCCCAGCGCGGCTTACCCGTTTCTCTGGCAATAATCGCGGTTAATTCGGCTTTATTGCTTTCCAGCAGTGCGGCAAAGCGTT‑CGACAACGGCA‑TGACGTTCAGCAAATGAAAGCCGCGCCCAGCGCGGAAACGCCGCACGGGCTGCCCGACAAGCCTGCTCGACCTGAGCGGCATCGGCATCATTGCCTTGCCATAACACCTCGCCCGATACCGGATTACGCTTCACACGCGATGCGCCCTGGCCCGTTATCCAGTCACCGTTAATCCAT > CP009273/1823689‑1823983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |